MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-216E12
Chromosome	8 (Build37)	14 (Build37)
Map Location	90,568,170 - 90,569,197	27,702,990 - 27,703,457
singlet/doublet	singlet	singlet
Overlap gene	LOC100040328
Upstream gene	EG625298, EG330819, Cbln1, LOC100040294, 4933402J07Rik, Zfp423
Downstream gene	5033428A16Rik, Heatr3, Papd5, Adcy7, Brd7, LOC100040369, Nkd1, 9130017C17Rik, Nod2, Cyld, LOC675985, Sall1, LOC100041089
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG625298 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:625298 MGI:3647042
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 1246 ESTs, 6 Proteins

name	EG330819 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330819 MGI:3645880
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Cbln1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12404 MGI:88281
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040294 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040294
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	4933402J07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330820 MGI:3607717
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zfp423 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94187 MGI:1891217
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040328 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040328
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	5033428A16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382030 MGI:1921981
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Heatr3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234549 MGI:2444491
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Papd5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214627 MGI:1917820
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 162 ESTs, 5 Proteins

name	Adcy7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11513 MGI:102891
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Brd7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26992 MGI:1349766
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040369 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040369
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins

name	Nkd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93960 MGI:2135954
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9130017C17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71607 MGI:1918857
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nod2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:257632 MGI:2429397
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cyld (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74256 MGI:1921506
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC675985 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:675985
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 993 ESTs, 7 Proteins

name	Sall1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58198 MGI:1889585
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041089 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041089
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	EG625298 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94383722 GeneID:625298 MGI:3647042
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 1246 ESTs, 6 Proteins product : predicted gene, EG625298 transcript_id : XM_889857.2

name	EG330819 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149258980 GeneID:330819 MGI:3645880
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : predicted gene, EG330819 transcript_id : XM_898721.3

name	Cbln1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133506687 GeneID:12404 MGI:88281
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cerebellin 1 precursor protein transcript_id : NM_019626.3

name	LOC100040294 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258969 GeneID:100040294
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040294 transcript_id : XM_001474448.1

name	4933402J07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802382 GeneID:330820 MGI:3607717
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4933402J07 gene transcript_id : NM_177901.3

name	Zfp423 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46359076 GeneID:94187 MGI:1891217
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 423 transcript_id : NM_033327.2

name	LOC100040328 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258971 GeneID:100040328
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : hypothetical protein LOC100040328 transcript_id : XM_001474508.1

name	5033428A16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142343892 GeneID:382030 MGI:1921981
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5033428A16 gene transcript_id : NM_029074.2

name	Heatr3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40789300 GeneID:234549 MGI:2444491
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : HEAT repeat containing 3 transcript_id : NM_172757.3

name	Papd5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149258973 GeneID:214627 MGI:1917820
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 162 ESTs, 5 Proteins product : PAP associated domain containing 5, transcript variant 1 transcript_id : XM_134422.9

name	Adcy7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680645 GeneID:11513 MGI:102891
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adenylate cyclase 7 transcript_id : NM_007406.1

name	Adcy7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802403 GeneID:11513 MGI:102891
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adenylate cyclase 7 transcript_id : NM_001037723.2

name	Adcy7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142377895 GeneID:11513 MGI:102891
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adenylate cyclase 7 transcript_id : NM_001037724.2

name	Brd7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755233 GeneID:26992 MGI:1349766
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bromodomain containing 7 transcript_id : NM_012047.1

name	LOC100040369 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258975 GeneID:100040369
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins product : similar to retinitis pigmentosa GTPase regulator interacting protein 1 transcript_id : XM_001474559.1

name	Nkd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31980621 GeneID:93960 MGI:2135954
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : naked cuticle 1 homolog (Drosophila) transcript_id : NM_027280.2

name	9130017C17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350367 GeneID:71607 MGI:1918857
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9130017C17 gene transcript_id : NM_027840.2

name	Nod2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83977453 GeneID:257632 MGI:2429397
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleotide-binding oligomerization domain containing 2 transcript_id : NM_145857.2

name	Cyld (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27734059 GeneID:74256 MGI:1921506
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cylindromatosis (turban tumor syndrome) transcript_id : NM_173369.1

name	LOC675985 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258985 GeneID:675985
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 993 ESTs, 7 Proteins product : similar to ribosomal protein S6 transcript_id : XM_001476577.1

