BAC Information

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BAC

Clone NameB6Ng01-218C04
Chromosome8 (Build37)
Map Location 88,842,620 - 88,843,791
singlet/doubletsinglet
Overlap genenone
Upstream geneD830007F02Rik, 4921524J17Rik, Gpt2, Dnaja2, Neto2, Itfg1, LOC100040798, Phkb, LOC671665, LOC100040165
Downstream geneAbcc12, Lonp2, Siah1a, ENSMUSG00000074178, BC004022, LOC666960, EG625298, EG330819
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218C04.bB6Ng01-218C04.g
ACCGA034345GA034346
length1,1781,203
definitionB6Ng01-218C04.b B6Ng01-218C04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccattctcagcaactcttctttctgactcactctttttgaggcag
ttcaagtggaaaaaaatgcttagctgcgagtgtaaaaccctcattcagca
acaacaataaaaccctttagtttaatgcaagggcctaagtgagcttcatt
tttcacgtacattatttagcataatcatatctactgtttgttctctctct
ctctctctctctctctctctctcgttattttgttttagagactctttctt
ccaacctcctcaaaaaaatgttttagctctgtggagcattcatctttttt
tcttactcatctcatggttattagctataaaaaaaatccccttgggcaag
aggttccacctttattggtcccttcaatgagcagttttctgtaaatattg
cataatcatatctgggtgaaagtgatgctcttgtatctgaattcttggta
gcctgccctgaagacagcccatgctgggtcccccaccaaactgatacaga
ttccagcatctgaacacctctcttgttccagcttccttcttttttcctta
gtgtgattcctacatgaccttggagccagactctgacacttagtatctat
ttgaccttggataagatacttatctctggcttttatctttatctataaac
tgaacggtacctaatttataaggctgtggtgaagaccaagtgagtaaaca
catgtaatgtactaataggatgccaagagagtcctaactgagtactaagc
attcagtatgtccgcttctcctcttcatctttcctgaagtaagatggttt
caccatatgcttccaagggatgatctaaaaccagcccctttgtgggcagt
gcttctaaaatctgtgctggctctattagcttgctggctcatgaaaagtg
catcccagtagttatcatggaggagaggcagcctactactcatgtatgga
gaagatgctcccagtacttacatcatggagaaggtataggctagtgccat
ggtggtgaaagagttggctaagttgatgaacacagtaggtagtggtcatg
ttggctatgtccttactagatcacttgctttcacctcagatcctttaagg
aggccttaaatacatgaggaaagcaccacaaaaacagttagttcatttcc
ttcattccattgatatatacatcggtga
gaattcagtaaaaatgttgcctattcagtgacattcagaattgcttctag
tattgtaagaaagatagtgataggaaacaggcattactatctactacata
gagttagaaatctcagggcaagcttagcaaagtaagtttagaattcttac
tatagttatgtatggcagactacattacttactagtagaaagtacccccc
accgcccctctgcaatcacttagaataaaagctgagtcactcacatatac
aggaatttacaatggtttaggaagtagatcaggctgtggtttgaggagga
tctagaatattgcattactcatgagaaggttagctagagcagaactccct
aattagaaccatgacttgggcatgaaagcccttgccctgggagtgtaaag
acctcacacctggcttctaagaatatagctgaccttagatagaactgact
ttgtctcagttgttttattgcccagttcctgccagtcttttatgtttgca
ttcctctgttttgagtaagagtcattaaacatctggtaacttcattatac
cttggctgatgtgtcacctcacttccctattttcttctgtattaaaactc
tgatactcgctttgagaaaattacattcatataccacactcccttgtgtc
catgtctgtttgtcacccttttctcaccaactcctgcccacctgtaacca
gaaccccgatttctccagcggattgagaggggctgactgagactggtcca
cggcattaatgcatcattttcttactaaaactcattaagaacacagtacc
actggctccattttacacacgaaaaatatgcttgaagatctagatgcaca
gctgggaatcaaatcaaacaagatcatttgggaccactgggctatgctct
ttttccgacaaggcagaggggggtgtggattccatagttctccaagtctt
ctgaggacatggtactctacagcagattattccccagtgaacacaaatct
aactccactgacacttgcttaaagtgtgtcactttggcagagatgcgtga
gcacagtgtagcctagaacacaggcacatgtgacatatgtcttgagaaac
cagctgaaatttttctgactgagaccacatcagaatgcaagctgaactgc
gttttggatcaggccttgggcacaagatcttctttggaagatgtcgaaca
gtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_88842620_88843791
seq2: B6Ng01-218C04.b_42_1219

seq1  GAATTCCATTCTCAGCAACTCTTCTTTCTGACTCACTCTTTTTGAGGCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTCTCAGCAACTCTTCTTTCTGACTCACTCTTTTTGAGGCAG  50

seq1  TTCAAGTGGAAAAAAATGCTTAGCTGCGAGTGTAAAACCCTCATTCAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGTGGAAAAAAATGCTTAGCTGCGAGTGTAAAACCCTCATTCAGCA  100

