BAC Information

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BAC

Clone NameB6Ng01-222N22
Chromosome8 (Build37)4 (Build37)
Map Location 49,493,493 - 49,494,28310,598,954 - 10,599,521
singlet/doubletsingletsinglet
Overlap geneOdz3
Upstream gene4930448N21Rik, D030016E14Rik, Rwdd4a, LOC384819, LOC667422, Ing2, LOC546058, Cdkn2aip, LOC100039801, Cldn22, Wwc2, LOC100040113, Dctd
Downstream gene2900073C17Rik, LOC100039866, 4930555F03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-222N22.bB6Ng01-222N22.g
ACCGA037768GA037769
length792681
definitionB6Ng01-222N22.b B6Ng01-222N22.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(49,493,493 - 49,494,283)(10,598,954 - 10,599,521)
sequence
gaattctgtcctctttgcatgaagctagcatgtgtgtgtgcatttacgta
ttttgcatggatgagtagtttatcgcggcttaccgttggtacatggatag
tctattcagaaccttttcctagagttcatgtttctttgattttaccatgg
tgtttttcccagacttccatcctctggtttctttaccacccagtagttac
cctgccatgtgtatctgcctgtcctttccgctctcctgtggtttgctttt
gcctcagtttatctttctcttctaaattcaagcctgagaaagagcctgct
ttctgctaacaccattctgagaacccgttcttcttagcccatagaacaaa
attcttggacgtggctttaaccagctaagcctcatcgattccatttgata
acctgattctgacgcaaccctcgttgtgattttgtatcatcgcagctcag
atgagaaacacttagaatgctagtactcaaaaacctcctgtcgcagccac
atcccgagtaatgcattcttgccactttctggtcgtggtgtgtggagcga
gcttgggctttgaggcagatctgggtgaacatccagtgaatgacatcacc
ttacctcatgtggtttatctttttttttttttttctccatcaactaggat
tgatcatgcttcacaaagactttatcaagtttcactgaaaatgtcccgtg
cagtgctcatgagggcagtgtgttgtacatagcaagttcttggccagtca
agactgcagagtaagcccctgtgttccacagcaacaaatttg
gaattcaactcagaatgaccccaaacaatttgcctaaagagaggtgctgg
cttactgggctgcgcatactcttctgaagtgtaacggaggaggaggagga
ggaggaggaggattgagtactgtcaccatgagataaagccattgagcaag
aatgtggttatacttaaggatcataatttccagcatggagatatatgcag
acgtaaaaatagccaacttaaatgagaatccagaatttgaattaggagta
ccaacatgactcatagtgtgttttaccctgaaagaacaaacaaaaacaaa
caaacaaagcaaacaaacaaaaaaccccagaaccttcctggcagctttgt
ctgctagcaagactaagaaactccagaaatagatctctgttacatataat
tttttctaaaagtgtttacaaatacttgtaaaaatggtaactgcaagtct
agggtaggaattagaaaaaaaaaaaatgagcctgggatatctcaccaagt
aaaagaccaatggacacaaccagataccccaggctgagtgagttggagag
ctgtgagatccttcggtcttctctaaggaggcaagaatgtagaggtgagg
ggcgtgggcacatcagcagacagcatgcttttgttggttcattcctagtc
ttcagcagtgcaagtgtgcttgctcttctgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_49493493_49494283
seq2: B6Ng01-222N22.b_43_834 (reverse)

seq1  CAAATTTTGTTTGCTGTGG-ACACAGGGGCTTACTCTGCAGTCTTGACTG  49
      |||||||   ||||||||| ||||||||||||||||||||||||||||||
seq2  CAAATTT--GTTGCTGTGGAACACAGGGGCTTACTCTGCAGTCTTGACTG  48

seq1  GCCAAGAACTTGCTATGTACAACACACTGCCCTCATGAGCACTGCACGGG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGAACTTGCTATGTACAACACACTGCCCTCATGAGCACTGCACGGG  98

seq1  ACA-TTTCAGTGAAACTTGATAAAGTCTTTGTGAAGCATGATCAATCCTA  148
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTCAGTGAAACTTGATAAAGTCTTTGTGAAGCATGATCAATCCTA  148

seq1  GTTGATGGAG-AAAAAAAAAAAAAAGATAAACCACATGAGGTAAGGTGAT  197
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GTTGATGGAGAAAAAAAAAAAAAAAGATAAACCACATGAGGTAAGGTGAT  198

seq1  GTCATTCACTGGATGTTCACCCAGATCTGCCTCAAAGCCCAAGCTCGCTC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTCACTGGATGTTCACCCAGATCTGCCTCAAAGCCCAAGCTCGCTC  248

seq1  CACACACCACGACCAGAAAGTGGCAAGAATGCATTACTCGGGATGTGGCT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACCACGACCAGAAAGTGGCAAGAATGCATTACTCGGGATGTGGCT  298

