BAC Information

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BAC

Clone NameB6Ng01-222G21
Chromosome8 (Build37)
Map Location 128,167,385 - 128,319,058
singlet/doubletdoublet
Overlap gene4933403G14Rik, 2310079N02Rik, E330039K12Rik
Upstream gene2310022B05Rik, Ttc13, Arv1, 2310031A18Rik, LOC668444, Trim67, 2810004N23Rik, Gnpat, Exoc8, Gm505, Egln1, Tsnax, Disc1, Sipa1l2
Downstream geneBC021891, Kcnk1, Slc35f3, LOC668434, 1810063B05Rik, EG619653, Irf2bp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-222G21.bB6Ng01-222G21.g
ACCGA037447GA037448
length9991,055
definitionB6Ng01-222G21.b B6Ng01-222G21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,167,385 - 128,168,377)(128,318,011 - 128,319,058)
sequence
gaattcccgctactgtgaggaatcaaggttggttaatgtgtgatctgtct
gtgctgtgtgactgagacgggagagcagggctctgtgacatgaggttgtg
ggggcgccctttctctgggtaagcgagcaggtcctcctgctgtctggcac
tagtcaggttgcctctgatcctcactggatggggagggggagctgggcat
gttcttgtctctctgcttagggcctggtttcctatagggactggaatctc
acatgattgacatcctacgatggggaaaccctgggaaggccttggagata
cggtgacagagggttgatctggtagacacagaacacaggcacacgagctt
tcagagcagaactgtacctccttatgaagctgctgagcaacaaacccatc
agtgttgttggttttgagtctaggaagcagaagactttggggagagagag
agagactggaaccagggagcaggatgcttatcgccgagccaggcacttgc
tgggcctgacctttccagccttccttggtgctgtcccatgaaggatccac
tgatggtgtattgtaggtgattgccgttacctgcgcgccttaggccaatc
aatcactcacagtttacacatggagacgcgagcagagatctgcactgatg
tgtgcatgcaggattacttttttctcttcatggttacatcatcgaaagaa
aatttggttttggcttggaagaggacacgtatgtttaatacatatattct
cccaggatggcagacaggaacaaagtgcagccagaacagggagaagccag
ggcaagacaccagttctcagatgcacctcatggtctgcttcttccagtgg
agtgtaaattccatcggtgagcttgtcgtgatgtggggaagcgccccaca
tttcgccgtttcgagatggctgctgacagcttgtgttctaagtggtaaac
atcaatcggcgcattgtgccaaggggtagttttccaccccatggtgctc
gaattccaggtctgagtctggttgagcaaagtggtgagcttccctaccat
tctgctggcccaggagaaagctctcgtgcagcccccgggagcaggctcga
cactcaaggcaaggcaatgagcaactgtgtggttatatttcagaagaagg
gggcctttgaggagaggtcgcaagtcaggtttcttgtgtgtctgtgcact
atccttcacgctatggtgtgtggttttcttggaataggttcctttttgct
gagtggcaaaagtggccgagaagtgccgagtcgtgaaacaggccgtgcga
gggactgtgcacagacataagcatgcccacctgttctccagctgtctgga
gctgctgactcttcaagggcaccaggttactgggcctcgggagagactcc
aggtgatggatgtctgagagaggtacaaggctgggacagctgcaggggag
gtctgttctgaggcaaggcagccagagagaggagaccacagcttttccct
tgttgcagcccttgttgcagccttggatatgatgctgctcttctgccaaa
aaagtaggcagaagtggggagggaaagaggaatattctaggtgtgtggta
tgtacaggtgtgtggaggttcgaggacaacttcaaggtttgctcttcaag
agtcatgcatcttggttctttgaaacagggactctcattgacctggaact
caccaactagggctaccctggctggccagcaaaccccagagatacacttg
tctttgtctttttggtgctgggattagaagtgtgtattaccgggccctgc
attttttgaaatatacctttctggagattaaactcaggtccctaggtttt
caaggctatcatcttaccaactgagctatgccccagcctgagatacacag
cttttaaagctaccactgtctaaaacccttcttgttgccttgttgtaata
ttacacaggacaagaagcttattggaacatgtcccaagtaccttggtcag
ttaggcttccttaaggctagacttcttagcccatactaattagagtccca
ccagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_128167385_128168377
seq2: B6Ng01-222G21.b_43_1041

seq1  GAATTCCCGCTACTGTGAGGAATCAAGGTTGGTTAATGTGTGATCTGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCGCTACTGTGAGGAATCAAGGTTGGTTAATGTGTGATCTGTCT  50

seq1  GTGCTGTGTGACTGAGACGGGAGAGCAGGGCTCTGTGACATGAGGTTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGTGTGACTGAGACGGGAGAGCAGGGCTCTGTGACATGAGGTTGTG  100

seq1  GGGGCGCCCTTTCTCTGGGTAAGCGAGCAGGTCCTCCTGCTGTCTGGCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCGCCCTTTCTCTGGGTAAGCGAGCAGGTCCTCCTGCTGTCTGGCAC  150

