BAC Information

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BAC

Clone NameB6Ng01-217L13
Chromosome8 (Build37)
Map Location 40,681,687 - 40,798,266
singlet/doubletdoublet
Overlap geneMsr1
Upstream geneTusc3, LOC100038974, LOC632066, EG621335, LOC434304
Downstream geneEG621431, LOC100039072, LOC666959, EG632166, Fgf20, 2900075B16Rik, Zdhhc2, Cnot7, Vps37a, Mtmr7, LOC100039179, Adam24, LOC667019
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-217L13.bB6Ng01-217L13.g
ACCGA034046GA034047
length967597
definitionB6Ng01-217L13.b B6Ng01-217L13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(40,797,676 - 40,798,266)(40,681,687 - 40,682,283)
sequence
gaattctgtttctcagagaggaaaacattatccagtataaaagtttgcat
tatcaaagcttacttctaccttgtagaatacaacattttgaaaacattgc
atctgatatggtttaatttaaggttggtaacgattttctaggcaaaaagt
gagtccctgtacagtaataagatttgaaataattatgtggacatctttaa
tttataattagaaatgcaattatcatagagatggaaaagaccaagctatc
acaagcagtatatttttttgtgtttcagtaagtcgaattcattagtgagt
gtctatttacatcaggcagtttaggtacagctggtaaaacaaaatttaat
aacgttttctagcccatgctttcttaaattttttcgctcaatcacttctt
ttgaggaaatgtatacaatttttgtatattgttatataaaataggtatac
caataaaatatttactggtaacaaattataagaaaaattattttcaacaa
gtctttggaacttgtgcaattttaccattcattccatatacaaccaccaa
acccagacactattgtgtatgccacaaagattttgctgacaggaccctga
catagctctctcttgtgaggctatgccaatgcctggcaaatacagaagtg
gatgctcacagtcatctattggatggaacacagggtccttaatgaaggag
ctagaaaaattacccaaggagctaaaggtgtctgcaaccctataggagga
acaacaatattaactaaccaataaccccccccccccagagctgtgtctct
agtttcatatgtagcagaagatggcttaatcaaccatcaatgggaggaga
ggcccttggtcttgcaaattcatatgccccagtagaggggaatgccagcg
ccaggaagcagagtgggtgggttggggagcaggtggcagaaggaatagga
gctttgggatagcattt
gaattctaagtttgtacatttcagactgactttgagaaaatttgcatgtc
cttctttgtaagccattgaggcactgatgaatgaatgaacctctgcaaac
cctcatctgatcacttacagaataaatacatacggtaagacatgtatctt
ggggttaggatggaaaattgtacagtatgtaaaacgatgtatcctaatgt
atgaagtaatatagatgaatagtatgaaagtaaaatcgaatgaaattagt
cattatttattttgaaaattatcctgcagagtcatggattgtaaggggac
ttaaaaggtgaggtttagggagaaaacatgttcgaaatttggcccgctag
agtttagtctgcttagttactgtcagctctgacaagttagtagagttttc
tgacttatatgaaaataaaattctcacaatttactgagtgtttatacctt
gagttagatttggaggcaactgagagacaccatacagtcctggtggcata
tgtttatgtttacaaatgtttttgtctatgcaaaagctataaacagactg
acttaatggaacaggtaaaagacgtgtgtgtgtgtgtgtgtggagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_40797676_40798266
seq2: B6Ng01-217L13.b_54_644 (reverse)

seq1  TGTCAGCAAAATCTTTGTGGCATACACAATAGTGTCTGGGTTTGGTGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGCAAAATCTTTGTGGCATACACAATAGTGTCTGGGTTTGGTGGTT  50

seq1  GTATATGGAATGAATGGTAAAATTGCACAAGTTCCAAAGACTTGTTGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATGGAATGAATGGTAAAATTGCACAAGTTCCAAAGACTTGTTGAAA  100

seq1  ATAATTTTTCTTATAATTTGTTACCAGTAAATATTTTATTGGTATACCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTTTCTTATAATTTGTTACCAGTAAATATTTTATTGGTATACCTA  150

seq1  TTTTATATAACAATATACAAAAATTGTATACATTTCCTCAAAAGAAGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATATAACAATATACAAAAATTGTATACATTTCCTCAAAAGAAGTGA  200