seq1  GCGACAGGAGGTTTTTGAGTACTAGCATTCTAAGTGTTTCTCATCTGAGC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGACAGGAGGTTTTTGAGTACTAGCATTCTAAGTGTTTCTCATCTGAGC  348

seq1  TGCGATGATACAAAATCACAACGAGGGTTGCGTCAGAATCAGGTTATCAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGATGATACAAAATCACAACGAGGGTTGCGTCAGAATCAGGTTATCAA  398

seq1  ATGGAATCGATGAGGCTTAGCTGGTTAAAGCCACGTCCAAGAATTTTGTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAATCGATGAGGCTTAGCTGGTTAAAGCCACGTCCAAGAATTTTGTT  448

seq1  CTATGGGCTAAGAAGAACGGGTTCTCAGAATGGTGTTAGCAGAAAGCAGG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGGCTAAGAAGAACGGGTTCTCAGAATGGTGTTAGCAGAAAGCAGG  498

seq1  CTCTTTCTCAGGCTTGAATTTAGAAGAGAAAGATAAACTGAGGCAAAAGC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCTCAGGCTTGAATTTAGAAGAGAAAGATAAACTGAGGCAAAAGC  548

seq1  AAACCACAGGAGAGCGGAAAGGACAGGCAGATACACATGGCAGGGTAACT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCACAGGAGAGCGGAAAGGACAGGCAGATACACATGGCAGGGTAACT  598

seq1  ACTGGGTGGTAAAGAAACCAGAGGATGGAAGTCTGGGAAAAACACCATGG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGTGGTAAAGAAACCAGAGGATGGAAGTCTGGGAAAAACACCATGG  648

seq1  TAAAATCAAAGAAACATGAACTCTAGGAAAAGGTTCTGAATAGACTATCC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCAAAGAAACATGAACTCTAGGAAAAGGTTCTGAATAGACTATCC  698

seq1  ATGTACCAACGGTAAGCCGCGATAAACTACTCATCCATGCAAAATACGTA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACCAACGGTAAGCCGCGATAAACTACTCATCCATGCAAAATACGTA  748

seq1  AATGCACACACACATGCTAGCTTCATGCAAAGAGGACAGAATTC  791
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCACACACACATGCTAGCTTCATGCAAAGAGGACAGAATTC  792

seq1: chr4_10598954_10599521
seq2: B6Ng01-222N22.g_180_748

seq1  TTGAGTACTGTCACCATGAGATAAAGCCATTGAGCAAGAATGTGGTTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTACTGTCACCATGAGATAAAGCCATTGAGCAAGAATGTGGTTATA  50

seq1  CTTAAGGATCATAATTTCCAGCATGGAGATATATGCAGACGTAAAAATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGGATCATAATTTCCAGCATGGAGATATATGCAGACGTAAAAATAG  100

seq1  CCAACTTAAATGAGAATCCAGAATTTGAATTAGGAGTACCAACATGACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTTAAATGAGAATCCAGAATTTGAATTAGGAGTACCAACATGACTC  150

seq1  ATAGTGTGTTTTACCCTGAAAGAACAAACAAAAACAAACAAACAAAGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGTGTTTTACCCTGAAAGAACAAACAAAAACAAACAAACAAAGCAA  200

seq1  ACAAACAAAAAACCCCAGAACCTTCCTGGCAGCTTTGTCTGCTAGCAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAAAAACCCCAGAACCTTCCTGGCAGCTTTGTCTGCTAGCAAGA  250

seq1  CTAAGAAACTCCAGAAATAGATCTCTGTTACATATAATTTTTTCTAAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAAACTCCAGAAATAGATCTCTGTTACATATAATTTTTTCTAAAAG  300

seq1  TGTTTACAAATACTTGTAAAAATGGTAACTGCAAGTCTAGGGTAGGAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACAAATACTTGTAAAAATGGTAACTGCAAGTCTAGGGTAGGAATT  350

seq1  AGAAAAAAAAAAAATGAGCCTGGGATATCTCACCAAGTAAAAGACCAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAAAAAAAATGAGCCTGGGATATCTCACCAAGTAAAAGACCAATG  400

seq1  GACACAACCAGATACCCCAGGCTGAGTGAGTTGGAGAGCTGTGAGATCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAACCAGATACCCCAGGCTGAGTGAGTTGGAGAGCTGTGAGATCCT  450

seq1  TCGGTCTTCTCTAAGGAGGCAAGAATGTAGAGG-GAGGGGCGTGGGCACA  499
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TCGGTCTTCTCTAAGGAGGCAAGAATGTAGAGGTGAGGGGCGTGGGCACA  500

seq1  TCAGCAGACAGCATGCTTTTGTTGGTTCATTCCTAGTCTTCAGCAGTGCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAGACAGCATGCTTTTGTTGGTTCATTCCTAGTCTTCAGCAGTGCA  550

seq1  AGTGTGCTTGCTCTTCTGC  568
      |||||||||||||||||||
seq2  AGTGTGCTTGCTCTTCTGC  569