BAC Information

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BAC

Clone NameB6Ng01-219P14
Chromosome8 (Build37)
Map Location 99,669,831 - 99,724,951
singlet/doubletdoublet
Overlap geneLOC333331
Upstream genenone
Downstream geneLOC546090, LOC636859, EG384885, LOC100041173
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219P14.bB6Ng01-219P14.g
ACCGA035654GA035655
length1,1331,099
definitionB6Ng01-219P14.b B6Ng01-219P14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,669,831 - 99,670,972)(99,723,846 - 99,724,951)
sequence
gaattcctccataaaggcatacaactctactcaccccaaatagggaactt
gatacaaaccaaagtaacaatggtgccaaagttcaacttggtgcactaat
gagtttttatttcctaacaggagtatagtgaagagttacatgcaggagca
gggatgactccatatcaataacaatacttcctacccctaacccacccccc
cctgcaccaatatgggtgaaactgactaaagtttctggagctctctcctc
tatttgcatgcagctaaaggggtttgacactctccatatctgtatacctc
agaatcttctcttttggtagttgtttgctgttttccaagttggaagggtt
ctttgaggtttgcatcattcccagacacatggtattaaactgcctccaga
gtcccacaagcctcctcccttcttcctggagcaagtgtgtcaattcagag
gaaaccatgaaatagcagttgttttccctggcttatcttggaggaagtac
agggtgggaaagacagataaaacaagaatcttcagttttaaggtttttta
tttattattttattagttattaatagaatatgtcaacatattctatttta
ttgtgatgaaatgtttaataacagaagtacattcttaccacacatccaaa
tgttccatagagtatcattgtctataggaacaatgcagatctctgcagct
tatactgcttaagtgtaattttgcaatgattgcttggtgaccttgtttct
gcttctctcactggctctaacattcaccattccaccctgattctataact
ttaagtgaaaatattacttaattgttttcttctgagcaataatcaactgt
gtacatcaccaggtgccaataatcacctccatctgagtagcagtagtttt
gatttcctttttctatgcagccactaattttcatgctgtagttattcaag
ttctcagtttatatagcacttcatctgagaagctttcctgaagccatgaa
attacagcacaatgctcctaccccgtgttctgtggtgtctatgtttagtg
ttaaatgagtctcatcactggctctttcccataacagaataaaagcattt
gtatattattgcaattctattgctgtatattat

gaattctatccctccattcctagcttactgagggctttcttgaacgtaga
tagaaatattgaaatgctttttactgaatctgctgagaaaatcacgtggt
tcttagttgtttctaaaagttaaggctaattttcacctcttccccaccac
ctcactgcagtagggtctgaacctaggccctcatatatgcccaaatatac
tagtcaaaaagctctattattaaaccataactcccaatggttttctttta
gtttccttaaactgtgagattgagtctcattaagttacacaggcagactt
gactttgctctagactgcctctgcatttgtgattctcctgcctcagcttt
ccattcagctgcaactacagatctctgggaccaggcctagctgaagttgc
aattctaagatagaccttccttgctgctagcaaactgtccgtcttatata
attaggaatttaatgtgctcattctgttaaaatttccctctgtgcttatg
aactggaatggcttatttgcttattgattttgtaatgactttgcttctgg
tgcctttgttataatggcctcataaataatcaaggaagcattttctcctt
gtttgttgtgtatggaaagaataacaattttcttcttacgtgtgtgttgc
tggggacaatacttagggtcctatgcacactggactcagagtcaaccgac
aagcttttcttcccacccaagagtcatgactatatttagcagcttcaaaa
acacttatgagaggagactcgtgcaactttctttacaaaaagagttttat
ttataaatcaagtacgttaatataacaaagataagtggatattagaacat
aatagatagatgatagagtataagctagatttataaccttgtatcagatt
tgctaaatgacagtattaaagggatatggtccctctggggtgtttaacta
cctctgaatatgtgatttagacactacatattcctttaaatacttgtgtg
ttagtgtttctcttctttacagaaaactttagcattttctagtatcagtt
ctacataagcttcattacttttgtgccttacttacagagcaaccatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_99669831_99670972
seq2: B6Ng01-219P14.b_47_1179

seq1  GAATTCCTCCATAAAGGCATACAACTCTACTCACCCCAAATAGGGAACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCATAAAGGCATACAACTCTACTCACCCCAAATAGGGAACTT  50

seq1  GATACAAACCAAAGTAACAATGGTGCCAAAGTTCAACTTGGTGCACTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAAACCAAAGTAACAATGGTGCCAAAGTTCAACTTGGTGCACTAAT  100

seq1  GAGTTTTTATTTCCTAACAGGAGTATAGTGAAGAGTTACATGCAGGAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTTTATTTCCTAACAGGAGTATAGTGAAGAGTTACATGCAGGAGCA  150

seq1  GGGATGACTCCATATCAATAACAATACTTCCTACCCCTAACCCACCCCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGACTCCATATCAATAACAATACTTCCTACCCCTAACCCACCCCCC  200