seq1  TTGAGCGAAAAAATTTAAGAAAGCATGGGCTAGAAAACGTTATTAAATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCGAAAAAATTTAAGAAAGCATGGGCTAGAAAACGTTATTAAATTT  250

seq1  TGTTTTACCAGCTGTACCTAAACTGCCTGATGTAAATAGACACTCACTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTACCAGCTGTACCTAAACTGCCTGATGTAAATAGACACTCACTAA  300

seq1  TGAATTCGACTTACTGAAACACAAAAAAATATACTGCTTGTGATAGCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTCGACTTACTGAAACACAAAAAAATATACTGCTTGTGATAGCTTG  350

seq1  GTCTTTTCCATCTCTATGATAATTGCATTTCTAATTATAAATTAAAGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTTCCATCTCTATGATAATTGCATTTCTAATTATAAATTAAAGATG  400

seq1  TCCACATAATTATTTCAAATCTTATTACTGTACAGGGACTCACTTTTTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATAATTATTTCAAATCTTATTACTGTACAGGGACTCACTTTTTGC  450

seq1  CTAGAAAATCGTTACCAACCTTAAATTAAACCATATCAGATGCAATGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAAATCGTTACCAACCTTAAATTAAACCATATCAGATGCAATGTTT  500

seq1  TCAAAATGTTGTATTCTACAAGGTAGAAGTAAGCTTTGATAATGCAAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATGTTGTATTCTACAAGGTAGAAGTAAGCTTTGATAATGCAAACT  550

seq1  TTTATACTGGATAATGTTTTCCTCTCTGAGAAACAGAATTC  591
      |||||||||||||||||||||||||||||||||||||||||
seq2  TTTATACTGGATAATGTTTTCCTCTCTGAGAAACAGAATTC  591

seq1: chr8_40681687_40682283
seq2: B6Ng01-217L13.g_68_664

seq1  GAATTCTAAGTTTGTACATTTCAGACTGACTTTGAGAAAATTTGCATGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGTTTGTACATTTCAGACTGACTTTGAGAAAATTTGCATGTC  50

seq1  CTTCTTTGTAAGCCATTGAGGCACTGATGAATGAATGAACCTCTGCAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTGTAAGCCATTGAGGCACTGATGAATGAATGAACCTCTGCAAAC  100

seq1  CCTCATCTGATCACTTACAGAATAAATACATACGGTAAGACATGTATCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATCTGATCACTTACAGAATAAATACATACGGTAAGACATGTATCTT  150

seq1  GGGGTTAGGATGGAAAATTGTACAGTATGTAAAACGATGTATCCTAATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTTAGGATGGAAAATTGTACAGTATGTAAAACGATGTATCCTAATGT  200

seq1  ATGAAGTAATATAGATGAATAGTATGAAAGTAAAATCGAATGAAATTAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGTAATATAGATGAATAGTATGAAAGTAAAATCGAATGAAATTAGT  250

seq1  CATTATTTATTTTGAAAATTATCCTGCAGAGTCATGGATTGTAAGGGGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTTATTTTGAAAATTATCCTGCAGAGTCATGGATTGTAAGGGGAC  300

seq1  TTAAAAGGTGAGGTTTAGGGAGAAAACATGTTCGAAATTTGGCCCGCTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGGTGAGGTTTAGGGAGAAAACATGTTCGAAATTTGGCCCGCTAG  350

seq1  AGTTTAGTCTGCTTAGTTACTGTCAGCTCTGACAAGTTAGTAGAGTTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAGTCTGCTTAGTTACTGTCAGCTCTGACAAGTTAGTAGAGTTTTC  400

seq1  TGACTTATATGAAAATAAAATTCTCACAATTTACTGAGTGTTTATACCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTATATGAAAATAAAATTCTCACAATTTACTGAGTGTTTATACCTT  450

seq1  GAGTTAGATTTGGAGGCAACTGAGAGACACCATACAGTCCTGGTGGCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTAGATTTGGAGGCAACTGAGAGACACCATACAGTCCTGGTGGCATA  500

seq1  TGTTTATGTTTACAAATGTTTTTGTCTATGCAAAAGCTATAAACAGACTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATGTTTACAAATGTTTTTGTCTATGCAAAAGCTATAAACAGACTG  550

seq1  ACTTAATGGAACAGGTAAAAGACGTGTGTGTGTGTGTGTGTGGAGTG  597
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAATGGAACAGGTAAAAGACGTGTGTGTGTGTGTGTGTGGAGTG  597