BAC Information

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BAC

Clone NameB6Ng01-218B13
Chromosome8 (Build37)
Map Location 47,949,200 - 48,098,807
singlet/doubletdoublet
Overlap geneEnpp6
Upstream genePdlim3, Ccdc110, 1700029J07Rik, 1810047C23Rik, Ankrd37, Lrp2bp, Snx25, 4933411K20Rik, Slc25a4, LOC621269, LOC100039875, LOC667325, Helt, LOC667337, Acsl1, Mlf1ip, Ccdc111, Casp3, Irf2
Downstream geneStox2, 4930448N21Rik, D030016E14Rik, Rwdd4a, LOC384819, LOC667422, Ing2, LOC546058, Cdkn2aip, LOC100039801, Cldn22, Wwc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218B13.bB6Ng01-218B13.g
ACCGA034317GA034318
length1,0411,141
definitionB6Ng01-218B13.b B6Ng01-218B13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(48,097,762 - 48,098,807)(47,949,200 - 47,950,331)
sequence
gaattctcaaaaggcagagtgaatgttaagaaggtcgttagggacagtct
gctttagtcacctgctcattcctgtagtgttgactattttcaaagcatgg
tgtcaggtactgtgaaaagcataaaaaggggggggggtgacaaggcccag
cttagagggtctgacagtcaagactggaaaatgccacctagggatcctgt
gagaaatgcccagacagtgcaatactggaaaatgccatctagagatttgt
agaaaatgcccagacagcacaagaatggaaaatctagggatcatgtggga
aatgcccagacaacaaggagaaggtatgaggagggcctatgctgccatcc
actgagttctcataactctggagaagacaggtgtgtgggaaccatactct
agtgaaaagcgaatgtggataaacaaataaagtgaacagtctaaagggac
agctctacccagctcaaaagcttccagaagatgtcctaaactctgctatg
gaaataatataggttatcaactaatccatggatcatctcaatcaatcaat
caatcaataaatcaatcaatcaataaataaatatcaaccaaccaaccaaa
caaacaaacaaaaaccatatgatacactaatgagtcaaccctgttccaag
ctaacaaaatattcaagatactatgtgctagggacacacctaataataac
ggtaatagtggcaaccttcactccgagccaggctctgtgctgagagattt
tccagaatgaccttattacctgatggcagccttttggagtgaatatttta
catgccagacaataagacttgggtgaaaatagctccaatttcctcactat
taagtggtaaagctcaggaccagaaaataatttacacttattttaggtcc
ccttggtggttttaacagaattcaaacgtttgttgctgtggttgtttttg
tttaattcagagctggagaccgcaactcaaacttcaatcgggcccggtta
gatctcacctggcttagtcgcacctccacccttttagccct
gaattcaccagacaaggtcagagaaggagaagcctccctaatgaagggag
tctcccatattgtgcagagcccagaggctatctggtcatgttggactttg
accttaattagcatttttctcacattttcctttactagggttgccttggt
tggtcatggtgtcccttcatggcaatagaaaccctaactaagacacctca
agtgggctttcaactctgatgcctgatgctcgcggtcacatgaaacgtcc
aatgagtcaagtagactctggattctcgtcttgtgaaacccaagaatgaa
attcatggactacagacaggcttgtaggaagaaggctcttacagactggt
aggtaagagtgtatgaggaagagaagatagagacagagactctgcacagg
accaatgtgtaccagggaacagagtaccactgtgctgctggtttaggggt
ctctcagagcactgacagaagacctagggataggcatggggaggtggtca
gtccagctgaacctgccctgaggtatccagatgcctcacatcagtttcac
tcacatcgtcaggcatagcttccatgcaagagtagagatgaggacccaga
actttcttttggcattcctaattgcccccagtagggactttattgaactg
tgttggggtccttgacctacctgatgttcgggtgtcactttcctagcctc
tgcaccacgaaaacgtcagaggcaaagactgactggctccacaacttcat
tatcagagcagtttttgtattcagaatcaggtgaagtagaaacgtaaggg
gttctttggaaagccagttgtgttggatagtgttttgtaaaggcaaatat
gtgaaggaatggtttcattgacgtacacacaggtgaaagactaaggtaga
ttcatgaaggaatgtttcactgaagcagacacaagagaaaggatgttctg
ctaaagtaaaaaccggaaaggaaatgtgatgagggatgctttgctaacca
cacaacatgtattggttcaccctacaattgtgtagttgaactgcatttgt
ccagactttcatagaagagaaaacacacagaaaaaacctctggtgatgtg
cttgccagttcttgctgcttccatgacttgactgaattggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_48097762_48098807
seq2: B6Ng01-218B13.b_49_1089 (reverse)

