BAC Information

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BAC

Clone NameB6Ng01-225K23
Chromosome8 (Build37)
Map Location 116,172,838 - 116,362,946
singlet/doubletdoublet
Overlap gene4930481F22Rik, Adamts18
Upstream geneCntnap4, LOC100042061, Mon1b
Downstream geneNudt7, AI427515, Clec3a, Wwox
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-225K23.bB6Ng01-225K23.g
ACCGA039817GA039818
length1,1721,065
definitionB6Ng01-225K23.b B6Ng01-225K23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(116,361,775 - 116,362,946)(116,172,838 - 116,173,894)
sequence
gaattctatcaagtaagctatgccccctggccattccatatctttaaaca
cacttaacatgcattttgaatctctaaatgatgaaatcggtactggcctg
accaatatatctgatttaaaattgtacttctgactgaaatataattgcag
aagaacaattgctaggcctaagataatatgccttttctttgtacctgacc
tctgatggcaatgtgtttattctacttggagataatagacttttgcttaa
tgaactcagtctagactaggctctgttctttacatgtctagtaagtgaaa
acacacacacacacacacacacacacacacacacacacactgacctcgtg
tgtctgttcagctagctctacagtgcacggacgggtctgctgacttttga
taatctctgcagagtctagctgaccacaagggaaggctgctttgccattt
gttgctgaatcttctgtctggtgttggctcatggtctccactcccaactg
tattccaggctccagcagagtggttacaacaaccaaggctgcctcaagga
tctcttccagcctggatcccctgtgcgccatccaactttgtcgcttgctt
cctttggcttctctttcctttgtctgctccatggacagctgccctgatgt
cacatgtgtcttttcttcaggggtggcctttgcagcctgggactgctaca
gtgaccattctcaggagaaccttggtccctgcaaggagcttttgaagcgc
ttggatatgaataagcggctgaaagctttgatgcctccttttcaaaagta
ttttataactccgaaagctgtcaccgagttgtcttattgctagtcactgc
ctgccaagttatctttagaaagccgatttccatttcataaaagggctgaa
gttaaatgcccctagcccggtgtttctgctgtttgcagggccttgctggc
tagcagggggttgtgaattacatctacccacttgggaacttcatgggtca
cttgagaggatcatgtgaaatttacagattagaactgggttgtatttgca
tgttttctaaatacagcctgaccaaatcaaagaatgtttttcttaagctt
attattccattcatcaggttaaaaagacctttattttcctgcctttctcc
tctgtgtctcctaagactgatt

gaattctagagaagttgacttctgccctatatatttgcccacataactca
atgcaccaccacattcacgtacgtacagatatgtgcaataacacacatag
acacatgttaagtaaatatgtgttaagagcatgataataattcattagaa
ttcacaagttacagctatagttattttaaagaactcaatatgaaatctgt
cttccctgtttcatttattagaatctcatcatgacttttcaatagcagta
gagtctagaagacactctctcctctcaccctgagtttgactaagaggagt
tcaggaatgtcttttgtccccttgtagcaaagctaactcatccaggatac
atcatgatacttaaaaacagagagctggttccccaggcgccctgctgtgg
caggagacatggccctcagcccagtcttggtcgatcacagctaaggagtg
tctactgagttctagctgctttctgacctgggtctgcatctttcccggct
ttgcccatatgcctgctgggtcctgtaattctggttttcatccctgcagg
gcaggccgcatctctgaatacgatggaagacttgctggagacagtgaaaa
agctacagaaaggtcaggtgtcctgtgcccaagtctcagattttgagtca
ggcagacagaattagaacctaaaagcctcaactcacaactttagaaactt
atcctgttattcctattcggttctgttctttgccaagagagagagagaga
gagagagagagagagagagagagagagagagagagagagagagagagaga
aagaaagaaaaagaaagagagagagagagagagagagagagagagaaaga
aatattaagaaacccggctaaaacttcaaaatctttaagagggacagaaa
aatcttccttcacttataggggcacaggagacataagtgtggcgcggcaa
aacccacacactattagtcatttctctttccatcaatccattaaatctat
catattatctggtttaattcaatttcgtgaatccacaggcaagcagtatt
attttctgggttttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_116361775_116362946
seq2: B6Ng01-225K23.b_46_1217 (reverse)

