BAC Information

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BAC

Clone NameB6Ng01-225J08
Chromosome8 (Build37)
Map Location 48,731,224 - 48,949,620
singlet/doubletdoublet
Overlap geneLOC667422, Ing2, LOC546058, Cdkn2aip, LOC100039801, Cldn22, Wwc2
Upstream geneIrf2, Enpp6, Stox2, 4930448N21Rik, D030016E14Rik, Rwdd4a, LOC384819
Downstream geneLOC100040113, Dctd, Odz3, 2900073C17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-225J08.bB6Ng01-225J08.g
ACCGA039741GA039742
length239860
definitionB6Ng01-225J08.b B6Ng01-225J08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(48,949,382 - 48,949,620)(48,731,224 - 48,732,075)
sequence
cagacacttgaagttggagtcagacattcttgcctacatcagtagctcca
taggagtcagttccacgcgaatggaaggcagagtagccataagtatccct
gctaaccgactgtccacctgctcctggttcctaggcctggtgaaatggaa
gatgttccctacagtgaagaggatgtcaccattgtggagactgcccaggt
gcagataggactcaggtaacgcaggagggggaggggagg
gaattcttggacctcaacagcaattatagaaaaattaggagtcactttat
gggcataaaggggctctactaaatggcactaaagacctctgtaaagactc
tctctgcacaaagactaatttcttcagttcatgttatagtgagcaaaaca
gttgagacttgccgagaaagggcacgagaggaaactacgatcgctaggga
gagtgccctttggccttggagatttcagatttgcattatttaattgagag
ggtctcagcagggctgacccgggttcaacacttgagattaatgcactaga
acattctaaaaaggtcaggagtgatttaaagtgaataaaggttttttttt
gggggggggatattaaaatctaaaaaaaaaaaaaaaaaaaatggtgagag
gtgaaaagcccaagactgttccaattaggcaggctctaaagagatgaagt
gaacgaccaacctacggataccgctgatgttgatgtccttgtctgtgcct
caaggagacactttgcgtttgtttgcactgattcagctatggaagaatca
agcctggtttgatttttgttcttcccttaaatcaactgtttttttttttt
cttcttctttacttcagataaaaacaataactctaattagttttccatac
atgttaactcccaagaaaggaattagtattcagaggcaaattcaacttca
atgattagcaagcaggatcccatagttcacctgtcagctgcagaacgtct
gcgcgagttttgctaagccagtgggacacagacgcttcgttgggatgttt
gagctgagagagactgcagagttcaccatccctcaggtgaattcttgctt
gacgtgaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_48949382_48949620
seq2: B6Ng01-225J08.b_52_290 (reverse)

seq1  CCTCCCCTCCCCCTCCTGCGTTACCTGAGTCCTATCTGCACCTGGGCAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCTCCCCCTCCTGCGTTACCTGAGTCCTATCTGCACCTGGGCAGT  50

seq1  CTCCACAATGGTGACATCCTCTTCACTGTAGGGAACATCTTCCATTTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACAATGGTGACATCCTCTTCACTGTAGGGAACATCTTCCATTTCAC  100

seq1  CAGGCCTAGGAACCAGGAGCAGGTGGACAGTCGGTTAGCAGGGATACTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCTAGGAACCAGGAGCAGGTGGACAGTCGGTTAGCAGGGATACTTA  150

seq1  TGGCTACTCTGCCTTCCATTCGCGTGGAACTGACTCCTATGGAGCTACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTACTCTGCCTTCCATTCGCGTGGAACTGACTCCTATGGAGCTACTG  200

seq1  ATGTAGGCAAGAATGTCTGACTCCAACTTCAAGTGTCTG  239
      |||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGGCAAGAATGTCTGACTCCAACTTCAAGTGTCTG  239

seq1: chr8_48731224_48732075
seq2: B6Ng01-225J08.g_65_923

seq1  GAATTCTTGGACCTCAACAGCAATTATAGAAAAATTAGGAGTCACTTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGACCTCAACAGCAATTATAGAAAAATTAGGAGTCACTTTAT  50