seq1  AGGGCTAAGA-GGTGGAGGTCGGAACTAGGCAGGTGAGATGCTTACACGG  49
      |||||||| | |||||||||  ||   || |||||||||| || ||  ||
seq2  AGGGCTAAAAGGGTGGAGGTGCGACTAAGCCAGGTGAGAT-CTAACCGGG  49

seq1  CGCGATTGAAGTTTTGAGTTGC-GTCTCCAGCTCTGAAAATAAAAACAAA  98
      | ||||||||| |||||||||| |||||||||||||||     |||||||
seq2  CCCGATTGAAG-TTTGAGTTGCGGTCTCCAGCTCTGAA---TTAAACAAA  95

seq1  AAACAAACAAACAACAACAAAAAACAGTATGAAATACTGT--AAAACACC  146
      ||       ||| ||| ||| |||| || || ||| ||||  ||| ||||
seq2  AA------CAACCACAGCAACAAAC-GTTTG-AATTCTGTTAAAACCACC  137

seq1  -AGGGGACTTAAAATTAAGTGTAAATTA-TTTCTGGTCCTG-GCTTTACC  193
       ||||||| ||||| ||||||||||||| |||||||||||| ||||||||
seq2  AAGGGGACCTAAAA-TAAGTGTAAATTATTTTCTGGTCCTGAGCTTTACC  186

seq1  ACTTAATAGTGGGGAAA-TGGAGCTTATTTCACCCAAGTCTTATTGTCTG  242
      ||||||||||| ||||| |||||||  |||||||||||||||||||||||
seq2  ACTTAATAGTGAGGAAATTGGAGCTATTTTCACCCAAGTCTTATTGTCTG  236

seq1  GCATGTAAAATATTCACTCCAAAAGGCTGCCATCAGGTAATAAGGTCATT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTAAAATATTCACTCCAAAAGGCTGCCATCAGGTAATAAGGTCATT  286

seq1  CTGG-AAATCTCTCAGCACAGAGCCTGGCTCGGAGTGAAGGTTGCCACTA  341
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAAATCTCTCAGCACAGAGCCTGGCTCGGAGTGAAGGTTGCCACTA  336

seq1  TTACCGTTATTATTAGGTGTGTCCCTAGCACATAGTATCTTGAATATTTT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCGTTATTATTAGGTGTGTCCCTAGCACATAGTATCTTGAATATTTT  386

seq1  GTTAGCTTGGAACAGGGTTGACTCATTAGTGTATCATATGGTTTTTGTTT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGCTTGGAACAGGGTTGACTCATTAGTGTATCATATGGTTTTTGTTT  436

seq1  GTTTGTTTGGTTGGTTGGTTGATATTTATTTATTGATTGATTGATTTATT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTGGTTGGTTGGTTGATATTTATTTATTGATTGATTGATTTATT  486

seq1  GATTGATTGATTGATTGAGATGATCCATGGATTAGTTGATAACCTATATT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGATTGATTGATTGAGATGATCCATGGATTAGTTGATAACCTATATT  536

seq1  ATTTCCATAGCAGAGTTTAGGACATCTTCTGGAAGCTTTTGAGCTGGGTA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCATAGCAGAGTTTAGGACATCTTCTGGAAGCTTTTGAGCTGGGTA  586

