BAC Information

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BAC

Clone NameB6Ng01-222H05
Chromosome8 (Build37)
Map Location 62,779,284 - 62,780,486
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneAadat, Mfap3l, LOC100040679, 2700029M09Rik, Clcn3, B230317F23Rik, Nek1, Sh3rf1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-222H05.bB6Ng01-222H05.g
ACCGA037461GA037462
length1,2111,194
definitionB6Ng01-222H05.b B6Ng01-222H05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttatacagtgagaagatatcttacaatgtacatgtttggaatgc
atacaaagtagaaaactaaagacctgtgtagaaaatttttctgaattgat
tctggatggaaaaataagatttttgtcaattagcagaaatagaaccagta
gaaattgtagtcccttttactaagggagaaactgcctcattatgggcaga
aaatgaatgttgccaaagggtttacaataatttgcaggagaaatttacaa
aaattaccccaaaagcaagcaagttcagtttcaaaaaatacactagttgt
attatcactcatgtagtaaaagagacaccaatttcaatagcccctacatt
ccatactaaagtacataaatctggaatggcagatcataagtcaaaaataa
aaaataaaaatagagactcagagcccttataactcagttcaaaaatcaga
gctgtatgtcattcttatggcattattagattttctacaatctcttgata
tggatactgactctaaataaagagaaataattattttgcatatagaaact
tctggatttattcagggtaattccaaattaactgatttataaataaattc
attttattcatctacagcaagtaatcagaaatagcaatcatttactgtat
atagcgtatatcagatccaatatgggtgtaccaggccccctcttaaaaag
taataattaaattgatcagatatgagtagaaaatgcactagatgcttcag
aattttatttttaaattcccaacatgttagcagcaaatgtttaaagaaag
atttttctatcaattgttaacaagccaaaaaaattataagaaactgttct
ttatattgccaaactccattatctgcagaggataacctagaagatactca
aagaaatgaaacttgacaaataatgtttcatttttcaattttggaaaatt
aaaataagtacactgtaacatagtcacatattcagaatttcaatgggata
tttaccctacattctgaaaaaaaatgttgtgtattacatattgtattaga
agttatggttttattgatactgtacaattagactgagatgctctagcata
tgttcttctagtacaattttggtaggcagatgtggtgcagacgcttatcc
agactgagcaaagtcagtgaatttctggagtccagagccagcccttggtc
ctcactagaag
gaattctctgcttctttggattttgaggtaaaatatttggatgagtaacg
agaataatagtgaaactagaaaaaatgtttatcgcaacattcttctttaa
actgtcttcataatttatacaagttaatgagctacggaaaaatttaatat
tctcgtaaaattcggatatatttaggacctactaacagaacatctgtcat
gcgttatatattgctgcttttgttgctgtgacagaatagccaacagaaac
aacttaatgaaggaaggatttcctttggctcatgtctccagagtgtgtca
ttgagggaaagtcatgaggactggaaatgggcagggcgaaatgtgaggtg
gttgtttcccttgtgtaaacagtcaggatgcaggtagattgggctggaac
cagggatgaactataagcattagacccttgcccacagtgacccacttcct
ctagctatgtacagccacctctgaaacattctataacctctcaagatagc
actttcagcctgggagcaagctttcaaacacatgcatttgtgggggtagt
caacactcaaagcacaacacgtaagattctgtgccttcctctgaagtgtt
taggtagatggggctaattggtatgaaatcaaatagtagatgaagttact
tttattgcttctatttgctcctttattccatttcaagtaccacctctcta
tttcttttcaggtattcagtatcttgctaattgtaatccaatctcccctg
gagagaaaatggcaattattttcagattcatgaatatcaattgatgcaat
tgcctcattattttttgacacaacacctactctgatagatcaggggaaaa
aaaaacagatacacttagtatctaggcctcatcaaggcactttgcagatc
agaattacctcttgtatatctgaggataagacatataatataaaacagat
tcctcttagttaactgataatcaaatgtctatgtccatagagtctctgta
aatgaaatattgtcttcagaagaaaaaaaatctatcacataaggatagct
ctgccctgcctcattttatatgctgtaaataatacgtatttatacaatcc
tctaattcaaagaagtatatgccatgcagctggaaggtcaatgattctac
tgaaggagcccaataatagtgtcagtccagaaagtttccgcctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_62779284_62780486
seq2: B6Ng01-222H05.g_64_1257 (reverse)

seq1  CAGGCGGAA--CTTCTGAGACTGACAACTATTTTAATGGCTCC-TCAGTA  47
      |||||||||   ||||| ||||||| |||||| |   |||||| ||||||
seq2  CAGGCGGAAACTTTCTG-GACTGAC-ACTATTAT-TGGGCTCCTTCAGTA  47

seq1  GAATCATTCACCTTCCAAGCTGCAT-GCATATCACTTTCTTTTAAAATTA  96
      |||||||| ||||||| |||||||| |||||| || ||||||   |||||
seq2  GAATCATTGACCTTCC-AGCTGCATGGCATAT-AC-TTCTTT--GAATTA  92