seq1  CCTGCACCAATATGGGTGAAACTGACTAAAGTTTCTGGAGCTCTCTCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCACCAATATGGGTGAAACTGACTAAAGTTTCTGGAGCTCTCTCCTC  250

seq1  TATTTGCATGCAGCTAAAGGGGTTTGACACTCTCCATATCTGTATACCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGCATGCAGCTAAAGGGGTTTGACACTCTCCATATCTGTATACCTC  300

seq1  AGAATCTTCTCTTTTGGTAGTTGTTTGCTGTTTTCCAAGTTGGAAGGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCTTCTCTTTTGGTAGTTGTTTGCTGTTTTCCAAGTTGGAAGGGTT  350

seq1  CTTTGAGGTTTGCATCATTCCCAGACACATGGTATTAAACTGCCTCCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAGGTTTGCATCATTCCCAGACACATGGTATTAAACTGCCTCCAGA  400

seq1  GTCCCACAAGCCTCCTCCCTTCTTCCTGGAGCAAGTGTGTCAATTCAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCACAAGCCTCCTCCCTTCTTCCTGGAGCAAGTGTGTCAATTCAGAG  450

seq1  GAAACCATGAAATAGCAGTTGTTTTCCCTGGCTTATCTTGGAGGAAGTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCATGAAATAGCAGTTGTTTTCCCTGGCTTATCTTGGAGGAAGTAC  500

seq1  AGGGTGGGAAAGACAGATAAAACAAGAATCTTCAGTTTTAAGGTTTTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGGGAAAGACAGATAAAACAAGAATCTTCAGTTTTAAGGTTTTTTA  550

seq1  TTTATTATTTTATTAGTTATTAATAGAATATGTCAACATATTCTATTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTATTTTATTAGTTATTAATAGAATATGTCAACATATTCTATTTTA  600

seq1  TTGTGATGAAATGTTTAATAACAGAAGTACATTCTTACCACACATCCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGATGAAATGTTTAATAACAGAAGTACATTCTTACCACACATCCAAA  650

seq1  TGTTCCATAGAGTATCATTGTCTATAGGAACAATGCAGATCTCTGCAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCATAGAGTATCATTGTCTATAGGAACAATGCAGATCTCTGCAGCT  700

seq1  TATACTGCTTAAGTGTAATTTTGCAATGATTGCTTGGTGACCTTGTTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTGCTTAAGTGTAATTTTGCAATGATTGCTTGGTGACCTTGTTTCT  750

seq1  GCTTCTCTCACTGGCTCTAACATTCACCATTCCACCCTGATTCTATAACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTCTCACTGGCTCTAACATTCACCATTCCACCCTGATTCTATAACT  800

seq1  TTAAGTGAAAATATTACTTAATTGTTTTCTTCTGAGCAATAATCAACTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTGAAAATATTACTTAATTGTTTTCTTCTGAGCAATAATCAACTGT  850

seq1  GTACATCACCAGGTGCCAATAATCACCTCCATCTGAGTAGCAAGTAGTTT  900
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GTACATCACCAGGTGCCAATAATCACCTCCATCTGAGTAGC-AGTAGTTT  899

seq1  TGATTTCC-TTTTCTATGCAGCCACTAATTTTCATGCTGTAGTTATTCAA  949
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCCTTTTTCTATGCAGCCACTAATTTTCATGCTGTAGTTATTCAA  949

seq1  GTTCTCAGTTTATATAGCACTTCATCTGAGAAGCTTTCCTGAAGCCATGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCAGTTTATATAGCACTTCATCTGAGAAGCTTTCCTGAAGCCATGA  999

seq1  AATTACAGCAC-ATGCTCCTACCCCGTGTTCTGTTGGTGTCTATGTTTAG  1048
      ||||||||||| ||||||||||||||||||||| ||||||||||||||||
seq2  AATTACAGCACAATGCTCCTACCCCGTGTTCTG-TGGTGTCTATGTTTAG  1048

seq1  TTGTTTAATGAGTCTCATCACTTGCTCTTTCCCATTAAACAGAATAAAAA  1098
       |||| |||||||||||||||| ||||||||||||  |||||||| ||||
seq2  -TGTTAAATGAGTCTCATCACTGGCTCTTTCCCAT--AACAGAAT-AAAA  1094

seq1  GCAATTTGTAATATTATTGGAAATTCTTAATGGCTGTATATTAT  1142
      || |||||| |||||||| | ||||||  || ||||||||||||
seq2  GC-ATTTGT-ATATTATT-GCAATTCT--ATTGCTGTATATTAT  1133


seq1: chr8_99723846_99724951
seq2: B6Ng01-219P14.g_67_1165 (reverse)

seq1  AAAATGGGTTTGCTCTGGTAGTAAAGCCACAAAAGTAATGAAGCTTTATG  50
      |||||||  ||||||||  ||| ||| ||||||||||||||||| |||||
seq2  AAAATGG--TTGCTCTGTAAGT-AAGGCACAAAAGTAATGAAGC-TTATG  46

