BAC Information

Click to search

BAC

Clone NameB6Ng01-223J20
Chromosome8 (Build37)
Map Location 85,533,377 - 85,534,407
singlet/doubletsinglet
Overlap geneRnf150
Upstream geneInpp4b, LOC671182, Il15, EG666564, LOC675800, EG666289, Zfp330
Downstream geneLOC100039688, Tbc1d9, Ucp1, Elmod2, 4933434I20Rik, Clgn, Scoc, LOC546077, LOC675854, Olfr370, Ndufb7, Gpsn2, Dnajb1, Gipc1, Ptger1, Pkn1, Ddx39, Cd97, EG384857, Lphn1, Asf1b, Prkaca, Samd1, 1700067K01Rik, 2210011C24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-223J20.bB6Ng01-223J20.g
ACCGA038309GA038310
length1,034816
definitionB6Ng01-223J20.b B6Ng01-223J20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctacataagttatggtaaatgaataaagcctcctttctcatctgt
catcgtggtaattattaaggtgaagtcatatacatccatgccagctcttt
ctttcccttctccctttcttcatccagtttttctctaacacatgaacaca
aggctccattgatgtgaacctgggcctgtgcgcacaaagtgagggacaga
cacgcagtggcttgctcagccagttggctacagccaacgtctaacttttg
tgacttggatttgatcccaattcatcactaaggcattttccaggaaacac
gggttttgctatgtcatacacacatcaagatgtgcataatgctacatttt
gggatgggcttgtgaattagactagagcttgtggttatgattcttagcca
cagaacatatcttcctggagcactgtattgatcttcattgtcttctgtcc
agagaatgaataatgttctctgcttcttttaacctataaccccccctact
ctttttcccagtggttacttctttcagcccacttatctgtgttcaaagac
acaaaatttcaagaagaatgtatattccttaggtggatcagatgtccaca
tttgtataaggcaaaacaatatgtttttcttgccagtgtccctataaaat
tctttcctatctttaatttatcgccacttggtgggggcattactgtgttt
ccttttaatctagcagtctcttccacagctggggacaacttcagaagcgt
cctggcaataagcgagccttgtgacaagcttgtagtacatgagcaacccc
tttggaacaacaaataccgtatagcagaaacaggtaggatataccatata
tggggatggaaagtggagtgatcttgtggaatacaggaattcccagtggg
agaatcaggaaacagcatgaatatgggtgtcacaatgaacaaattttctg
caaatatgataaagctaataccacattggattttaaaaaggttttatata
ataataataacggagacgaggaagatgaaaaaga
gaattctcacagacaccaaatggtgctttgtaaaacttgcccctcaagtt
atccctgactggttaataaagatgcctacagtctgggctgggcaaaaaag
aggggtcagagcaaaggctcctgaacttgaggtttgaggttgggatagaa
ggaagagaaaggaagaaggaaggaagttgccctggggaaggtggattgtg
agcacatggccatgaggtttggcctgatggactaggagtggcccaggcag
aacatggcaagctatatctcgagcatcaccatacagaaatagaaaaaaat
agaatagagggttgatatctgcccagcttattataaatctaaaggttcct
gtgtcctttatcacagaaaacaatcatttgaaggggggtagaaaccccta
attgatttttaaagacaacaaggggtatagcaaatcccagcataatttta
accacaacaaaccctagttgcagttcctctgagtgtctcagcttttattg
tcagccaaaatatactttggaagagagaccctcgactaaagaattgccca
gattgggttggcctttggtcatgtatataagagattgtctctcttgatgg
ttgatgtgggagggccttgcccactgtgggtggggacatccctaggcagg
gcggtctgggctgtgtatgaaaaacttttaggacttcctgagcattgaaa
cagggaagcccagataggaagcagctgtcctttcatgcttgagttcctga
gtgagttctgcactgaactttcctcactgttgaacagttaactgggaagc
cgtgagatgaaaataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_85533377_85534407
seq2: B6Ng01-223J20.b_46_1079

seq1  GAATTCTACATAAGTTATGGTAAATGAATAAAGCCTCCTTTCTCATCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACATAAGTTATGGTAAATGAATAAAGCCTCCTTTCTCATCTGT  50

seq1  CATCGTGGTAATTATTAAGGTGAAGTCATATACATCCATGCCAGCTCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCGTGGTAATTATTAAGGTGAAGTCATATACATCCATGCCAGCTCTTT  100