seq1  TAGTCAGGTTGCCTCTGATCCTCACTGGATGGGGAGGGGGAGCTGGGCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCAGGTTGCCTCTGATCCTCACTGGATGGGGAGGGGGAGCTGGGCAT  200

seq1  GTTCTTGTCTCTCTGCTTAGGGCCTGGTTTCCTATAGGGACTGGAATCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTGTCTCTCTGCTTAGGGCCTGGTTTCCTATAGGGACTGGAATCTC  250

seq1  ACATGATTGACATCCTACGATGGGGAAACCCTGGGAAGGCCTTGGAGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGATTGACATCCTACGATGGGGAAACCCTGGGAAGGCCTTGGAGATA  300

seq1  CGGTGACAGAGGGTTGATCTGGTAGACACAGAACACAGGCACACGAGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGACAGAGGGTTGATCTGGTAGACACAGAACACAGGCACACGAGCTT  350

seq1  TCAGAGCAGAACTGTACCTCCTTATGAAGCTGCTGAGCAACAAACCCATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGCAGAACTGTACCTCCTTATGAAGCTGCTGAGCAACAAACCCATC  400

seq1  AGTGTTGTTGGTTTTGAGTCTAGGAAGCAGAAGACTTTGGGGAGAGAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTGTTGGTTTTGAGTCTAGGAAGCAGAAGACTTTGGGGAGAGAGAG  450

seq1  AGAGACTGGAACCAGGGAGCAGGATGCTTATCGCCGAGCCAGGCACTTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACTGGAACCAGGGAGCAGGATGCTTATCGCCGAGCCAGGCACTTGC  500

seq1  TGGGCCTGACCTTTCCAGCCTTCCTTGGTGCTGTCCCATGAAGGATCCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCTGACCTTTCCAGCCTTCCTTGGTGCTGTCCCATGAAGGATCCAC  550

seq1  TGATGGTGTATTGTAGGTGATTGCCGTTACCTGCGCGCCTTAGGCCAATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGTGTATTGTAGGTGATTGCCGTTACCTGCGCGCCTTAGGCCAATC  600

seq1  AATCACTCACAGTTTACACATGGAGACGCGAGCAGAGATCTGCACTGATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACTCACAGTTTACACATGGAGACGCGAGCAGAGATCTGCACTGATG  650

seq1  TGTGCATGCAGGATTACTTTTTTCTCTTCATGGTTACATCATCGAAAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATGCAGGATTACTTTTTTCTCTTCATGGTTACATCATCGAAAGAA  700

seq1  AATTTGGTTTTGGCTTGGAAGAGGACACGTATG-TTAATACATATATTCT  749
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AATTTGGTTTTGGCTTGGAAGAGGACACGTATGTTTAATACATATATTCT  750

seq1  CCCAGGATGGCAGACAGGAACAAAGTGCAGCCAGAACAGGGAGAAGCCAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGATGGCAGACAGGAACAAAGTGCAGCCAGAACAGGGAGAAGCCAG  800

seq1  GGCAAGACACCAGTTCTCAGATGCACCTCATGGTCTGCTTCTACCAGTGG  849
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GGCAAGACACCAGTTCTCAGATGCACCTCATGGTCTGCTTCTTCCAGTGG  850

seq1  AGTGTTAATTCCATCGGTGAGC-TGTCGTGATGTGGGAAGCCGCCCCCAC  898
      ||||| |||||||||||||||| |||||||||||||| |  || ||||||
seq2  AGTGTAAATTCCATCGGTGAGCTTGTCGTGATGTGGGGAAGCG-CCCCAC  899

seq1  A-TTCGCCGTTACAAGATGGC-GCTGACAGC-TGTGTTCTAAGTGGTAAA  945
      | ||||||||| | ||||||| ||||||||| ||||||||||||||||||
seq2  ATTTCGCCGTTTCGAGATGGCTGCTGACAGCTTGTGTTCTAAGTGGTAAA  949

seq1  CAAATAATCTGCGCA-TGTGCCAA-GGGTAGTTTTCCACCCCAT-GTGCT  992
      | |  |||| ||||| |||||||| ||||||||||||||||||| |||||
seq2  C-ATCAATCGGCGCATTGTGCCAAGGGGTAGTTTTCCACCCCATGGTGCT  998

seq1  C  993
      |
seq2  C  999

seq1: chr8_128318011_128319058
seq2: B6Ng01-222G21.g_66_1120 (reverse)

seq1  CCTGGTGGGGACTCTAATTAGTAT-GGCTAAGAGTTCTAGGCCTTAGGGA  49
      |||||| ||||||||||||||||| ||||||||  |||| |||||| |||
seq2  CCTGGT-GGGACTCTAATTAGTATGGGCTAAGAAGTCTA-GCCTTAAGGA  48

