BAC Information

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BAC

Clone NameB6Ng01-222L20
Chromosome8 (Build37)
Map Location 49,332,077 - 49,494,283
singlet/doubletdoublet
Overlap geneOdz3
Upstream geneStox2, 4930448N21Rik, D030016E14Rik, Rwdd4a, LOC384819, LOC667422, Ing2, LOC546058, Cdkn2aip, LOC100039801, Cldn22, Wwc2, LOC100040113, Dctd
Downstream gene2900073C17Rik, LOC100039866, 4930555F03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-222L20.bB6Ng01-222L20.g
ACCGA037674GA037675
length1,154108
definitionB6Ng01-222L20.b B6Ng01-222L20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(49,493,115 - 49,494,283)(49,332,077 - 49,332,184)
sequence
gaattctgtcctctttgcatgaagctagcatgtgtgtgtgcatttacgta
ttttgcatggatgagtagtttatcgcggcttaccgttggtacatggatag
tctattcagaaccttttcctagagttcatgtttctttgattttaccatgg
tgtttttcccagacttccatcctctggtttctttaccacccagtagttac
cctgccatgtgtatctgcctgtcctttccgctctcctgtggtttgctttt
gcctcagtttatctttctcttctaaattcaagcctgagaaagagcctgct
ttctgctaacaccattctgagaacccgttcttcttagcccatagaacaaa
attcttggacgtggctttaaccagctaagcctcatcgattccatttgata
acctgattctgacgcaaccctcgttgtgattttgtatcatcgcagctcag
atgagaaacacttagaatgctagtactcaaaaacctcctgtcgcagccac
atcccgagtaatgcattcttgccactttctggtcgtggtgtgtggagcga
gcttgggctttgaggcagatctgggtgaacatccagtgaatgacatcacc
ttacctcatgtggtttatcttttttttttttttctccatcaactaggatt
gatcatgcttcacaaagactttatcaagtttcactgaaatgtcccgtgca
gtgctcatgagggcagtgtgttgtacatagcaagttcttggccagtcaag
actgcagagtaagcccctgtgtccacagcaaacaaaatttgtgtgtgtca
tgtgtctgtgtgtatatctgtgtgtgtgtgtgcacacacgcacgtgcgca
catttgtgctttagtgacatgttagtgacagtgcttgccaacatggtatg
gtcagtaaatgtgaccccttgtctcatttggtagatttatctcactttga
aggtttctaactctaggtaaactgtcgtacgcaaatgactggccagtatg
tggccagtatgtggcttaagcaattctcacccaccttcaaagattttgaa
gatcgtgtgctatgagcactcataaagcatagtactaaaaggtgaggcat
tgcagccttccccttcccttcaatctgatgcctgaaggtaggcttgctaa
ctaa
aactcagaatgaccccaaacaatttgcctaaagagaggtgctggcttact
gggctgcgcatactcttctgaagtgtaacggaggaggaggaggaggagga
ggaggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_49493115_49494283
seq2: B6Ng01-222L20.b_43_1196 (reverse)

seq1  TTAGTTAGCAGGGCCCTAACACCTCTCAGGCATCAGGATAGGAGGGGAGG  50
      |||||||||| |  |||   |||| |||||||||| ||| | |||| |||
seq2  TTAGTTAGCAAG--CCT---ACCT-TCAGGCATCA-GATTGAAGGGAAGG  43

seq1  GGGAGGGGCTGCAATGCCTTCACCTTTTAGTAACTATGCTTTATGAGTGC  100
      || |  |||||||||||| |||||||||||| ||||||||||||||||||
seq2  GGAA--GGCTGCAATGCC-TCACCTTTTAGT-ACTATGCTTTATGAGTGC  89

seq1  TTCATTAAGCACACGATTCTTCAAAATCTTTGGAGGTGGGTTGAGAATTG  150
       ||||  ||||||||| ||||||||||||||| ||||||| |||||||||
seq2  -TCAT--AGCACACGA-TCTTCAAAATCTTTGAAGGTGGG-TGAGAATTG  134

seq1  CTTTTAGCCACATACTGGCCACATACTGGCCAGTCATTTGCGTACGACAG  200
      | || |||||||||||||||||||||||||||||||||||||||||||||
seq2  C-TTAAGCCACATACTGGCCACATACTGGCCAGTCATTTGCGTACGACAG  183

seq1  TTTACCTAGAGTTAGAAACCTTCAAAGTGAGATAAATCTA-CAAATGAGA  249
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTTACCTAGAGTTAGAAACCTTCAAAGTGAGATAAATCTACCAAATGAGA  233

seq1  CAAGGGGTCACATTTACTGACCATACCATGTTGGCAAGCACTGTCACTAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGGTCACATTTACTGACCATACCATGTTGGCAAGCACTGTCACTAA  283