name	Sall1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:45598370 GeneID:58198 MGI:1889585
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sal-like 1 (Drosophila) transcript_id : NM_021390.2

name	LOC100041089 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258989 GeneID:100041089
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC100041089 transcript_id : XM_001476646.1

name	EG625298 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82918165 GeneID:625298 MGI:3647042
definition	codon_start : 1 product : hypothetical protein protein_id : XP_894950.1

name	EG330819 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82918167 GeneID:330819 MGI:3645880
definition	codon_start : 1 product : hypothetical protein protein_id : XP_903814.1

name	Cbln1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56744247 CCDS:CCDS22506.1 GeneID:12404 MGI:88281
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0045202 - synapse [Evidence IEA]; GO:0019717 - synaptosome [Evidence IEA] codon_start : 1 product : cerebellin 1 precursor protein protein_id : NP_062600.2

name	LOC100040294 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258970 GeneID:100040294
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474498.1

name	4933402J07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244532 GeneID:330820 MGI:3607717
definition	codon_start : 1 product : hypothetical protein LOC330820 protein_id : NP_808569.1

name	Zfp423 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46359077 GeneID:94187 MGI:1891217
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : early B-cell factor associated zinc finger transcription factor; zinc finger protein 104; early B-cell factor associated zinc finger protein product : zinc finger protein 423 protein_id : NP_201584.2

name	LOC100040328 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258972 GeneID:100040328
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474558.1

name	5033428A16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47058954 GeneID:382030 MGI:1921981
definition	codon_start : 1 product : hypothetical protein LOC382030 protein_id : NP_083350.1

name	Heatr3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40789301 CCDS:CCDS22508.1 GeneID:234549 MGI:2444491
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : HEAT repeat containing 3 protein_id : NP_766345.3

name	Papd5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149258974 GeneID:214627 MGI:1917820
definition	codon_start : 1 product : similar to PAP-associated domain-containing protein 5 (Topoisomerase-related function protein 4-2) (TRF4-2) isoform 1 protein_id : XP_134422.8

name	Adcy7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83582786 CCDS:CCDS22509.1 GeneID:11513 MGI:102891
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence TAS] GO_function : GO:0004016 - adenylate cyclase activity [Evidence TAS]; GO:0016829 - lyase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016849 - phosphorus-oxygen lyase activity [Evidence IEA] GO_process : GO:0007190 - adenylate cyclase activation [Evidence TAS]; GO:0006171 - cAMP biosynthesis [Evidence TAS]; GO:0009190 - cyclic nucleotide biosynthesis [Evidence IEA]; GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 exception : mismatches in translation note : adenylyl cyclase type VII product : adenylate cyclase 7 protein_id : NP_001032812.1

name	Adcy7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83582788 CCDS:CCDS22509.1 GeneID:11513 MGI:102891
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence TAS] GO_function : GO:0004016 - adenylate cyclase activity [Evidence TAS]; GO:0016829 - lyase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016849 - phosphorus-oxygen lyase activity [Evidence IEA] GO_process : GO:0007190 - adenylate cyclase activation [Evidence TAS]; GO:0006171 - cAMP biosynthesis [Evidence TAS]; GO:0009190 - cyclic nucleotide biosynthesis [Evidence IEA]; GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 note : adenylyl cyclase type VII product : adenylate cyclase 7 protein_id : NP_001032813.1

name	Adcy7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680646 CCDS:CCDS22509.1 GeneID:11513 MGI:102891
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence TAS] GO_function : GO:0004016 - adenylate cyclase activity [Evidence TAS]; GO:0016829 - lyase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016849 - phosphorus-oxygen lyase activity [Evidence IEA] GO_process : GO:0007190 - adenylate cyclase activation [Evidence TAS]; GO:0006171 - cAMP biosynthesis [Evidence TAS]; GO:0009190 - cyclic nucleotide biosynthesis [Evidence IEA]; GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 exception : mismatches in translation function : synthesizes cyclic AMP note : adenylyl cyclase type VII product : adenylate cyclase 7 protein_id : NP_031432.1