seq1  GAGCTGTCCCTTTAGACTGTTCACTTTATTTGTTTATCCACATTCGCTTT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGTCCCTTTAGACTGTTCACTTTATTTGTTTATCCACATTCGCTTT  636

seq1  TCACTAGAGTATGGTTCCCACACACCTGTCTTCTCCAGAGTTATGAGAAC  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTAGAGTATGGTTCCCACACACCTGTCTTCTCCAGAGTTATGAGAAC  686

seq1  TCAGTGGATGGCAGCATAGGCCCTCCTCATACCTTCTCCTTGTTGTCTGG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGGATGGCAGCATAGGCCCTCCTCATACCTTCTCCTTGTTGTCTGG  736

seq1  GCATTTCCCACATGATCCCTAGATTTTCCATTCTTGTGCTGTCTGGGCAT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTCCCACATGATCCCTAGATTTTCCATTCTTGTGCTGTCTGGGCAT  786

seq1  TTTCTACAAATCTCTAGATGGCATTTTCCAGTATTGCACTGTCTGGGCAT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTACAAATCTCTAGATGGCATTTTCCAGTATTGCACTGTCTGGGCAT  836

seq1  TTCTCACAGGATCCCTAGGTGGCATTTTCCAGTCTTGACTGTCAGACCCT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACAGGATCCCTAGGTGGCATTTTCCAGTCTTGACTGTCAGACCCT  886

seq1  CTAAGCTGGGCCTTGTCACCCCCCCCCCTTTTTATGCTTTTCACAGTACC  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCTGGGCCTTGTCACCCCCCCCCCTTTTTATGCTTTTCACAGTACC  936

seq1  TGACACCATGCTTTGAAAATAGTCAACACTACAGGAATGAGCAGGTGACT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACCATGCTTTGAAAATAGTCAACACTACAGGAATGAGCAGGTGACT  986

seq1  AAAGCAGACTGTCCCTAACGACCTTCTTAACATTCACTCTGCCTTTTGAG  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGACTGTCCCTAACGACCTTCTTAACATTCACTCTGCCTTTTGAG  1036

seq1  AATTC  1046
      |||||
seq2  AATTC  1041

seq1: chr8_47949200_47950331
seq2: B6Ng01-218B13.g_63_1203

seq1  GAATTCACCAGACAAGGTCAGAGAAGGAGAAGCCTCCCTAATGAAGGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCAGACAAGGTCAGAGAAGGAGAAGCCTCCCTAATGAAGGGAG  50

seq1  TCTCCCATATTGTGCAGAGCCCAGAGGCTATCTGGTCATGTTGGACTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCATATTGTGCAGAGCCCAGAGGCTATCTGGTCATGTTGGACTTTG  100

seq1  ACCTTAATTAGCATTTTTCTCACATTTTCCTTTACTAGGGTTGCCTTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTAATTAGCATTTTTCTCACATTTTCCTTTACTAGGGTTGCCTTGGT  150

seq1  TGGTCATGGTGTCCCTTCATGGCAATAGAAACCCTAACTAAGACACCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCATGGTGTCCCTTCATGGCAATAGAAACCCTAACTAAGACACCTCA  200

seq1  AGTGGGCTTTCAACTCTGATGCCTGATGCTCGCGGTCACATGAAACGTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGCTTTCAACTCTGATGCCTGATGCTCGCGGTCACATGAAACGTCC  250

seq1  AATGAGTCAAGTAGACTCTGGATTCTCGTCTTGTGAAACCCAAGAATGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGTCAAGTAGACTCTGGATTCTCGTCTTGTGAAACCCAAGAATGAA  300

seq1  ATTCATGGACTACAGACAGGCTTGTAGGAAGAAGGCTCTTACAGACTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGGACTACAGACAGGCTTGTAGGAAGAAGGCTCTTACAGACTGGT  350

seq1  AGGTAAGAGTGTATGAGGAAGAGAAGATAGAGACAGAGACTCTGCACAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAGAGTGTATGAGGAAGAGAAGATAGAGACAGAGACTCTGCACAGG  400