seq1  AATCATGTCTTAGGAGAACACAGAGGAGAAAAGCCAAGAAAATAAAAGGG  50
      ||||| |||||||||| ||||||||||| |||| || |||||||||  ||
seq2  AATCA-GTCTTAGGAG-ACACAGAGGAG-AAAGGCAGGAAAATAAA--GG  45

seq1  TCTTTTTACCCTTGATGAATTGAATAAT-AGCCTAAGAAAAACA-TCTTT  98
      |||||||| || |||||||| ||||||| ||| ||||||||||| |||||
seq2  TCTTTTTAACC-TGATGAATGGAATAATAAGCTTAAGAAAAACATTCTTT  94

seq1  GATTTGGGTCAGCCTGTATTTAAGAAACATGCAAATACAACCCAG-TCTA  147
      ||||| |||||| |||||||||  ||||||||||||||||||||| ||||
seq2  GATTT-GGTCAGGCTGTATTTAGAAAACATGCAAATACAACCCAGTTCTA  143

seq1  ATCTGT-AATTTCACATGATCCTCTCAAGTGA-CCATGAAGTT-CCAAGT  194
      |||||| ||||||||||||||||||||||||| |||||||||| ||||||
seq2  ATCTGTAAATTTCACATGATCCTCTCAAGTGACCCATGAAGTTCCCAAGT  193

seq1  GGGTAGATGTAATTCAACAACCCCTGCTAGCCAGCAAGGCCCTGCAAAAC  244
      ||||||||||||||||  | ||||||||||||||||||||||||| ||||
seq2  GGGTAGATGTAATTCACAACCCCCTGCTAGCCAGCAAGGCCCTGC-AAAC  242

seq1  AGCAGAAACACC-GGCTAGGGGCATTTAACTTCAGCCCTTTTATG-AATG  292
      |||||||||||| |||||||||||||||||||||||||||||||| ||||
seq2  AGCAGAAACACCGGGCTAGGGGCATTTAACTTCAGCCCTTTTATGAAATG  292

seq1  GAAATCGGCTTTCTAAAGATAACTTGGCAGGCAGTGACTAGCAATAAGAC  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCGGCTTTCTAAAGATAACTTGGCAGGCAGTGACTAGCAATAAGAC  342

seq1  AACTCGGTGACAGCTTTCGGAGTTATAAAATACTTTTGAAAAGGAGGCAT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCGGTGACAGCTTTCGGAGTTATAAAATACTTTTGAAAAGGAGGCAT  392

seq1  CAAAGCTTTCAGCCGCTTATTCATATCCAAGCGCTTCAAAAGCTCCTTGC  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCTTTCAGCCGCTTATTCATATCCAAGCGCTTCAAAAGCTCCTTGC  442

seq1  AGGGACCAAGGTTCTCCTGAGAATGGTCACTGTAGCAGTCCCAGGCTGCA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACCAAGGTTCTCCTGAGAATGGTCACTGTAGCAGTCCCAGGCTGCA  492

seq1  AAGGCCACCCCTGAAGAAAAGACACATGTGACATCAGGGCAGCTGTCCAT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCACCCCTGAAGAAAAGACACATGTGACATCAGGGCAGCTGTCCAT  542

seq1  GGAGCAGACAAAGGAAAGAGAAGCCAAAGGAAGCAAGCGACAAAGTTGGA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAGACAAAGGAAAGAGAAGCCAAAGGAAGCAAGCGACAAAGTTGGA  592

