BAC Information

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BAC

Clone NameB6Ng01-217L21
Chromosome8 (Build37)
Map Location 32,519,463 - 32,627,654
singlet/doubletdoublet
Overlap geneLOC100041329
Upstream geneLOC547008, Dusp26, Rnf122, BC019943, Rbm13, Fut10, LOC666330, LOC666568, 7420700N18Rik
Downstream geneEG330731, LOC100041340, Nrg1, 2010007E15Rik, EG666589, EG546052
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-217L21.bB6Ng01-217L21.g
ACCGA034060GA034061
length2741,070
definitionB6Ng01-217L21.b B6Ng01-217L21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,519,463 - 32,519,736)(32,626,596 - 32,627,654)
sequence
ttcagcaatgttatctggaaacagaacaccatttcttcgaatgttttgga
atctagactggcctcaaaaatcatgatcttcctacttcaggcttcttact
gcaattaccggcctgagtcactgagtgtgtgtgagtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtaaagactcatgtgtatgttttaactaattttagaat
tgcttgaaaacatacaggaaagttgtatatatgatatgataagaaaaaat
ttttcttctaattaggttgagtat
gaattccaggatctggcctgctacagtgagtgccaagcagagacccatgt
cccctgcctcttgtacagtgactatggacaacgtctctggaacctgatta
ggcagatatcctggggactgcttccgggaccctttctctcaggcagcaga
ggaagcaaaattccttctactggggaacagaggaggataactgacacatg
ggctttgccttgaaggtcagagccaaccctgatgacttgtgatctggtac
tagctatgaactagaggcctgacagacaaaacttccagatctttccaata
ttatatataaagacttacggtatcagtggagttaactcatggcctatatc
actgtcaatattagagttggctggagggatcagtggattgcatagatcct
tcatctgtaagagtcaggtgaaacccagaataaccaaggaagtgtctcta
taccccgcgtcaggaaatataaccattcatcctcaagctgaccctcacat
atggagactctggctctgagcaggcagcagtattctaggaggagagaccc
aggctttgaatcacatcactgccaactgaaactgaagtgccagtctcagg
acttaatacaccatctgtagtactgaagtggcaaaagtgacttgttcata
acttctggaactcaagcaaaaaacaatgaagctagatgatgcatagtaca
atatgtaatcctggaatgttcagatggcatcatgaaataggcatcaagag
ctttcatataatgtaataatcaaaataaggtaatactagaagttgatcat
atagcaatgagcatgggtgagttttcagtgatgtgttgggtttaagctct
ttacaagaacactcagttcttctttgactttcatgttgtttcacaatttg
catcttatatcttgagttattctaagtttctgggctaatatccactttat
tcagtgaatacatattcatgtgagttccttttgtgaatggggtttaccct
cactcagattgatgccttcaaggtcaatccatttgcctaagaatttcata
taaatccatctttttatagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_32519463_32519736
seq2: B6Ng01-217L21.b_50_323

seq1  TTCAGCAATGTTATCTGGAAACAGAACACCATTTCTTCGAATGTTTTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCAATGTTATCTGGAAACAGAACACCATTTCTTCGAATGTTTTGGA  50

seq1  ATCTAGACTGGCCTCAAAAATCATGATCTTCCTACTTCAGGCTTCTTACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGACTGGCCTCAAAAATCATGATCTTCCTACTTCAGGCTTCTTACT  100

seq1  GCAATTACCGGCCTGAGTCACTGAGTGTGTGTGAGTGTGTGTGTGTGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTACCGGCCTGAGTCACTGAGTGTGTGTGAGTGTGTGTGTGTGTGT  150

seq1  GTGTGTGTGTGTGTAAAGACTCATGTGTATGTTTTAACTAAATTTAGAAT  200
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GTGTGTGTGTGTGTAAAGACTCATGTGTATGTTTTAACTAATTTTAGAAT  200

seq1  TGCTTGAAAACATACAGGAAAGTTGTATATATGATATGATAAGAAAGAAT  250
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TGCTTGAAAACATACAGGAAAGTTGTATATATGATATGATAAGAAAAAAT  250

seq1  TTTTCTCCTAAATAGGTTGAGAAT  274
      |||||| |||| ||||||||| ||
seq2  TTTTCTTCTAATTAGGTTGAGTAT  274

seq1: chr8_32626596_32627654
seq2: B6Ng01-217L21.g_68_1137 (reverse)

seq1  GCTATTAAAAAGAATGAATT-TATGAAATTCCTAGCCAAATGGATGGACC  49
      |||| ||||||||  || || |||||||||| ||| ||||||||| ||||
seq2  GCTA-TAAAAAGATGGATTTATATGAAATTCTTAGGCAAATGGATTGACC  49

seq1  TGGAGGGCATCATCCTGAGTGA-GGTAA--CCCAATCACAAAA-GAACTC  95
      | || |||||||  |||||||| |||||  |||| |||||||| ||||||
seq2  TTGAAGGCATCAATCTGAGTGAGGGTAAACCCCATTCACAAAAGGAACTC  99