name	Brd7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755234 CCDS:CCDS22510.1 GeneID:26992 MGI:1349766
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IPI] GO_function : GO:0042393 - histone binding [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI]; GO:0008134 - transcription factor binding [Evidence ISS] GO_process : GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence ISS]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 note : bromodomain-containing protein; protein tyrosine phosphatase, non-receptor type 13 interacting protein; bromodomain protein 75 kDa; bromodomain-containing 7 product : bromodomain containing 7 protein_id : NP_036177.1

name	LOC100040369 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258976 GeneID:100040369
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474609.1

name	Nkd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980622 CCDS:CCDS22511.1 GeneID:93960 MGI:2135954
definition	codon_start : 1 exception : mismatches in translation product : naked cuticle 1 homolog protein_id : NP_081556.2

name	9130017C17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313650 CCDS:CCDS22512.1 GeneID:71607 MGI:1918857
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0035091 - phosphoinositide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : selectin ligand interactor cytoplasmic-1 protein_id : NP_082116.1

name	Nod2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83977454 GeneID:257632 MGI:2429397
definition	GO_component : GO:0005737 - cytoplasm [Evidence TAS]; GO:0005829 - cytosol [Evidence ISS]; GO:0005622 - intracellular [Evidence IEA]; GO:0005886 - plasma membrane [Evidence ISS]; GO:0031982 - vesicle [Evidence ISS] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0050700 - CARD domain binding [Evidence ISS]; GO:0019899 - enzyme binding [Evidence ISS]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0042834 - peptidoglycan binding [Evidence ISS] [Evidence TAS]; GO:0005515 - protein binding [Evidence IEA]; GO:0019901 - protein kinase binding [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0051092 - activation of NF-kappaB transcription factor [Evidence ISS] [Evidence IDA]; GO:0001816 - cytokine production [Evidence IMP]; GO:0042742 - defense response to bacterium [Evidence ISS]; GO:0016045 - detection of bacterium [Evidence ISS]; GO:0006954 - inflammatory response [Evidence TAS]; GO:0043123 - positive regulation of I-kappaB kinase/NF-kappaB cascade [Evidence ISS]; GO:0051259 - protein oligomerization [Evidence TAS]; GO:0042981 - regulation of apoptosis [Evidence IEA]; GO:0007165 - signal transduction [Evidence TAS]; GO:0008063 - Toll signaling pathway [Evidence IMP] codon_start : 1 product : caspase recruitment domain family, member 15 protein_id : NP_665856.2

name	Cyld (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27734060 CCDS:CCDS22513.1 GeneID:74256 MGI:1921506
definition	GO_function : GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]; GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004221 - ubiquitin thiolesterase activity [Evidence IEA] GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA]; GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IEA] codon_start : 1 product : ubiquitin carboxyl-terminal hydrolase CYLD protein_id : NP_775545.1

name	LOC675985 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258986 GeneID:675985
definition	codon_start : 1 product : similar to ribosomal protein S6 protein_id : XP_001476627.1

name	Sall1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11496251 GeneID:58198 MGI:1889585
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0031129 - inductive cell-cell signaling [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0001657 - ureteric bud development [Evidence IMP] codon_start : 1 exception : unclassified translation discrepancy function : zinc finger transcription factor product : sal-like 1 protein_id : NP_067365.1

name	LOC100041089 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258990 GeneID:100041089
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476696.1

