BAC Information

Click to search

BAC

Clone NameB6Ng01-217H14
Chromosome8 (Build37)
Map Location 14,097,323 - 14,098,239
singlet/doubletsinglet
Overlap geneDlgap2
Upstream genePcid2, Cul4a, Lamp1, Grtp1, Adprhl1, Dcun1d2, Tmco3, Tfdp1, Atp4b, Grk1, Gm687, Gas6, LOC434282, 1700029H14Rik, Rasa3, 4932443I19Rik, LOC665516, Cdc16, Upf3a, AF366264, D8Ertd457e, 2410022L05Rik, EG665536, Fbxo25, LOC100041103, 2610019F03Rik, EG546036, Erich1
Downstream geneLOC100041140, C030037F17Rik, Cln8, Arhgef10, 2900016B01Rik, 5830468F06Rik, Kbtbd11, BB014433, Myom2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-217H14.bB6Ng01-217H14.g
ACCGA033873GA033874
length1,230914
definitionB6Ng01-217H14.b B6Ng01-217H14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttgcagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagacattttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcggtgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttccttaattctttcttcagagatttgaagtttttatcatac
agatctttcacttccttagttagagtcacgccaagatattttattattat
ttgtgactattgaagaaaggtggtgtttccctaatttcttttctcagcct
gtttaattctttggtatagagaaaggccattgacttgttttgagttaatt
ttaatattcaagctacttcaccggaagcggttttatcaggtttagggagt
tctctgggtaagaacttttaggccaccttatattatactatcatatccat
ctggcaaaagttgattatggacttctccgttccatgtttccccatggatc
tcctcgtctggtgtggtacagaagagtgct
ccctcgctcttgatgaactctgccagtccgagctgtgggcgtttcagggc
tggagattaaagcgtaccagtttttcctggcgtctaatacttggaggcgg
gagggagctgtctggactcggagccttgggattgctgttagtggccaggt
gggtacatcagcctacaaccttgagatctgaccgttaccttggatcccag
tcacctgtgttttgcagaaggcttttattgtacagtccacaaactaattg
catttgtattgagaaaacaacccggagtcacagaatagcccaaagtaacc
caggaccgcttcagagttgtgtacaaatctgaagctgacttacttaatcc
aacctccccaatagtatatagactttaagtgcactatagcgtgattttca
tcttcatattccctgtggaaggtgctacatagccaaggccaagaaaaatt
tggtgatatgatgaaaaataataaaatttggcaggtcaggttgttactct
ggtgttttaaaaatgccgtttaatgccattaatcaggattctccagtagc
caaattgtcttgtgcaggcagtagggtgactcacacagatttggcttcca
tggtaattgtagattgtgcatacgacttccttttagatggtgtgactttt
ttcattacttagaagggaacaaattagaatattttccgccccacatctgg
ctgcctggctggcaggcctcagggagcccgctgctcgagcacatctggat
tgggagaaacataatccaatggaagatgggcagtattccgcagcgacacc
acttctccattccatggggctgatgtagtgaatatgggttttgttctctg
agatggtctgtatgagctgttatgtcccacaatcccctctgaaatcaatc
tccactgttaagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_14097323_14098239
seq2: B6Ng01-217H14.g_73_986

seq1  CCCTCGCTCTTGATGAACTCTGCCAGTCCGAGCTGTGGGCGTTTCAGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCGCTCTTGATGAACTCTGCCAGTCCGAGCTGTGGGCGTTTCAGGGC  50

seq1  TGGAGATTAAAGCGTACCAGTTTTTCCTGGCGTCTAATACTTGGAGGCGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGATTAAAGCGTACCAGTTTTTCCTGGCGTCTAATACTTGGAGGCGG  100

seq1  GAGGGAGCTGTCTGGACTCGGAGCCTTGGGATTGCTGTTAGTGGCCAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAGCTGTCTGGACTCGGAGCCTTGGGATTGCTGTTAGTGGCCAGGT  150

seq1  GGGTACATCAGCCTACAACCTTGAGATCTGACCGTTACCTTGGATCCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTACATCAGCCTACAACCTTGAGATCTGACCGTTACCTTGGATCCCAG  200

seq1  TCACCTGTGTTTTGCAGAAGGCTTTTATTGTACAGTCCACAAACTAATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTGTGTTTTGCAGAAGGCTTTTATTGTACAGTCCACAAACTAATTG  250

seq1  CATTTGTATTGAGAAAACAACCCGGAGTCACAGAATAGCCCAAAGTAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTATTGAGAAAACAACCCGGAGTCACAGAATAGCCCAAAGTAACC  300

seq1  CAGGACCGCTTCAGAGTTGTGTACAAATCTGAAGCTGACTTACTTAATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACCGCTTCAGAGTTGTGTACAAATCTGAAGCTGACTTACTTAATCC  350

seq1  AACCTCCCCAATAGTATATAGACTTTAAGTGCACTATAGCGTGATTTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTCCCCAATAGTATATAGACTTTAAGTGCACTATAGCGTGATTTTCA  400

seq1  TCTTCATATTCCCTGTGGAAGGTGCTACATAGCCAAGGCCAAGAAAAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATATTCCCTGTGGAAGGTGCTACATAGCCAAGGCCAAGAAAAATT  450

seq1  TGGTGATATGATGAAAAATAATAAAATTTGGCAGGTCAGGTTGTTACTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGATATGATGAAAAATAATAAAATTTGGCAGGTCAGGTTGTTACTCT  500

seq1  GGTGTTTTAAAAATGCCGTTTAATGCCATTAATCAGGATTCTCCAGTAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTTTAAAAATGCCGTTTAATGCCATTAATCAGGATTCTCCAGTAGC  550

seq1  CAAATTGTCTTGTGCAGGCAGTAGGGTGACTCACACAGATTTGGCTTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTGTCTTGTGCAGGCAGTAGGGTGACTCACACAGATTTGGCTTCCA  600

seq1  TGGTAATTGTAGATTGTGCATACGACTTCCTTTTAGATGGTGTGACTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAATTGTAGATTGTGCATACGACTTCCTTTTAGATGGTGTGACTTTT  650

seq1  TTCATTACTTAGAAGGGAACAAATTAGAATATTTTCCGCCCCACATCTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTACTTAGAAGGGAACAAATTAGAATATTTTCCGCCCCACATCTGG  700

seq1  CTGCCTGGCTGGCAGGCCTCAGGGAGCCCGCTGCTCGAGCACATCTGGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGGCTGGCAGGCCTCAGGGAGCCCGCTGCTCGAGCACATCTGGAT  750

seq1  TGGGAGAAACATAAATCCAATGGAAGATGGGCAGTAATCCGCAGCGACAC  800
      |||||||||||| ||||||||||||||||||||||| |||||||||||||
seq2  TGGGAGAAACAT-AATCCAATGGAAGATGGGCAGTATTCCGCAGCGACAC  799

seq1  CACTTCTCCATTCCATGGGGCTGATGTAGTGAATATGGGTTTTGTTCTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTCCATTCCATGGGGCTGATGTAGTGAATATGGGTTTTGTTCTCT  849

seq1  GAGATGGTCTGTTATGAGCTGTTTATGTCCCACTATTCCCTTCTGAAATC  900
      ||||||||||| ||||||||| ||||||||||| | |||| |||||||||
seq2  GAGATGGTCTG-TATGAGCTG-TTATGTCCCAC-AATCCCCTCTGAAATC  896

seq1  -ATCTCCACTGTTAAGTC  917
       |||||||||||||||||
seq2  AATCTCCACTGTTAAGTC  914