seq1  TGGCGCACAGGGGATCCAGGCTGGAAGAGATCCTTGAGGCAGCCTTGGTT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCGCACAGGGGATCCAGGCTGGAAGAGATCCTTGAGGCAGCCTTGGTT  642

seq1  GTTGTAACCACTCTGCTGGAGCCTGGAATACAGTTGGGAGTGGAGACCAT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTAACCACTCTGCTGGAGCCTGGAATACAGTTGGGAGTGGAGACCAT  692

seq1  GAGCCAACACCAGACAGAAGATTCAGCAACAAATGGCAAAGCAGCCTTCC  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCAACACCAGACAGAAGATTCAGCAACAAATGGCAAAGCAGCCTTCC  742

seq1  CTTGTGGTCAGCTAGACTCTGCAGAGATTATCAAAAGTCAGCAGACCCGT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGGTCAGCTAGACTCTGCAGAGATTATCAAAAGTCAGCAGACCCGT  792

seq1  CCGTGCACTGTAGAGCTAGCTGAACAGACACACGAGGTCAGTGTGTGTGT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGCACTGTAGAGCTAGCTGAACAGACACACGAGGTCAGTGTGTGTGT  842

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCACTTACTAGACATGTA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCACTTACTAGACATGTA  892

seq1  AAGAACAGAGCCTAGTCTAGACTGAGTTCATTAAGCAAAAGTCTATTATC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACAGAGCCTAGTCTAGACTGAGTTCATTAAGCAAAAGTCTATTATC  942

seq1  TCCAAGTAGAATAAACACATTGCCATCAGAGGTCAGGTACAAAGAAAAGG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGTAGAATAAACACATTGCCATCAGAGGTCAGGTACAAAGAAAAGG  992

seq1  CATATTATCTTAGGCCTAGCAATTGTTCTTCTGCAATTATATTTCAGTCA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTATCTTAGGCCTAGCAATTGTTCTTCTGCAATTATATTTCAGTCA  1042

seq1  GAAGTACAATTTTAAATCAGATATATTGGTCAGGCCAGTACCGATTTCAT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTACAATTTTAAATCAGATATATTGGTCAGGCCAGTACCGATTTCAT  1092

seq1  CATTTAGAGATTCAAAATGCATGTTAAGTGTGTTTAAAGATATGGAATGG  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAGAGATTCAAAATGCATGTTAAGTGTGTTTAAAGATATGGAATGG  1142

seq1  CCAGGGGGCATAGCTTACTTGATAGAATTC  1172
      ||||||||||||||||||||||||||||||
seq2  CCAGGGGGCATAGCTTACTTGATAGAATTC  1172


seq1: chr8_116172838_116173894
seq2: B6Ng01-225K23.g_66_1130

seq1  GAATTCTAGAGAAGTTGACTTCTGCCCTATATATTTGCCCACATAACTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGAGAAGTTGACTTCTGCCCTATATATTTGCCCACATAACTCA  50

seq1  ATGCACCACCACATTCACGTACGTACAGATATGTGCAATAACACACATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACCACCACATTCACGTACGTACAGATATGTGCAATAACACACATAG  100

seq1  ACACATGTTAAGTAAATATGTGTTAAGAGCATGATAATAATTCATTAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATGTTAAGTAAATATGTGTTAAGAGCATGATAATAATTCATTAGAA  150

seq1  TTCACAAGTTACAGCTATAGTTATTTTAAAGAACTCAATATGAAATCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAAGTTACAGCTATAGTTATTTTAAAGAACTCAATATGAAATCTGT  200

seq1  CTTCCCTGTTTCATTTATTAGAATCTCATCATGACTTTTCAATAGCAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTGTTTCATTTATTAGAATCTCATCATGACTTTTCAATAGCAGTA  250

seq1  GAGTCTAGAAGACACTCTCTCCTCTCACCCTGAGTTTGACTAAGAGGAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTAGAAGACACTCTCTCCTCTCACCCTGAGTTTGACTAAGAGGAGT  300