clone name	MSMg01-067A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-107H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-055B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-330D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-170P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-193I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414G05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-108J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271C23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-098B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-209K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125H07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-538G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178F03
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-216E12.b	B6Ng01-216E12.g
ACC	GA033013	GA033014
length	1,034	161
definition	B6Ng01-216E12.b	B6Ng01-216E12.g
singlet/doublet	singlet	singlet
BLAST hit	unique	unique
Map location.	(90,568,170 - 90,569,197)	(27,702,990 - 27,703,457)
sequence	gaattccacagataactttggtcctgatgtggctactaggatgcaaataa cactttatgcctccttttgcagttccgttgaagacagtgctacccaagtg agcattccaaatcatgtttaaagagaggtaagagatgtgctgcagagtcc aaagaacaagatagctgtggctcagatggctttacatctttcaagaacca agacccctgtctgctacagctctgctgtgcaagccctgagcacaactgca gctttctctgacacaccatcccacagggactttctcacctatacagtgtt ctcatgtcaaataagatcattgtacaaggtctttgttacattgaatcctg aatttattcagttatgttaagtgcaataaaatacctgggttttgtacttg ccttcatgttaagactttatttggtgtaattttagatatacgggacattt gcaaagatggtcaaaggggtttcttcatgttgcttcctcagtagttagtg tcccacataacagagtgccatcatatgctgtagtagcattaagcatgcaa caggctttatttgagtttcatgttggttagttttctcacagatctcattc ttctgttccagagccctagtctggtgaccacaatacatccatgtactttt tcactttaatatgtccgtttcttttactgggaatcatttttagtataagt acatttgcataagaagtattgtaaggactggagagatggcccattcgttg aaaagcacttgttgctctttcagaggacttgggtttggtttccagaactc acatggtggctccagattcaggagatctgacacccttctgatcttctgtg gtgcatcaggcatgcacgtggtgcacatacatatattaaagctatacact aatacacaaaaataaatctacatttgttttgttaaagaagttagggtttt tcttgctgtgaagagacaattgacttacagcaacttcttataaaggaaaa catttaattttgcctgtcttacaagttcagagtt	atctgggcgcggtggtgcacacctttaatcccagcactcaggaggctgga gcaggttatgagtccgaggccaggctggtctacagagctagttctaggac agccagggctgtatggagggatcttgtcttgaaaaaccaaaaggaaaaaa aaaggaaagaa
quality values	Open. Hide. 58 29 33 22 58 58 32 21 47 26 58 42 42 58 62 62 62 62 62 62 47 62 62 62 54 62 47 47 54 54 62 32 26 24 22 32 30 29 19 27 15 14 43 44 43 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 50 59 59 54 38 32 62 62 59 59 56 62 62 59 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 56 62 56 62 56 62 62 62 62 62 62 62 62 62 62 56 56 56 46 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 52 49 62 62 62 52 62 62 62 62 62 54 58 58 54 58 58 58 45 54 58 58 58 58 52 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 54 58 54 58 58 58 54 54 58 54 58 58 54 54 58 58 52 48 58 58 54 47 58 58 58 58 42 52 40 58 58 58 58 50 58 58 58 48 49 58 58 54 58 58 45 38 42 58 53 47 58 58 46 58 58 54 52 53 53 53 52 58 49 58 53 40 49 58 50 54 46 47 54 58 33 54 42 52 51 40 58 24 43 49 51 53 53 53 51 54 38 58 58 31 50 37 30 53 40 53 33 37 50 58 53 52 52 41 51 50 51 58 46 40 38 58 58 58 58 58 39 34 39 50 58 39 42 58 40 23 22 15 9 12 19 49 50 58 49 40 32 58 58 50 29 42 38 58 49 32 38 44 37 52 41 33 58 58 58 41 50 32 32 34 35 16 58 52 39 32 49 26 32 54 47 45 31 39 53 26 54 19 54 38 25 40 39 33 39 52 26 35 38 42 47 37 35 35 51 38 51 31 31 16 47 28 41 39 33 54 32 30 33 39 37 26 28 38 37 53 54 54 51 33 38 42 32 54 40 44 28 10 16 32 52 39 54 54 21 31 18 16 54 31 24 41 16 53 37 42 54 14 6 51 44 31 41 32 53 35 40 41 31 27 53 40 29 32 32 28 32 30 31 32 53 31 46 10 12 32 29 51 23 29 33 18 14 21 24 26 31 45 15 31 21 31 42 30 27 20 26 31 51 30 18 51 27 14 22 36 18 8 6 13 14 28 30 13 14 6 9 14 13 26 35 24 30 27 23 19 23 33 35 24 31 45 30 17 18 21 9 22 13 25 29 26 32 23 31 23 25 32 34 25 31 31 31 46 30 16 13 31 18 31 20 31 22 28 30 35 28 28 32 18 12 10 7 37 39 31 32 31 29 46 31 43 36 31 32 14 6 4 15 7 27 31 46 46 6 29 7 7 44 43 34 6 29 25 21 14 26 22 24 31 33 25 48 48 46 11 24 9 24 12 13 26 11 11 16 38 11 6 28 11 29 29 21 17 10 8 10 25 16 12 17 11 27 9 11 26 18 19 10 8 32 33 42 25 21 14 20 41 14 25 15 37 44 38 31 14 24 19 39 19 17 19 25 48 48 32 31 22 22 19 27 9 20 29 8 4 6 7 21 4 6 6 8 13 17 25 9 4 4	Open. Hide. 34 49 59 59 49 34 23 36 25 36 23 17 27 46 28 20 29 34 41 51 51 51 59 59 62 62 49 56 49 56 56 49 49 49 59 59 59 62 59 59 59 62 62 59 59 34 59 62 62 62 41 41 41 24 46 38 49 49 49 49 59 39 43 49 51 43 62 43 59 43 49 49 59 56 56 56 62 62 59 62 62 62 62 59 51 62 59 62 62 62 62 62 62 62 62 62 62 62 62 51 59 59 59 59 59 59 59 62 59 62 59 56 56 59 62 62 62 59 62 62 59 59 62 62 62 54 54 62 62 62 59 62 62 59 62 62 59 59 49 51 56 59 51 62 62 59 59 59 56 59 59 56 51 45 59 59 56 56 45 59 46