seq1  GA-GATTGTATAAATACGTATTAATTTAACAGCATATAAAATGAGCAAGG  145
      || ||||||||||||||||||||  || |||||||||||||||||  |||
seq2  GAGGATTGTATAAATACGTATTA--TTTACAGCATATAAAATGAGGCAGG  140

seq1  GCAGAGCTATCCTTATGTGAATAGATTTTTTTTTCTTCTGAAGACAATAT  195
      ||||||||||||||||||| ||||| ||||||||||||||||||||||||
seq2  GCAGAGCTATCCTTATGTG-ATAGA-TTTTTTTTCTTCTGAAGACAATAT  188

seq1  TTCATTTACAGAGACTCTATGGACATAGACATTTGATTATCAGTTAACCT  245
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TTCATTTACAGAGACTCTATGGACATAGACATTTGATTATCAGTTAA-CT  237

seq1  AAGAGGAATCTGTTTTATATTTATATGTCTTATCCTCAGATATACAAGAG  295
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AAGAGGAATCTGTTTTATA-TTATATGTCTTATCCTCAGATATACAAGAG  286

seq1  GTAATTCTGATCTGCAAAGTGCCTTGATGAGGCCTAGATACTAAGTGTAT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTCTGATCTGCAAAGTGCCTTGATGAGGCCTAGATACTAAGTGTAT  336

seq1  CTGTTTTTTTTTCCCCTGATCTATCAGAGTAGGTGTTGTGTCAAAAAATA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTTTTTTCCCCTGATCTATCAGAGTAGGTGTTGTGTCAAAAAATA  386

seq1  ATGAGGCAATTGCATCAATTGATATTCATGAATCTGAAAATAATTGCCAT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGCAATTGCATCAATTGATATTCATGAATCTGAAAATAATTGCCAT  436

seq1  TTTCTCTCCAGGGGAGATTGGATTACAATTAGCAAGATACTGAATACCTG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTCCAGGGGAGATTGGATTACAATTAGCAAGATACTGAATACCTG  486

seq1  AAAAGAAATAGAGAGGTGGTACTTGAAATGGAATAAAGGAGCAAATAGAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAATAGAGAGGTGGTACTTGAAATGGAATAAAGGAGCAAATAGAA  536

seq1  GCAATAAAAGTAACTTCATCTACTATTTGATTTCATACCAATTAGCCCCA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATAAAAGTAACTTCATCTACTATTTGATTTCATACCAATTAGCCCCA  586

seq1  TCTACCTAAACACTTCAGAGGAAGGCACAGAATCTTACGTGTTGTGCTTT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCTAAACACTTCAGAGGAAGGCACAGAATCTTACGTGTTGTGCTTT  636

seq1  GAGTGTTGACTACCCCCACAAATGCATGTGTTTGAAAGCTTGCTCCCAGG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTTGACTACCCCCACAAATGCATGTGTTTGAAAGCTTGCTCCCAGG  686

seq1  CTGAAAGTGCTATCTTGAGAGGTTATAGAATGTTTCAGAGGTGGCTGTAC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAGTGCTATCTTGAGAGGTTATAGAATGTTTCAGAGGTGGCTGTAC  736

seq1  ATAGCTAGAGGAAGTGGGTCACTGTGGGCAAGGGTCTAATGCTTATAGTT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTAGAGGAAGTGGGTCACTGTGGGCAAGGGTCTAATGCTTATAGTT  786

seq1  CATCCCTGGTTCCAGCCCAATCTACCTGCATCCTGACTGTTTACACAAGG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCTGGTTCCAGCCCAATCTACCTGCATCCTGACTGTTTACACAAGG  836

seq1  GAAACAACCACCTCACATTTCGCCCTGCCCATTTCCAGTCCTCATGACTT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAACCACCTCACATTTCGCCCTGCCCATTTCCAGTCCTCATGACTT  886

seq1  TCCCTCAATGACACACTCTGGAGACATGAGCCAAAGGAAATCCTTCCTTC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCAATGACACACTCTGGAGACATGAGCCAAAGGAAATCCTTCCTTC  936

seq1  ATTAAGTTGTTTCTGTTGGCTATTCTGTCACAGCAACAAAAGCAGCAATA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGTTGTTTCTGTTGGCTATTCTGTCACAGCAACAAAAGCAGCAATA  986

seq1  TATAACGCATGACAGATGTTCTGTTAGTAGGTCCTAAATATATCCGAATT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACGCATGACAGATGTTCTGTTAGTAGGTCCTAAATATATCCGAATT  1036

seq1  TTACGAGAATATTAAATTTTTCCGTAGCTCATTAACTTGTATAAATTATG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACGAGAATATTAAATTTTTCCGTAGCTCATTAACTTGTATAAATTATG  1086

seq1  AAGACAGTTTAAAGAAGAATGTTGCGATAAACATTTTTTCTAGTTTCACT  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGTTTAAAGAAGAATGTTGCGATAAACATTTTTTCTAGTTTCACT  1136

seq1  ATTATTCTCGTTACTCATCCAAATATTTTACCTCAAAATCCAAAGAAGCA  1195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTCTCGTTACTCATCCAAATATTTTACCTCAAAATCCAAAGAAGCA  1186

seq1  GAGAATTC  1203
      ||||||||
seq2  GAGAATTC  1194