seq1  TAG-ACTGATTAACTAGAAAATGCTAAAGTTTTCTGTAAAAGAGAAGAAA  99
      ||| ||||||  ||||||||||||||||||||||||| |||||  |||||
seq2  TAGAACTGAT--ACTAGAAAATGCTAAAGTTTTCTGT-AAAGAAGAGAAA  93

seq1  CAACTAACACACAAGTA-TTAAAGGAATATGTAGTGTCTAAATCACCATA  148
      | ||||||||||||||| ||||||||||||||||||||||||||| ||||
seq2  C-ACTAACACACAAGTATTTAAAGGAATATGTAGTGTCTAAATCA-CATA  141

seq1  TTCAGAGGTAGTTAAACAACCCAGAGGGACCATATCCCTTTAATACTGTC  198
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTCAGAGGTAGTTAAACACCCCAGAGGGACCATATCCCTTTAATACTGTC  191

seq1  ATTTAGCAAATCTGATACAAGGTTATAAATCTAGCTTATACTCTATCATC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGCAAATCTGATACAAGGTTATAAATCTAGCTTATACTCTATCATC  241

seq1  TATCTATTATGTTCTAATATCCACTTATCTTTGTTATATTAACGTACTTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTATTATGTTCTAATATCCACTTATCTTTGTTATATTAACGTACTTG  291

seq1  ATTTATAAATAAAACTCTTTTTGTAAAGAAAGTTGCACGAGTCTCCTCTC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATAAATAAAACTCTTTTTGTAAAGAAAGTTGCACGAGTCTCCTCTC  341

seq1  ATAAGTGTTTTTGAAGCTGCTAAATATAGTCATGACTCTTGGGTGGGAAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTGTTTTTGAAGCTGCTAAATATAGTCATGACTCTTGGGTGGGAAG  391

seq1  AAAAGCTTGTCGGTTGACTCTGAGTCCAGTGTGCATAGGACCCTAAGTAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCTTGTCGGTTGACTCTGAGTCCAGTGTGCATAGGACCCTAAGTAT  441

seq1  TGTCCCCAGCAACACACACGTAAGAAGAAAATTGTTATTCTTTCCATACA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCCAGCAACACACACGTAAGAAGAAAATTGTTATTCTTTCCATACA  491

seq1  CAACAAACAAGGAGAAAATGCTTCCTTGATTATTTATGAGGCCATTATAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAACAAGGAGAAAATGCTTCCTTGATTATTTATGAGGCCATTATAA  541

seq1  CAAAGGCACCAGAAGCAAAGTCATTACAAAATCAATAAGCAAATAAGCCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGCACCAGAAGCAAAGTCATTACAAAATCAATAAGCAAATAAGCCA  591

seq1  TTCCAGTTCATAAGCACAGAGGGAAATTTTAACAGAATGAGCACATTAAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGTTCATAAGCACAGAGGGAAATTTTAACAGAATGAGCACATTAAA  641

seq1  TTCCTAATTATATAAGACGGACAGTTTGCTAGCAGCAAGGAAGGTCTATC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAATTATATAAGACGGACAGTTTGCTAGCAGCAAGGAAGGTCTATC  691

seq1  TTAGAATTGCAACTTCAGCTAGGCCTGGTCCCAGAGATCTGTAGTTGCAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATTGCAACTTCAGCTAGGCCTGGTCCCAGAGATCTGTAGTTGCAG  741

seq1  CTGAATGGAAAGCTGAGGCAGGAGAATCACAAATGCAGAGGCAGTCTAGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATGGAAAGCTGAGGCAGGAGAATCACAAATGCAGAGGCAGTCTAGA  791

seq1  GCAAAGTCAAGTCTGCCTGTGTAACTTAATGAGACTCAATCTCACAGTTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGTCAAGTCTGCCTGTGTAACTTAATGAGACTCAATCTCACAGTTT  841

seq1  AAGGAAACTAAAAGAAAACCATTGGGAGTTATGGTTTAATAATAGAGCTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAACTAAAAGAAAACCATTGGGAGTTATGGTTTAATAATAGAGCTT  891

seq1  TTTGACTAGTATATTTGGGCATATATGAGGGCCTAGGTTCAGACCCTACT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACTAGTATATTTGGGCATATATGAGGGCCTAGGTTCAGACCCTACT  941

seq1  GCAGTGAGGTGGTGGGGAAGAGGTGAAAATTAGCCTTAACTTTTAGAAAC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGAGGTGGTGGGGAAGAGGTGAAAATTAGCCTTAACTTTTAGAAAC  991

seq1  AACTAAGAACCACGTGATTTTCTCAGCAGATTCAGTAAAAAGCATTTCAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAGAACCACGTGATTTTCTCAGCAGATTCAGTAAAAAGCATTTCAA  1041

seq1  TATTTCTATCTACGTTCAAGAAAGCCCTCAGTAAGCTAGGAATGGAGGGA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTATCTACGTTCAAGAAAGCCCTCAGTAAGCTAGGAATGGAGGGA  1091

seq1  TAGAATTC  1106
      ||||||||
seq2  TAGAATTC  1099


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