Alignment Information

BAC End 1

BAC End 2

seq1: chr8_90568170_90569197
seq2: B6Ng01-216E12.b_44_1077 (reverse)

seq1  ACCTCTGAAACTGTAAGACAGGCAAAATTAAATGTTTTCCTTTATAAG-A  49
      | |||||||  ||||||||||||||||||||||||||||||||||||| |
seq2  AACTCTGAACTTGTAAGACAGGCAAAATTAAATGTTTTCCTTTATAAGAA  50

seq1  GTTGCTGT-AGTC-ATTGTCTCTTCACAGCAAG-AAAACCCTAACCTTCT  96
      |||||||| |||| ||||||||||||||||||| |||||||||| |||||
seq2  GTTGCTGTAAGTCAATTGTCTCTTCACAGCAAGAAAAACCCTAA-CTTCT  99

seq1  TTTACAAAACAATTGTAGATTTA-TTTTGTGTATTAGTGTATAGCTTTAA  145
      || ||||||||| |||||||||| ||||||||||||||||||||||||||
seq2  TTAACAAAACAAATGTAGATTTATTTTTGTGTATTAGTGTATAGCTTTAA  149

seq1  TATATGTATGTGCACCACGTGCATGCCTGATGCA-CACAG-AGATCAGAA  193
      |||||||||||||||||||||||||||||||||| ||||| |||||||||
seq2  TATATGTATGTGCACCACGTGCATGCCTGATGCACCACAGAAGATCAGAA  199

seq1  GGGTGTCAGATCTCCTGAATCTGGAGCCACCATGTGAGTTCTGGAAACCA  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTCAGATCTCCTGAATCTGGAGCCACCATGTGAGTTCTGGAAACCA  249

seq1  AACCCAAGTCCTCTGAAAGAGCAACAAGTGCTTTTCAACGAATGGGCCAT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAAGTCCTCTGAAAGAGCAACAAGTGCTTTTCAACGAATGGGCCAT  299

seq1  CTCTCCAGTCCTTACAATACTTCTTATGCAAATGTACTTATACTAAAAAT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCAGTCCTTACAATACTTCTTATGCAAATGTACTTATACTAAAAAT  349

seq1  GATTCCCAGTAAAAGAAACGGACATATTAAAGTGAAAAAGTACATGGATG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCCAGTAAAAGAAACGGACATATTAAAGTGAAAAAGTACATGGATG  399

seq1  TATTGTGGTCACCAGACTAGGGCTCTGGAACAGAAGAATGAGATCTGTGA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTGGTCACCAGACTAGGGCTCTGGAACAGAAGAATGAGATCTGTGA  449

seq1  GAAAACTAACCAACATGAAACTCAAATAAAGCCTGTTGCATGCTTAATGC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTAACCAACATGAAACTCAAATAAAGCCTGTTGCATGCTTAATGC  499

seq1  TACTACAGCATATGATGGCACTCTGTTATGTGGGACACTAACTACTGAGG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACAGCATATGATGGCACTCTGTTATGTGGGACACTAACTACTGAGG  549

seq1  AAGCAACATGAAGAAACCCCTTTGACCATCTTTGCAAATGTCCCGTATAT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAACATGAAGAAACCCCTTTGACCATCTTTGCAAATGTCCCGTATAT  599

