BAC Information

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BAC

Clone NameB6Ng01-222G04
Chromosome8 (Build37)
Map Location 25,460,081 - 25,603,444
singlet/doubletdoublet
Overlap gene1810011O10Rik
Upstream geneSfrp1, LOC100040931, Zmat4
Downstream geneIndol1, Indo, Adam18, Adam3, Adam5, Adam32, Adam9, Tm2d2, Htra4, Plekha2, LOC100042390, Tacc1, LOC670822, LOC100040998
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-222G04.bB6Ng01-222G04.g
ACCGA037418GA037419
length1,0451,165
definitionB6Ng01-222G04.b B6Ng01-222G04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,602,401 - 25,603,444)(25,460,081 - 25,460,676)
sequence
gaattccatctttccttttatgtgtaaagttctgatttctgaaatgcaaa
atcgtagctcattagtgctcaagcaacatttaagagaggagtgagcaggg
aggcctgacggggctgggtggaggggacatcctcttggagacggagagga
gggggaggtacgggataaggaactgtcagagggaggactgagaagggata
acgactagactgaaaaaaaaaaagattaaagataatttttaaaaggtatt
ttaaaaaaaggagcattggtgttaatttttctttacagtggaatacacca
gggaacacaggtgtgtctgggtttcttcagttgacctttctccttcagct
tcttacagaccagtgtaaagcattttgttttcttggctccatttataccc
caaatctttttcacttcttttagattttttaaaagtttgttggagcatag
ggtttgcagtcaagtcttaatgatctgggttttgttgctctctgctgcta
ctgcagcttgtcatccgaggtggctttgttaattaaatgcagggatggag
gaaaaaaaatgactgtattacaaatatgcttggagtcattctccatttgc
aacaaattcacttaaatgtctgccttgctccctagaaaacaatgactaac
atcgatgaagtgtgcagtgctcattccacccctgcagggactagtctaga
gatgttttctgtgtcagctcacctcttacttggctccctctctatacaga
atgtgtccagtcacactgtaaatgcaaggcaggactggcttgtcacccag
gtggctgggtagcccttttctctggatagtgcttctctgcagcatcccgg
taaagagaatgacatgcagaatctctaatgttataaatgaaccccaaact
ccagaggctgcgctgaggctagagcaccctgagcttgagtccccaccccc
cacgccccatcccagcattgcaaacgtagaataaagcaaaaggcctaaat
cttaaagtctaggaagccgtttcagaacacgtgaatcgtgattgt
gaattcaataaagagcaacactgatgaggacagaagggagagagagggag
agacagacagacagacagacagaccaacacagacagagacacagagagaa
agagagagaaacaaacactttttgataataactttaaatatcagtgactt
taatttttcaatcaaaaaaccacaaatatagataacagactaagaaccaa
agtctacctttttgttgtctgcaagaaactcatcttagctttaaataagc
aatgccatgaagtgaatgacaggggagacagaattccatgcaaatgggac
caggaagaaccagaattcactaccttaatatctgacaaagtagactacaa
actaatacttaagaggtaaagaaggacatcttttttctcactaaggaaac
agttaatcaaaagacactgcaatcctaaacctataaaccagactctgtac
ccagttccataaagagcagactactgcaattaaaggcacagaataacatc
caaccattagtagaggtggtttcaggacccacatttctccaataatgggt
cttctggacaaaaaaataaacagagaaatagcataattaaatgacatcat
ataccaaagggacctaaacaatatctatagaatgttccacaaagtatata
cattctactcagcagcccagtggacacttatctaacatgaaccacatcct
gtgacacaaaacaaaccttaccaaattcagaaaagtggaaataactctat
atgtgctctatgaccataatacaataaaagcaaggactacagccatcaaa
tctctactaattataccaactgatggagattaaacaactcactattcaat
gatgaacaggtcagaaaagaaataacagaagaataaaacactcccagaac
taaacaacaattaaaaaaaaaccaaaataccacaaaactactggggcacg
ttgaaagcagtcctgtgagggaaactcatagccctggatacctacattaa
ataaaatcgagaggcccatttcctgcatgatgtcctttgaaatgggaagg
tatgagttactaaatactcatcttgtgtatcctctcttctcatgaataaa
ctcacaacaaagcttcttatgtagaaggttcatctgtgaaacctactcct
gcagactgtgatcgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_25602401_25603444
seq2: B6Ng01-222G04.b_46_1090 (reverse)