seq1  GGGCATAAAGGGGCTCTACTAAATGGCACTAAAGACCTCTGTAAAGACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATAAAGGGGCTCTACTAAATGGCACTAAAGACCTCTGTAAAGACTC  100

seq1  TCTCTGCACAAAGACTAATTTCTTCAGTTCATGTTATAGTGAGCAAAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGCACAAAGACTAATTTCTTCAGTTCATGTTATAGTGAGCAAAACA  150

seq1  GTTGAGACTTGCCGAGAAAGGGCACGAGAGGAAACTACGATCGCTAGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGACTTGCCGAGAAAGGGCACGAGAGGAAACTACGATCGCTAGGGA  200

seq1  GAGTGCCCTTTGGCCTTGGAGATTTCAGATTTGCATTATTTAATTGAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCCCTTTGGCCTTGGAGATTTCAGATTTGCATTATTTAATTGAGAG  250

seq1  GGTCTCAGCAGGGCTGACCCGGGTTCAACACTTGAGATTAATGCACTAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCAGCAGGGCTGACCCGGGTTCAACACTTGAGATTAATGCACTAGA  300

seq1  ACATTCTAAAAAGGTCAGGAGTGATTTAAAGTGAATAAAGGTTTTTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCTAAAAAGGTCAGGAGTGATTTAAAGTGAATAAAGGTTTTTTTTT  350

seq1  GGGGGGGGGATATTAAAATCTAAAAAAAAAAAAAAAAAAAATGGTGAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGGGGATATTAAAATCTAAAAAAAAAAAAAAAAAAAATGGTGAGAG  400

seq1  GTGAAAAGCCCAAGACTGTTCCAATTAGGCAGGCTCTAAAGAGATGAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAAGCCCAAGACTGTTCCAATTAGGCAGGCTCTAAAGAGATGAAGT  450

seq1  GAACGACCAACCTACGGATACCGCTGATGTTGATGTCCTTGTCTGTGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACGACCAACCTACGGATACCGCTGATGTTGATGTCCTTGTCTGTGCCT  500

seq1  CAAGGAGACACTTTGCGTTTGTTTGCACTGATTCAGCTATGGAAGAATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAGACACTTTGCGTTTGTTTGCACTGATTCAGCTATGGAAGAATCA  550

seq1  AGCCTGGTTTGATTTTTGTTCTTCCCTTAAATCAACTGTTTTTTTTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGGTTTGATTTTTGTTCTTCCCTTAAATCAACTGTTTTTTTTTTTT  600

seq1  CTTCTTCTTTACTTCAGAT-AAAACAATAACTCTAATTAGTTTTCCATAC  649
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTTCTTCTTTACTTCAGATAAAAACAATAACTCTAATTAGTTTTCCATAC  650

seq1  ATGTTAACTCCCAAGAAAGGAATTAGTATTCAGAGGCAAATTCAAC-TCA  698
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATGTTAACTCCCAAGAAAGGAATTAGTATTCAGAGGCAAATTCAACTTCA  700

seq1  AGGATTAGCAAGCAGGAGTCCATAGTTCACCTGTCAGCTGCAGAACGTCT  748
      | |||||||||||||||  |||||||||||||||||||||||||||||||
seq2  ATGATTAGCAAGCAGGATCCCATAGTTCACCTGTCAGCTGCAGAACGTCT  750

seq1  GCGCGAGTCTTGCTAAGCCAGT-GGACACAGACGC-TCG-TGGGATGTTT  795
      |||||||| ||||||||||||| |||||||||||| ||| ||||||||||
seq2  GCGCGAGTTTTGCTAAGCCAGTGGGACACAGACGCTTCGTTGGGATGTTT  800

seq1  GAGCTGAGAGAGACTGCAGAGTTCACCAT-CCTCAGGTG-ATTCCTGCAT  843
      ||||||||||||||||||||||||||||| ||||||||| |||| ||| |
seq2  GAGCTGAGAGAGACTGCAGAGTTCACCATCCCTCAGGTGAATTCTTGCTT  850

seq1  GACGTGAAA  852
      |||||||||
seq2  GACGTGAAA  859