seq1  CTAAAATTACACCAAATAAAGTCTTAACATGAAGGCAAGTACAAAACCCA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAATTACACCAAATAAAGTCTTAACATGAAGGCAAGTACAAAACCCA  649

seq1  GGTATTTTATTGCACTTAACATAACTGAATAAATTCAGGATTCAATGTAA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTTTATTGCACTTAACATAACTGAATAAATTCAGGATTCAATGTAA  699

seq1  CAAAGACCTTGTACAATGATCTTATTTGACATGAGAACACTGTATAGGTG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGACCTTGTACAATGATCTTATTTGACATGAGAACACTGTATAGGTG  749

seq1  AGAAAGTCCCTGTGGGATGGTGTGTCAGAGAAAGCTGCAGTTGTGCTCAG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTCCCTGTGGGATGGTGTGTCAGAGAAAGCTGCAGTTGTGCTCAG  799

seq1  GGCTTGCACAGCAGAGCTGTAGCAGACAGGGGTCTTGGTTCTTGAAAGAT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGCACAGCAGAGCTGTAGCAGACAGGGGTCTTGGTTCTTGAAAGAT  849

seq1  GTAAAGCCATCTGAGCCACAGCTATCTTGTTCTTTGGACTCTGCAGCACA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAGCCATCTGAGCCACAGCTATCTTGTTCTTTGGACTCTGCAGCACA  899

seq1  TCTCTTACCTCTCTTTAAACATGATTTGGAATGCTCACTTGGGTAGCACT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTACCTCTCTTTAAACATGATTTGGAATGCTCACTTGGGTAGCACT  949

seq1  GTCTTCAACGGAACTGCAAAAGGAGGCATAAAGTGTTATTTGCATCCTAG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCAACGGAACTGCAAAAGGAGGCATAAAGTGTTATTTGCATCCTAG  999

seq1  TAGCCACATCAGGACCAAAGTTATCTGTGGAATTC  1028
      |||||||||||||||||||||||||||||||||||
seq2  TAGCCACATCAGGACCAAAGTTATCTGTGGAATTC  1034

seq1: chr14_27702990_27703457
seq2: B6Ng01-216E12.g_91_230 (reverse)

seq1  TTCTTTCCTTTTTTTTTTTTTTTATTTTTTTTTTAATTTAAATTTGTCTG  50
                                                        
seq2  --------------------------------------------------  0

seq1  TTTTGTTGGTTTGGTTTGGATTGGATTTTGCTCTGTAGACCAGGCTGGCC  100
                                                        
seq2  --------------------------------------------------  0

seq1  TCGAACTCAGAGATCTGCCTGACTCTGCCTCCCAAGTGCTGAGATTAAAG  150
                                                        
seq2  --------------------------------------------------  0

seq1  GCCTGTCACTGTTTTAGTAAAAGTGAATTAATAACAATAATAATGAGGAG  200
                                                        
seq2  --------------------------------------------------  0

seq1  CATTCATTTTTCTAACTTTTAAAAGTTATTTTTAGTGTTCCCCTTTTGAA  250
                                                        
seq2  --------------------------------------------------  0

seq1  ATGCTATGGTCAGACCTAGTGCCTCGCACATAAGAGGCAAGAGCTCTACC  300
                                                        
seq2  --------------------------------------------------  0

seq1  ACTACTCAGTTACACTCAACTTTCTTTTTTTTTTTTTTTTTTTTTTGGTT  350
                           |||  |||  |||||||||  ||||||||
seq2  ---------------------TTC--TTTCCTTTTTTTTTCCTTTTGGTT  27

seq1  TTTTGAGACGGGGTGTCTCTGTATAGCCCTGGCTGTCCTGGAACTCACTC  400
      |||  ||||  | |  |||  || ||||||||||||||| |||||  |||
seq2  TTTCAAGACAAGATCCCTCCATACAGCCCTGGCTGTCCTAGAACTAGCTC  77

seq1  TGTAGACCAGGCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTCCT  450
      |||||||||| ||||||||| ||||| ||     |||||  | |||||||
seq2  TGTAGACCAGCCTGGCCTCGGACTCATAA-----CCTGCTCCAGCCTCCT  122

seq1  GAGTGCTGGGATTAAAGG  468
      ||||||||||||||||||
seq2  GAGTGCTGGGATTAAAGG  140

BAC Information

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BAC

BAC End Information

Alignment Information