seq1  CATGTCACT-AAGCACAAATGTGCGCACGTGCGTGTGTGCACACACACAC  348
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCACTAAAGCACAAATGTGCGCACGTGCGTGTGTGCACACACACAC  333

seq1  ACAGATATACACACAGACACATGACACACACAAATTTTGTTTGCTGTGGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATATACACACAGACACATGACACACACAAATTTTGTTTGCTGTGGA  383

seq1  CACAGGGGCTTACTCTGCAGTCTTGACTGGCCAAGAACTTGCTATGTACA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGGGCTTACTCTGCAGTCTTGACTGGCCAAGAACTTGCTATGTACA  433

seq1  ACACACTGCCCTCATGAGCACTGCACGGGACATTTCAGTGAAACTTGATA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACTGCCCTCATGAGCACTGCACGGGACATTTCAGTGAAACTTGATA  483

seq1  AAGTCTTTGTGAAGCATGATCAATCCTAGTTGATGGAGAAAAAAAAAAAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTTTGTGAAGCATGATCAATCCTAGTTGATGGAGAAAAAAAAAAAA  533

seq1  AAGATAAACCACATGAGGTAAGGTGATGTCATTCACTGGATGTTCACCCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAAACCACATGAGGTAAGGTGATGTCATTCACTGGATGTTCACCCA  583

seq1  GATCTGCCTCAAAGCCCAAGCTCGCTCCACACACCACGACCAGAAAGTGG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGCCTCAAAGCCCAAGCTCGCTCCACACACCACGACCAGAAAGTGG  633

seq1  CAAGAATGCATTACTCGGGATGTGGCTGCGACAGGAGGTTTTTGAGTACT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAATGCATTACTCGGGATGTGGCTGCGACAGGAGGTTTTTGAGTACT  683

seq1  AGCATTCTAAGTGTTTCTCATCTGAGCTGCGATGATACAAAATCACAACG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTCTAAGTGTTTCTCATCTGAGCTGCGATGATACAAAATCACAACG  733

seq1  AGGGTTGCGTCAGAATCAGGTTATCAAATGGAATCGATGAGGCTTAGCTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTGCGTCAGAATCAGGTTATCAAATGGAATCGATGAGGCTTAGCTG  783

seq1  GTTAAAGCCACGTCCAAGAATTTTGTTCTATGGGCTAAGAAGAACGGGTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAGCCACGTCCAAGAATTTTGTTCTATGGGCTAAGAAGAACGGGTT  833

seq1  CTCAGAATGGTGTTAGCAGAAAGCAGGCTCTTTCTCAGGCTTGAATTTAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAATGGTGTTAGCAGAAAGCAGGCTCTTTCTCAGGCTTGAATTTAG  883

seq1  AAGAGAAAGATAAACTGAGGCAAAAGCAAACCACAGGAGAGCGGAAAGGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAAGATAAACTGAGGCAAAAGCAAACCACAGGAGAGCGGAAAGGA  933

seq1  CAGGCAGATACACATGGCAGGGTAACTACTGGGTGGTAAAGAAACCAGAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAGATACACATGGCAGGGTAACTACTGGGTGGTAAAGAAACCAGAG  983

seq1  GATGGAAGTCTGGGAAAAACACCATGGTAAAATCAAAGAAACATGAACTC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAAGTCTGGGAAAAACACCATGGTAAAATCAAAGAAACATGAACTC  1033

seq1  TAGGAAAAGGTTCTGAATAGACTATCCATGTACCAACGGTAAGCCGCGAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAAAGGTTCTGAATAGACTATCCATGTACCAACGGTAAGCCGCGAT  1083

seq1  AAACTACTCATCCATGCAAAATACGTAAATGCACACACACATGCTAGCTT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTACTCATCCATGCAAAATACGTAAATGCACACACACATGCTAGCTT  1133

seq1  CATGCAAAGAGGACAGAATTC  1169
      |||||||||||||||||||||
seq2  CATGCAAAGAGGACAGAATTC  1154

seq1: chr8_49332077_49332184
seq2: B6Ng01-222L20.g_72_179

seq1  AACTCAGAATGACCCCAAACAATTTGCCTAAAGAGAGGTGCTGGCTTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAGAATGACCCCAAACAATTTGCCTAAAGAGAGGTGCTGGCTTACT  50

seq1  GGGCTGCGCATACTCTTCTGAAGTGTAACGGAGGAGGAGGAGGAGGAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGCGCATACTCTTCTGAAGTGTAACGGAGGAGGAGGAGGAGGAGGA  100

seq1  GGAGGAGG  108
      ||||||||
seq2  GGAGGAGG  108