seq1  CTTTCCCTTCTCCCTTTCTTCATCCAGTTTTTCTCTAACACATGAACACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCCTTCTCCCTTTCTTCATCCAGTTTTTCTCTAACACATGAACACA  150

seq1  AGGCTCCATTGATGTGAACCTGGGCCTGTGCGCACAAAGTGAGGGACAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCCATTGATGTGAACCTGGGCCTGTGCGCACAAAGTGAGGGACAGA  200

seq1  CACGCAGTGGCTTGCTCAGCCAGTTGGCTACAGCCAACGTCTAACTTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCAGTGGCTTGCTCAGCCAGTTGGCTACAGCCAACGTCTAACTTTTG  250

seq1  TGACTTGGATTTGATCCCAATTCATCACTAAGGCATTTTCCAGGAAACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTGGATTTGATCCCAATTCATCACTAAGGCATTTTCCAGGAAACAC  300

seq1  GGGTTTTGCTATGTCATACACACATCAAGATGTGCATAATGCTACATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTTGCTATGTCATACACACATCAAGATGTGCATAATGCTACATTTT  350

seq1  GGGATGGGCTTGTGAATTAGACTAGAGCTTGTGGTTATGATTCTTAGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGGGCTTGTGAATTAGACTAGAGCTTGTGGTTATGATTCTTAGCCA  400

seq1  CAGAACATATCTTCCTGGAGCACTGTATTGATCTTCATTGTCTTCTGTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACATATCTTCCTGGAGCACTGTATTGATCTTCATTGTCTTCTGTCC  450

seq1  AGAGAATGAATAATGTTCTCTGCTTCTTTTAACCTATAACCCCCCCTACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATGAATAATGTTCTCTGCTTCTTTTAACCTATAACCCCCCCTACT  500

seq1  CTTTTTCCCAGTGGTTACTTCTTTCAGCCCACTTATCTGTGTTCAAAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCCCAGTGGTTACTTCTTTCAGCCCACTTATCTGTGTTCAAAGAC  550

seq1  ACAAAATTTCAAGAAGAATGTATATTCCTTAGGTGGATCAGATGTCCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATTTCAAGAAGAATGTATATTCCTTAGGTGGATCAGATGTCCACA  600

seq1  TTTGTATAAGGCAAAACAATATGTTTTTCTTGCCAGTGTCCCTATAAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATAAGGCAAAACAATATGTTTTTCTTGCCAGTGTCCCTATAAAAT  650

seq1  TCTTTCCTATCTTTAATTTATCGCCACTTGGTGGGGGCATTACTGTGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCTATCTTTAATTTATCGCCACTTGGTGGGGGCATTACTGTGTTT  700

seq1  CCTTTTAATCTAGCAGTCTCTTCCACAGCTGGGGACAACTTCAGAAGCGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTAATCTAGCAGTCTCTTCCACAGCTGGGGACAACTTCAGAAGCGT  750

seq1  CCTGGCAATAAGCGAGCCTTGTGACAAGCTTGTAGTACATGAGCAACCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCAATAAGCGAGCCTTGTGACAAGCTTGTAGTACATGAGCAACCCC  800

seq1  TTTGGAACAACAAATACCGTATAGCAGAAACA-GTAGGATATACCATATA  849
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TTTGGAACAACAAATACCGTATAGCAGAAACAGGTAGGATATACCATATA  850

seq1  T-GGGATGGAAAGTGGAGTGATCTTGTGGAAAACAGGAATT-CCAGT-GG  896
      | ||||||||||||||||||||||||||||| ||||||||| ||||| ||
seq2  TGGGGATGGAAAGTGGAGTGATCTTGTGGAATACAGGAATTCCCAGTGGG  900

seq1  AGAATCAGGAAACAGCATG-ATATGGGTGTCCACAATG-ACAAA-TTTCT  943
      ||||||||||||||||||| |||||||||| ||||||| ||||| |||||
seq2  AGAATCAGGAAACAGCATGAATATGGGTGT-CACAATGAACAAATTTTCT  949

seq1  GCAAATATGATAAAGCTAATACCACAATGGATTTAAAAAAGGTTTTATAA  993
      |||||||||||||||||||||||||| ||||||| ||||||||||||| |
seq2  GCAAATATGATAAAGCTAATACCACATTGGATTTTAAAAAGGTTTTAT-A  998

seq1  TAATAATAATAAGGAAGAGGAGGAGGAAGAGAAAAAGA  1031
      |||||||||||| | ||| ||||| ||   ||||||||
seq2  TAATAATAATAACGGAGACGAGGAAGA--TGAAAAAGA  1034