seq1  ACAATCAC-ATTCACGTTGTCTGAAACGGCTTCCTAGACTTTAAGGTTTA  49
      |||||||| ||||||||  |||||||||||||||||||||||||| ||| 
seq2  ACAATCACGATTCACGTGTTCTGAAACGGCTTCCTAGACTTTAAGATTT-  49

seq1  AGGCCTTTTGCTTTATTCTACGTTTGCAATGCTGGGATTGGGGCGTGGGG  99
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGGCCTTTTGCTTTATTCTACGTTTGCAATGCTGGGA-TGGGGCGTGGGG  98

seq1  GGTGGGGACTCAAGCTCAGGGCTGCTCTAGCCTCAGCGCAGCCTCTGGAG  149
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GGTGGGGACTCAAGCTCAGGG-TGCTCTAGCCTCAGCGCAGCCTCTGGAG  147

seq1  TTTGGGGTTCATTTATAACATTAG-GATTCTGCATGTCATTCTCTTTACC  198
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TTTGGGGTTCATTTATAACATTAGAGATTCTGCATGTCATTCTCTTTACC  197

seq1  GGGATGCTGCAGAG-AGCACTATCCAGAG-AAAGGGCTTACCAGCCACCT  246
      |||||||||||||| |||||||||||||| ||||||||  ||||||||||
seq2  GGGATGCTGCAGAGAAGCACTATCCAGAGAAAAGGGCTACCCAGCCACCT  247

seq1  GGGTGACAAGCCAGTCCTGCCTTGCATTTACAGTGTGACTGGACACATTC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGACAAGCCAGTCCTGCCTTGCATTTACAGTGTGACTGGACACATTC  297

seq1  TGTATAGAGAGGGAGCCAAGTAAGAGGTGAGCTGACACAGAAAACATCTC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAGAGAGGGAGCCAAGTAAGAGGTGAGCTGACACAGAAAACATCTC  347

seq1  TAGACTAGTCCCTGCAGGGGTGGAATGAGCACTGCACACTTCATCGATGT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTAGTCCCTGCAGGGGTGGAATGAGCACTGCACACTTCATCGATGT  397

seq1  TAGTCATTGTTTTCTAGGGAGCAAGGCAGACATTTAAGTGAATTTGTTGC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCATTGTTTTCTAGGGAGCAAGGCAGACATTTAAGTGAATTTGTTGC  447

seq1  AAATGGAGAATGACTCCAAGCATATTTGTAATACAGTCATTTTTTTTCCT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGAGAATGACTCCAAGCATATTTGTAATACAGTCATTTTTTTTCCT  497

seq1  CCATCCCTGCATTTAATTAACAAAGCCACCTCGGATGACAAGCTGCAGTA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCCTGCATTTAATTAACAAAGCCACCTCGGATGACAAGCTGCAGTA  547

seq1  GCAGCAGAGAGCAACAAAACCCAGATCATTAAGACTTGACTGCAAACCCT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAGAGAGCAACAAAACCCAGATCATTAAGACTTGACTGCAAACCCT  597

seq1  ATGCTCCAACAAACTTTTAAAAAATCTAAAAGAAGTGAAAAAGATTTGGG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCCAACAAACTTTTAAAAAATCTAAAAGAAGTGAAAAAGATTTGGG  647

seq1  GTATAAATGGAGCCAAGAAAACAAAATGCTTTACACTGGTCTGTAAGAAG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAAATGGAGCCAAGAAAACAAAATGCTTTACACTGGTCTGTAAGAAG  697

seq1  CTGAAGGAGAAAGGTCAACTGAAGAAACCCAGACACACCTGTGTTCCCTG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGAGAAAGGTCAACTGAAGAAACCCAGACACACCTGTGTTCCCTG  747

seq1  GTGTATTCCACTGTAAAGAAAAATTAACACCAATGCTCCTTTTTTTAAAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATTCCACTGTAAAGAAAAATTAACACCAATGCTCCTTTTTTTAAAA  797