seq1  ACCAATGTGTACCAGGGAACAGAGTACCACTGTGCTGCTGGTTTAGGGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATGTGTACCAGGGAACAGAGTACCACTGTGCTGCTGGTTTAGGGGT  450

seq1  CTCTCAGAGCACTGACAGAAGACCTAGGGATAGGCATGGGGAGGTGGTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAGAGCACTGACAGAAGACCTAGGGATAGGCATGGGGAGGTGGTCA  500

seq1  GTCCAGCTGAACCTGCCCTGAGGTATCCAGATGCCTCACATCAGTTTCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGCTGAACCTGCCCTGAGGTATCCAGATGCCTCACATCAGTTTCAC  550

seq1  TCACATCGTCAGGCATAGCTTCCATGCAAGAGTAGAGATGAGGACCCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATCGTCAGGCATAGCTTCCATGCAAGAGTAGAGATGAGGACCCAGA  600

seq1  ACTTTCTTTTGGCATTCCTAATTGCCCCCAGTAGGGACTTTATTGAACTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTTTTGGCATTCCTAATTGCCCCCAGTAGGGACTTTATTGAACTG  650

seq1  TGTTGGGGTCCTTGACCTACCTGATGTTCGGGTGTCACTTTCCTAGCCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGGGTCCTTGACCTACCTGATGTTCGGGTGTCACTTTCCTAGCCTC  700

seq1  TGCACCACGAAAACGTCAGAGGCAAAGACTGACTGGCTCCACAACTTCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCACGAAAACGTCAGAGGCAAAGACTGACTGGCTCCACAACTTCAT  750

seq1  TATCAGAGCAGTTTTTGTATTCAGAATCA-GTGAAGTAGAAACGTAA-GG  798
      ||||||||||||||||||||||||||||| ||||||||||||||||| ||
seq2  TATCAGAGCAGTTTTTGTATTCAGAATCAGGTGAAGTAGAAACGTAAGGG  800

seq1  GTTCTTTGGAAAGCCAGTTGTGTTGGATAGTGTTTTGTAAAGGCAAATAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTGGAAAGCCAGTTGTGTTGGATAGTGTTTTGTAAAGGCAAATAT  850

seq1  GTGAAGGAATGG-TTCATTGACGTACACACAGGTGAAAGACTAAGGTAGA  897
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GTGAAGGAATGGTTTCATTGACGTACACACAGGTGAAAGACTAAGGTAGA  900

seq1  TTCATGAAGGAATGTTTCACTGAAGCAGACACAAGAGAAAGGATGTTCTG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGAAGGAATGTTTCACTGAAGCAGACACAAGAGAAAGGATGTTCTG  950

seq1  CTAAAGTAAAAACCGGAAAGGAAATGTGATGAGGGATGCTTTGCTAACCA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGTAAAAACCGGAAAGGAAATGTGATGAGGGATGCTTTGCTAACCA  1000

seq1  CAC-ACATGTATTGGTCCACCCTAC-ATTGTGTAGTTGAACTGCATTTGT  1045
      ||| |||||||||||| |||||||| ||||||||||||||||||||||||
seq2  CACAACATGTATTGGTTCACCCTACAATTGTGTAGTTGAACTGCATTTGT  1050

seq1  CCAGAC-TTCATAG-AGAG-AAACACACAG-AAAAACTTCTGGTGATGTG  1091
      |||||| ||||||| |||| |||||||||| |||||| ||||||||||||
seq2  CCAGACTTTCATAGAAGAGAAAACACACAGAAAAAACCTCTGGTGATGTG  1100

seq1  C-TGCAGTTTCTTGCTGCTTCCATGGACTTGGACTG-ATTGGC  1132
      | |||   |||||||||||||||| ||||| ||||| ||||||
seq2  CTTGCCAGTTCTTGCTGCTTCCAT-GACTT-GACTGAATTGGC  1141