BAC Information

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BAC

Clone NameB6Ng01-217O04
Chromosome8 (Build37)
Map Location 30,588,591 - 30,589,727
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666446, LOC100042598, Unc5d, LOC100041237
Downstream geneEG628189
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-217O04.bB6Ng01-217O04.g
ACCGA034159GA034160
length1,1061,133
definitionB6Ng01-217O04.b B6Ng01-217O04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctactagccttagcatatcaagttacagtaaaactggacacattt
ttttctatagctgctagaggaggcagattagttgcgggaaagagatccta
aggcaggcaatattgtcccctatgaagactgagatgcacagctgcgacat
atctgcagtgcacctaggtctgtcccatgcacactctctctttgacagtt
cagtccttatgagcccttatgggcccaggttagttgactctctaggtttc
ttgtgccttccttaactatcctggcctctttaatctctactccctctttt
ccaaaggattccccaacctccacttaatgtttggctgtgggtctcttcat
cagtttccatagttgctaggtaaagtctctctgataacagctaagctagg
ctcctggcttgaagtttagcaaaatatcattaatagtgtcacgtgtgggc
tccttttcatggcatggttctcaagcggggccagtcattggttgaccctt
tcctcaaattctgctccatcttttatccctgcacatcttttagacagaac
aaattatgaatctaaggtgttgtgactgggttggtgaccaaattcctccg
ttggaagactgtcctagtgacaggagatggctagtttaggctccatctat
ctcaatgctagggatcatagccagggtcacctcttagattcctgagattt
tgattgtcttatgtttcttttttttttttctttccattttttattaggta
tttagctcatttacatttccaatgctataccaaaagtcccccatacccac
ccacccccactcccctacccgcccactccccctttttggccctggagttc
ccctgtactggggcatataaagtttgcatgtcccattgggcctcttcttt
ccagtgatggccgactaggccatcttttgatacataatgcagctagagtc
aagagctccgggtactggttagttcatatgtggatccacttatagggatg
cagatcctttagctctgggtacctttctctagcctctcccattggagacc
tgatgatccatcccattacctgactgtgagacatccatttcttgttgttt
tgcagg

gaattcatctccaacaagaaatctagagttttcaaagtattccagacaat
gaaatacagaatatcaatccctaagtttcaatggtgaaaacaagaaagtc
tctcctcatatccaacccctaattctatgtttagtattggaaatgtgccg
tttagtaacagtagtgcccccatgcttggaactttagcctccagaggcac
agctacctggttcaacttgaaacactctgaatttgtttttttaagcaata
tagaatttgtgcaagaaaagcaggtgagttaaatgagttagaaacaatat
acacatatactttctcagtttttactgctggcaataaactctgcaacatt
tccacagagaatgggcctttgtgtttaccacaccagagggagcatacagg
atagattctaagtgtctaggcttcttagtttgcacttatattatccaata
gctgtatatgctcaataatgtatataacatgattgaccatatttcttgaa
tgtcaaattttaaagtttgaatgatgttgttcatggtgatatttgtacat
tttgaagggaaaagttgaagaaagtaaaagaaaagatttatcagaaatca
atgtccaaataatggtatataaagtattggagtgctagacaaatgggcca
gaatattttggagatttttaacaagttttacctgtgagaaaagcaatgaa
tcatgaaacgtgaaaacagtcaacttccaagcaataaaggtttccaaagg
tgacattttgcttgtgctggtttttagcacagatgaaagtattgttcttt
tattaagcaactgtctacttctgaaaatagttatggagtaggcattgccc
ttttcttcggtgttgaacaaatgattcatttcaaaatgttaagtagaaga
attttgcttaaaggatgggcatgcaggccttaatttataagtctttgaaa
gaggcagtgaagcacataaagaccatctgtctcatcggatggtcttactg
ctgctcaaactcagatctggtcattactccatcagatgcaccatagtggt
ttcagcatggcttgcgactacttaatcagaactacaagctttattccctt
tataagacaaactttatttggctttcatgcatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_30588591_30589727
seq2: B6Ng01-217O04.g_68_1200

seq1  GAATTCATCTCCAACAAGAAATCTAGAGTTTTCAAAGTATTCCAGACAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTCCAACAAGAAATCTAGAGTTTTCAAAGTATTCCAGACAAT  50

seq1  GAAATACAGAATATCAATCCCTAAGTTTCAATGGTGAAAACAAGAAAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATACAGAATATCAATCCCTAAGTTTCAATGGTGAAAACAAGAAAGTC  100

seq1  TCTCCTCATATCCAACCCCTAATTCTATGTTTAGTATTGGAAATGTGCCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCATATCCAACCCCTAATTCTATGTTTAGTATTGGAAATGTGCCG  150