seq1  TCAGGAATGTCTTTTGTCCCCTTGTAGCAAAGCTAACTCATCCAGGATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAATGTCTTTTGTCCCCTTGTAGCAAAGCTAACTCATCCAGGATAC  350

seq1  ATCATGATACTTAAAAACAGAGAGCTGGTTCCCCAGGCGCCCTGCTGTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGATACTTAAAAACAGAGAGCTGGTTCCCCAGGCGCCCTGCTGTGG  400

seq1  CAGGAGACATGGCCCTCAGCCCAGTCTTGGTCGATCACAGCTAAGGAGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGACATGGCCCTCAGCCCAGTCTTGGTCGATCACAGCTAAGGAGTG  450

seq1  TCTACTGAGTTCTAGCTGCTTTCTGACCTGGGTCTGCATCTTTCCCGGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTGAGTTCTAGCTGCTTTCTGACCTGGGTCTGCATCTTTCCCGGCT  500

seq1  TTGCCCATATGCCTGCTGGGTCCTGTAATTCTGGTTTTCATCCCTGCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCATATGCCTGCTGGGTCCTGTAATTCTGGTTTTCATCCCTGCAGG  550

seq1  GCAGGCCGCATCTCTGAATACGATGGAAGACTTGCTGGAGACAGTGAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCCGCATCTCTGAATACGATGGAAGACTTGCTGGAGACAGTGAAAA  600

seq1  AGCTACAGAAAGGTCAGGTGTCCTGTGCCCAAGTCTCAGATTTTGAGTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACAGAAAGGTCAGGTGTCCTGTGCCCAAGTCTCAGATTTTGAGTCA  650

seq1  GGCAGACAGAATTAGAACCTAAAAGCCTCAACTCACAACTTTAGAAACTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGACAGAATTAGAACCTAAAAGCCTCAACTCACAACTTTAGAAACTT  700

seq1  ATCCTGTTATTCCTATTCGGTTCTGTTCTTTGCCAAGAGAGAGAGAGAGA  750
      |||||||||||||||||||||||||||||||||||  |||||||||||||
seq2  ATCCTGTTATTCCTATTCGGTTCTGTTCTTTGCCA--AGAGAGAGAGAGA  748

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  798

seq1  GAAAGAAAGAAAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GAAAGAAAGAAAAAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG-AA  847

seq1  AGAAATATAAAGAAAACACAGCTAAAACTTCAAAATCTTTAAGA-GGACA  899
      |||||||| ||| |||| | |||||||||||||||||||||||| |||||
seq2  AGAAATATTAAG-AAACCCGGCTAAAACTTCAAAATCTTTAAGAGGGACA  896

seq1  G-AAAATCTTCCTCCACTTATAGGGGCACA-GAGACATAAGTGT-GCGCG  946
      | ||||||||||| |||||||||||||||| ||||||||||||| |||||
seq2  GAAAAATCTTCCTTCACTTATAGGGGCACAGGAGACATAAGTGTGGCGCG  946

seq1  --CAAACACACACACTATCAGTCCATTCATCTTTCCATCGATCCATT-AA  993
         |||| |||||||||| ||| ||||  |||||||||| ||||||| ||
seq2  GCAAAACCCACACACTATTAGT-CATTTCTCTTTCCATCAATCCATTAAA  995

seq1  TCTATCATA-TATCTG--TTTATTCAATTTCGTG-ATCCACAGGCAAGCA  1039
      ||||||||| ||||||  || ||||||||||||| |||||||||||||||
seq2  TCTATCATATTATCTGGTTTAATTCAATTTCGTGAATCCACAGGCAAGCA  1045

seq1  GTATTATTT--TTGGTTTTG  1057
      |||||||||  | |||||||
seq2  GTATTATTTTCTGGGTTTTG  1065


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