seq1  TACCTTTTAAAAATTATCTTTAATCTTTTTTTTTTTCAGTCTAGTCGTTA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTTTAAAAATTATCTTTAATCTTTTTTTTTTTCAGTCTAGTCGTTA  847

seq1  TCCCTTCTCAGTCCTCCCTCTGACAGTTCCTTATCCCGTACCTCCCCCTC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTCTCAGTCCTCCCTCTGACAGTTCCTTATCCCGTACCTCCCCCTC  897

seq1  CTCTCCGTCTCCAAGAGGATGTCCCCTCCACCCAGCCCCGTCAGGCCTCC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCGTCTCCAAGAGGATGTCCCCTCCACCCAGCCCCGTCAGGCCTCC  947

seq1  CTGCTCACTCCTCTCTTAAATGTTGCTTGAGCACTAATGAGCTACGATTT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCACTCCTCTCTTAAATGTTGCTTGAGCACTAATGAGCTACGATTT  997

seq1  TGCATTTCAGAAATCAGAACTTTACACATAAAAGGAAAGATGGAATTC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTCAGAAATCAGAACTTTACACATAAAAGGAAAGATGGAATTC  1045

seq1: chr8_25460081_25460676
seq2: B6Ng01-222G04.g_654_1233

seq1  ATTAAATGACATCATATACCAAAGGGACCTAAACAATATCTATAGAATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATGACATCATATACCAAAGGGACCTAAACAATATCTATAGAATGT  50

seq1  TCCACAAAGTATATACATTCTACTCAGCAGCCCAGTGGACACTTATCTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAAAGTATATACATTCTACTCAGCAGCCCAGTGGACACTTATCTAA  100

seq1  CATGAACCACATCCTGTGACACAAAACAAACCTTACCAAATTCAGAAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAACCACATCCTGTGACACAAAACAAACCTTACCAAATTCAGAAAAG  150

seq1  TGGAAATAACTCTATATGTGCTCTATGACCATAATACAATAAAAGCAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAATAACTCTATATGTGCTCTATGACCATAATACAATAAAAGCAAGG  200

seq1  ACTACAGCCATCAAATCTCTACTAATTATACCAACTGATGGAGATTAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACAGCCATCAAATCTCTACTAATTATACCAACTGATGGAGATTAAAC  250

seq1  AACTCACTATTCAATGATGAACAGGTCAGAAAAGAAATAACAGAAGGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AACTCACTATTCAATGATGAACAGGTCAGAAAAGAAATAACAGAA-GAAT  299

seq1  AAAAACACTCCCAGAACTAAACAACAATTAAAAAAAAACCAAAATACCAC  350
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -AAAACACTCCCAGAACTAAACAACAATTAAAAAAAAACCAAAATACCAC  348

seq1  AAAACTACTGGGGCACGTTGAAAGCAGTCCTGTGAGGGAAACTCATAGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTACTGGGGCACGTTGAAAGCAGTCCTGTGAGGGAAACTCATAGCC  398

seq1  CTGGATACCTACATTAAAATAAAAATCGAGAGGCCCATTTTCCTGCATGA  450
      ||||||||||||||||||   |||||||||||||||| ||||||||||| 
seq2  CTGGATACCTACATTAAA--TAAAATCGAGAGGCCCA-TTTCCTGCATG-  444

seq1  ATGTCCTTTGAATATTGGAAGGTAATGAGTTACTTAAAATTACTTCATC-  499
      |||||||||||| || ||||||| ||||||||||   || ||| ||||| 
seq2  ATGTCCTTTGAA-ATGGGAAGGT-ATGAGTTACT---AAATAC-TCATCT  488

seq1  TGTGTATCCTCTCTTCTCATGGATAAAACTCACAAC-AAGCTCTATAATT  548
      ||||||||||||||||||||| || ||||||||||| ||||| | | || 
seq2  TGTGTATCCTCTCTTCTCATGAAT-AAACTCACAACAAAGCT-TCTTAT-  535

seq1  GGTAGA--GGTCATCTGTGAAACCTACATCCTTGCCAGCACTGTGATCGG  596
       |||||  | ||||||||||||||||| ||||   ||| |||||||||||
seq2  -GTAGAAGGTTCATCTGTGAAACCTAC-TCCT--GCAG-ACTGTGATCGG  580