seq1  ACAACAATAAAACCCTTTAGTTTAATGCAAGGGCCTAAGTGAGCTTCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAATAAAACCCTTTAGTTTAATGCAAGGGCCTAAGTGAGCTTCATT  150

seq1  TTTCACGTACATTATTTAGCATAATCATATCTACTGTTTGTTCTCTCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACGTACATTATTTAGCATAATCATATCTACTGTTTGTTCTCTCTCT  200

seq1  CTCTCTCTCTCTCTCTCTCTCTCGTTATTTTGTTTTAGAGACTCTTTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCGTTATTTTGTTTTAGAGACTCTTTCTT  250

seq1  CCAACCTCCTCAAAAAAATGTTTTAGCTCTGTGGAGCATTCATCTTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCTCCTCAAAAAAATGTTTTAGCTCTGTGGAGCATTCATCTTTTTT  300

seq1  TCTTACTCATCTCATGGTTATTAGCTATAAAAAAAATCCCCTTGGGCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACTCATCTCATGGTTATTAGCTATAAAAAAAATCCCCTTGGGCAAG  350

seq1  AGGTTCCACCTTTATTGGTCCCTTCAATGAGCAGTTTTCTGTAAATATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCCACCTTTATTGGTCCCTTCAATGAGCAGTTTTCTGTAAATATTG  400

seq1  CATAATCATATCTGGGTGAAAGTGATGCTCTTGTATCTGAATTCTTGGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATCATATCTGGGTGAAAGTGATGCTCTTGTATCTGAATTCTTGGTA  450

seq1  GCCTGCCCTGAAGACAGCCCATGCTGGGTCCCCCACCAAACTGATACAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCCCTGAAGACAGCCCATGCTGGGTCCCCCACCAAACTGATACAGA  500

seq1  TTCCAGCATCTGAACACCTCTCTTGTTCCAGCTTCCTTCTTTTTTCCTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGCATCTGAACACCTCTCTTGTTCCAGCTTCCTTCTTTTTTCCTTA  550

seq1  GTGTGATTCCTACATGACCTTGGAGCCAGACTCTGACACTTAGTATCTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGATTCCTACATGACCTTGGAGCCAGACTCTGACACTTAGTATCTAT  600

seq1  TTGACCTTGGATAAGATACTTATCTCTGGCTTTTATCTTTATCTATAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCTTGGATAAGATACTTATCTCTGGCTTTTATCTTTATCTATAAAC  650

seq1  TGAACGGTACCTAATTTATAAGGCTGTGGTGAAGACCAAGTGAGTAAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACGGTACCTAATTTATAAGGCTGTGGTGAAGACCAAGTGAGTAAACA  700

seq1  CATGTAATGTACTAATAGGATGCCAAGAGAGTCCTAACTGAGTACTAAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAATGTACTAATAGGATGCCAAGAGAGTCCTAACTGAGTACTAAGC  750

seq1  ATTCAGTATGTCCGCTTCTCCTCTTCATCTTTCCTGAAGTAAGATGGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGTATGTCCGCTTCTCCTCTTCATCTTTCCTGAAGTAAGATGGTTT  800

seq1  CACCATATGCTTCCAAGGGATGATCTAAAACCAGCCCCTTTGTGGGCAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATATGCTTCCAAGGGATGATCTAAAACCAGCCCCTTTGTGGGCAGT  850

seq1  GCTTCTAAAATCTGTGCTGGCTCTATTAGCTTGCTGGCTCATGAAAAGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTAAAATCTGTGCTGGCTCTATTAGCTTGCTGGCTCATGAAAAGTG  900

seq1  CATCCCAGTAGTTATCATGGAGGAGAGGCAGCCTACTACTCATGTATGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCAGTAGTTATCATGGAGGAGAGGCAGCCTACTACTCATGTATGGA  950

seq1  GAAGATGCTCCCAGTACTTACATCATGGAGAAGGTATAGGCTAGTGCCAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATGCTCCCAGTACTTACATCATGGAGAAGGTATAGGCTAGTGCCAT  1000

seq1  GGTGGTGAAAGAGTTGGCTAAGTTGATGAACACAGTAGGTAGTGGTCATG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTGAAAGAGTTGGCTAAGTTGATGAACACAGTAGGTAGTGGTCATG  1050

seq1  TTGGCTATGT-CTTACTAGATCACTTGCTTTCAACTCAGAT-CTTTAAGG  1098
      |||||||||| |||||||||||||||||||||| ||||||| ||||||||
seq2  TTGGCTATGTCCTTACTAGATCACTTGCTTTCACCTCAGATCCTTTAAGG  1100

seq1  AGG-CTTAAATACATGAAGAAAAGCAACAACAAAACAGTAAGTTCA-TTC  1146
      ||| |||||||||||| || |||||| ||  |||||||| |||||| |||
seq2  AGGCCTTAAATACATG-AGGAAAGCACCACAAAAACAGTTAGTTCATTTC  1149

seq1  CTTCATT-CATTG--ATATACATCGGTGA  1172
      ||||||| |||||  ||||||||||||||
seq2  CTTCATTCCATTGATATATACATCGGTGA  1178