seq1  TTTAGTAACAGTAGTGCCCCCATGCTTGGAACTTTAGCCTCCAGAGGCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTAACAGTAGTGCCCCCATGCTTGGAACTTTAGCCTCCAGAGGCAC  200

seq1  AGCTACCTGGTTCAACTTGAAACACTCTGAATTTGTTTTTTTAAGCAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACCTGGTTCAACTTGAAACACTCTGAATTTGTTTTTTTAAGCAATA  250

seq1  TAGAATTTGTGCAAGAAAAGCAGGTGAGTTAAATGAGTTAGAAACAATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTTGTGCAAGAAAAGCAGGTGAGTTAAATGAGTTAGAAACAATAT  300

seq1  ACACATATACTTTCTCAGTTTTTACTGCTGGCAATAAACTCTGCAACATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATATACTTTCTCAGTTTTTACTGCTGGCAATAAACTCTGCAACATT  350

seq1  TCCACAGAGAATGGGCCTTTGTGTTTACCACACCAGAGGGAGCATACAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAGAGAATGGGCCTTTGTGTTTACCACACCAGAGGGAGCATACAGG  400

seq1  ATAGATTCTAAGTGTCTAGGCTTCTTAGTTTGCACTTATATTATCCAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATTCTAAGTGTCTAGGCTTCTTAGTTTGCACTTATATTATCCAATA  450

seq1  GCTGTATATGCTCAATAATGTATATAACATGATTGACCATATTTCTTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTATATGCTCAATAATGTATATAACATGATTGACCATATTTCTTGAA  500

seq1  TGTCAAATTTTAAAGTTTGAATGATGTTGTTCATGGTGATATTTGTACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAATTTTAAAGTTTGAATGATGTTGTTCATGGTGATATTTGTACAT  550

seq1  TTTGAAGGGAAAAGTTGAAGAAAGTAAAAGAAAAGATTTATCAGAAATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGGGAAAAGTTGAAGAAAGTAAAAGAAAAGATTTATCAGAAATCA  600

seq1  ATGTCCAAATAATGGTATATAAAGTATTGGAGTGCTAGACAAATGGGCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCAAATAATGGTATATAAAGTATTGGAGTGCTAGACAAATGGGCCA  650

seq1  GAATATTTTGGAGATTTTTAACAAGTTTTACCTGTGAGAAAAGCAATGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTTTGGAGATTTTTAACAAGTTTTACCTGTGAGAAAAGCAATGAA  700

seq1  TCATGAAACGTGAAAACAGTCAACTTCCAAGCAATAAAGGTTTCCAAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAAACGTGAAAACAGTCAACTTCCAAGCAATAAAGGTTTCCAAAGG  750

seq1  TGACATTTTGCTTGTGCTGGTTTTTAGCACAGATGAAAGTATTGTTCTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATTTTGCTTGTGCTGGTTTTTAGCACAGATGAAAGTATTGTTCTTT  800

seq1  TATTAAGCAACTGTCTACTTCTGAAAATAGTTATGGAGTAGGCATTGCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAGCAACTGTCTACTTCTGAAAATAGTTATGGAGTAGGCATTGCCC  850

seq1  TTTTCTTCGGTGTTGAACAAAATGATTCATTTCAAAATGTTAAGTAGAAG  900
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTTTCTTCGGTGTTGAAC-AAATGATTCATTTCAAAATGTTAAGTAGAAG  899

seq1  AATTTTGCTTAAAGGATGGGCATGCAGGCCTTAATTTATAAGTCTTTGAA  950
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AATTTTGCTTAAAGGATGGGCATGCAGGCCTTAATTTATAAGTCTTTG-A  948

seq1  AAGAGGCAGTGAAGCACATAAAGAACCATCTGTCCTCATCGGATGGTCCT  1000
      ||||||||||||||||||||||| ||||||||| |||||||||||||| |
seq2  AAGAGGCAGTGAAGCACATAAAG-ACCATCTGT-CTCATCGGATGGTCTT  996

seq1  ACCTGCTGCTCCAAAACTCAGATCTGGTCAATTACTCCATCAAGATGCA-  1049
      | |||||||||  |||||||||||||||| ||||||||||| ||||||| 
seq2  A-CTGCTGCTC--AAACTCAGATCTGGTC-ATTACTCCATC-AGATGCAC  1041

seq1  CATAGT-GTTTCAGGCATG--CTGCGACTACTTATAATCAG-ACTACAGG  1095
      |||||| |||||| |||||   ||||||||||  ||||||| |||||| |
seq2  CATAGTGGTTTCA-GCATGGCTTGCGACTACT--TAATCAGAACTACAAG  1088

seq1  CTTTAATCC--TTAATAGACAAACTTTATTT-GCTTTCATGCATG  1137
      ||||| |||  |||  ||||||||||||||| |||||||||||||
seq2  CTTTATTCCCTTTATAAGACAAACTTTATTTGGCTTTCATGCATG  1133


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