seq1  GCCCTAACTGACC-AGGTACTTGGGACATG-TCCAATAAGCCTCTTGTCC  97
        ||||||||||| |||||||||||||||| |||||||||| ||||||||
seq2  AGCCTAACTGACCAAGGTACTTGGGACATGTTCCAATAAGCTTCTTGTCC  98

seq1  TGTGTATATTTACAAC-AGGCAACAAG-AGGGTTTTAGACAGT-GTAGCT  144
      ||||||   ||||||| |||||||||| ||||||||||||||| ||||||
seq2  TGTGTAATATTACAACAAGGCAACAAGAAGGGTTTTAGACAGTGGTAGCT  148

seq1  TTAAAAGCTGTGTATCTCAGGCTGGGGCATAGCTCAGTTGGTAAGATGAT  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGCTGTGTATCTCAGGCTGGGGCATAGCTCAGTTGGTAAGATGAT  198

seq1  AGCCTTGAAAACCTAGGGACCTGAGTTTAATCTCCAG-AAGGTATATTTC  243
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGCCTTGAAAACCTAGGGACCTGAGTTTAATCTCCAGAAAGGTATATTTC  248

seq1  -AAAAATGCA-GGCCCGGTAATACACACTTCTAATCCCAGCACCAAAAAG  291
       ||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATGCAGGGCCCGGTAATACACACTTCTAATCCCAGCACCAAAAAG  298

seq1  ACAAAGACAAGTGTATCTCTGGGGTTTGCTGGCCAGCCAGGGTAGCCCTA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGACAAGTGTATCTCTGGGGTTTGCTGGCCAGCCAGGGTAGCCCTA  348

seq1  GTTGGTGAGTTCCAGGTCAATGAGAGTCCCTGTTTCAAAGAACCAAGATG  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTGAGTTCCAGGTCAATGAGAGTCCCTGTTTCAAAGAACCAAGATG  398

seq1  CATGACTCTTGAAGAGCAAACCTTGAAGTTGTCCTCGAACCTCCACACAC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACTCTTGAAGAGCAAACCTTGAAGTTGTCCTCGAACCTCCACACAC  448

seq1  CTGTACATACCACACACCTAGAATATTCCTCTTTCCCTCCCCACTTCTGC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTACATACCACACACCTAGAATATTCCTCTTTCCCTCCCCACTTCTGC  498

seq1  CTACTTTTTTGGCAGAAGAGCAGCATCATATCCAAGGCTGCAACAAGGGC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTTTTTGGCAGAAGAGCAGCATCATATCCAAGGCTGCAACAAGGGC  548

seq1  TGCAACAAGGGAAAAGCTGTGGTCTCCTCTCTCTGGCTGCCTTGCCTCAG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAACAAGGGAAAAGCTGTGGTCTCCTCTCTCTGGCTGCCTTGCCTCAG  598

seq1  AACAGACCTCCCCTGCAGCTGTCCCAGCCTTGTACCTCTCTCAGACATCC  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGACCTCCCCTGCAGCTGTCCCAGCCTTGTACCTCTCTCAGACATCC  648

seq1  ATCACCTGGAGTCTCTCCCGAGGCCCAGTAACCTGGTGCCCTTGAAGAGT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCTGGAGTCTCTCCCGAGGCCCAGTAACCTGGTGCCCTTGAAGAGT  698

seq1  CAGCAGCTCCAGACAGCTGGAGAACAGGTGGGCATGCTTATGTCTGTGCA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGCTCCAGACAGCTGGAGAACAGGTGGGCATGCTTATGTCTGTGCA  748

seq1  CAGTCCCTCGCACGGCCTGTTTCACGACTCGGCACTTCTCGGCCACTTTT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCCTCGCACGGCCTGTTTCACGACTCGGCACTTCTCGGCCACTTTT  798

seq1  GCCACTCAGCAAAAAGGAACCTATTCCAAGAAAACCACACACCATAGCGT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTCAGCAAAAAGGAACCTATTCCAAGAAAACCACACACCATAGCGT  848

seq1  GAAGGATAGTGCACAGACACACAAGAAACCTGACTTGCGACCTCTCCTCA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGATAGTGCACAGACACACAAGAAACCTGACTTGCGACCTCTCCTCA  898

seq1  AAGGCCCCCTTCTTCTGAAATATAACCACACAGTTGCTCATTGCCTTGCC  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCCCCTTCTTCTGAAATATAACCACACAGTTGCTCATTGCCTTGCC  948

seq1  TTGAGTGTCGAGCCTGCTCCCGGGGGCTGCACGAGAGCTTTCTCCTGGGC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTGTCGAGCCTGCTCCCGGGGGCTGCACGAGAGCTTTCTCCTGGGC  998

seq1  CAGCAGAATGGTAGGGAAGCTCACCACTTTGCTCAACCAGACTCAGACCT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGAATGGTAGGGAAGCTCACCACTTTGCTCAACCAGACTCAGACCT  1048

seq1  GGAATTC  1048
      |||||||
seq2  GGAATTC  1055