seq1  ACATG-ATATGTATTCACTGA--TAAGTGGATATTAGCCCAGAAACTTAG  142
      ||||| |||||||||||||||   ||||||||||||||||||||||||||
seq2  ACATGAATATGTATTCACTGAATAAAGTGGATATTAGCCCAGAAACTTAG  149

seq1  AAT-ACTCAAGATATAAGATGCAATTTGTGAAAC-ACATGAAAGTC-AAG  189
      ||| |||||||||||||||||||| ||||||||| ||||||||||| |||
seq2  AATAACTCAAGATATAAGATGCAAATTGTGAAACAACATGAAAGTCAAAG  199

seq1  AAGAACTGAGTGTTCTTGTAAAGAGCTT-AACCCAACACATCACTGAAAA  238
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AAGAACTGAGTGTTCTTGTAAAGAGCTTAAACCCAACACATCACTGAAAA  249

seq1  CTCACCCATGCTCATTGCTATATGATCAACTTCTAGTATTACCTTATTTT  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCCATGCTCATTGCTATATGATCAACTTCTAGTATTACCTTATTTT  299

seq1  GATTATTACATTATATGAAAGCTCTTGATGCCTATTTCATGATGCCATCT  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATTACATTATATGAAAGCTCTTGATGCCTATTTCATGATGCCATCT  349

seq1  GAACATTCCAGGATTACATATTGTACTATGCATCATCTAGCTTCATTGTT  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATTCCAGGATTACATATTGTACTATGCATCATCTAGCTTCATTGTT  399

seq1  TTTTGCTTGAGTTCCAGAAGTTATGAACAAGTCACTTTTGCCACTTCAGT  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTTGAGTTCCAGAAGTTATGAACAAGTCACTTTTGCCACTTCAGT  449

seq1  ACTACAGATGGTGTATTAAGTCCTGAGACTGGCACTTCAGTTTCAGTTGG  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACAGATGGTGTATTAAGTCCTGAGACTGGCACTTCAGTTTCAGTTGG  499

seq1  CAGTGATGTGATTCAAAGCCTGGGTCTCTCCTCCTAGAATACTGCTGCCT  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGATGTGATTCAAAGCCTGGGTCTCTCCTCCTAGAATACTGCTGCCT  549

seq1  GCTCAGAGCCAGAGTCTCCATATGTGAGGGTCAGCTTGAGGATGAATGGT  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGAGCCAGAGTCTCCATATGTGAGGGTCAGCTTGAGGATGAATGGT  599

seq1  TATATTTCCTGACGCGGGGTATAGAGACACTTCCTTGGTTATTCTGGGTT  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTCCTGACGCGGGGTATAGAGACACTTCCTTGGTTATTCTGGGTT  649

seq1  TCACCTGACTCTTACAGATGAAGGATCTATGCAATCCACTGATCCCTCCA  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTGACTCTTACAGATGAAGGATCTATGCAATCCACTGATCCCTCCA  699

seq1  GCCAACTCTAATATTGACAGTGATATAGGCCATGAGTTAACTCCACTGAT  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAACTCTAATATTGACAGTGATATAGGCCATGAGTTAACTCCACTGAT  749

seq1  ACCGTAAGTCTTTATATATAATATTGGAAAGATCTGGAAGTTTTGTCTGT  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTAAGTCTTTATATATAATATTGGAAAGATCTGGAAGTTTTGTCTGT  799

seq1  CAGGCCTCTAGTTCATAGCTAGTACCAGATCACAAGTCATCAGGGTTGGC  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCTCTAGTTCATAGCTAGTACCAGATCACAAGTCATCAGGGTTGGC  849

seq1  TCTGACCTTCAAGGCAAAGCCCATGTGTCAGTTATCCTCCTCTGTTCCCC  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACCTTCAAGGCAAAGCCCATGTGTCAGTTATCCTCCTCTGTTCCCC  899

seq1  AGTAGAAGGAATTTTGCTTCCTCTGCTGCCTGAGAGAAAGGGTCCCGGAA  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAAGGAATTTTGCTTCCTCTGCTGCCTGAGAGAAAGGGTCCCGGAA  949

seq1  GCAGTCCCCAGGATATCTGCCTAATCAGGTTCCAGAGACGTTGTCCATAG  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCCCCAGGATATCTGCCTAATCAGGTTCCAGAGACGTTGTCCATAG  999

seq1  TCACTGTACAAGAGGCAGGGGACATGGGTCTCTGCTTGGCACTCACTGTA  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGTACAAGAGGCAGGGGACATGGGTCTCTGCTTGGCACTCACTGTA  1049

seq1  GCAGGCCAGATCCTGGAATTC  1059
      |||||||||||||||||||||
seq2  GCAGGCCAGATCCTGGAATTC  1070