BAC Information

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BAC

Clone NameB6Ng01-226L15
Chromosome8 (Build37)
Map Location 27,717,566 - 27,873,163
singlet/doubletdoublet
Overlap genenone
Upstream geneWhsc1l1, Ppapdc1, Bag4, Lsm1, Star, Ash2l, Kcnu1, Hgsnat, 4930444A02Rik, Fnta, Hook3, 1700047A11Rik, Rnf170, Thap1
Downstream geneZfp703, Erlin2, Prosc, Gpr124, Brf2, Rab11fip1, Got1l1, Adrb3, Eif4ebp1, LOC732482, Tex24, Chrnb3, Chrna6, 4921537P18Rik, Gm1698
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-226L15.bB6Ng01-226L15.g
ACCGA040586GA040587
length1,134698
definitionB6Ng01-226L15.b B6Ng01-226L15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(27,717,566 - 27,718,699)(27,872,469 - 27,873,163)
sequence
gaattcaatgttcatattcctatcagcattccaccagagatcccactaga
gatcccaccagaattgcctgttaccttttgtttaaactgtctaaatttcc
tcttgcctgattctccaaagttttccaaggtcttcccacaaaccagtttg
aaagactgctaaccccttgcagtctcagggtagtgataccacttctctga
tatcaaccttttgtgttaaactttctgctcctgtgaaaagacaattaaac
aaacaatacaaggggttaattgttcttatggtggtgaatgttttagtcca
cagcatcaaggacagcagccaggatacagagaaagaatgttgggctaaag
taatgccatcttatcctatctccattttgtgcctgcttatacatttctca
gccctctatacccccatcagccacatctgccttgatagtacatatgagat
ttccatgactatgaccatggtccagatgtattaaagagataataacgctt
atgcaaactaaactaaaacagctgaagaaggtatagataaaattaattgc
catgttgtatatgaagtaactactatgttaggcctaaacaaatgttgcaa
gattactctgaccctcatctaacattgatttaatttgccttttaaaattc
tgtatccctgaacttcaataccaatagactttctgaggcattagcccact
cttggtcaccaggcaaaaaaaattaaaggactcttatactatttgttagc
atggaggagtgtatctttctcatgaggattatttcagatgtacccacatt
caaggtaggcattcctcttaattaattctatctagaaatgcctttacata
aatgtgttaggttctcctagatacttctcagtctaaccaagtcaacaatc
aggattacctattaaagaaatcaaggcaaataagagacctctcatctgct
agttgtaaatggaattgctcccaacacactttccataaagatatgagtgt
tcctgataccaacgatctcacagaacagcatttttcttctcctattcact
cagaggatagctgcagcttcagggaaaatccatttgttcagctagagccc
tttctggatataggtggggagtgtgaaaatgggg
gaattctctctcttgctttgaaaagacgaattttcaaattggaaaaaaaa
cagtcaggcaggatagacacaggcaggggcttgtttcttttgggtgtgaa
tagcagtgctaaagtgatgctcttcagtgtgttggcacaccgaagtgagc
tatcaagactctctgaatgacatcttagaggtttcgtcataaaatgataa
gataggaaatgaagaaagttacatgccacatgccctcctcccccgcccca
caggggcagatcctgccttaaataagcttgtaccttagaaaaacgcagat
tgtatttacaatatgtagggatatatgacttattttcctctctgagtcat
gtagaacaggtagaaatggccaggacaagctaattaaaaatagtgtctga
agatgaaggtgtgtgtcctggtgtgtgtgtgtgtgtgtgtgtgtgtgtgc
gatggaaagaggaacttcagctgagaaaatgcctctatctgaatgcctgt
aggcaagtatagggcattctcttgactgaaggttgatgtcagagaaccca
gttcactgtgtgtagtactcatttgggcaggttcctggagtgtctacaga
aacagagaaagccaggggaatggagagagtaagcagcattcctcaatggc
tgttgcttcagttcctacctccatattttgcggtggtttgtatatgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_27717566_27718699
seq2: B6Ng01-226L15.b_48_1181

seq1  GAATTCAATGTTCATATTCCTATCAGCATTCCACCAGAGATCCCACTAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGTTCATATTCCTATCAGCATTCCACCAGAGATCCCACTAGA  50

seq1  GATCCCACCAGAATTGCCTGTTACCTTTTGTTTAAACTGTCTAAATTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCCACCAGAATTGCCTGTTACCTTTTGTTTAAACTGTCTAAATTTCC  100

seq1  TCTTGCCTGATTCTCCAAAGTTTTCCAAGGTCTTCCCACAAACCAGTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCCTGATTCTCCAAAGTTTTCCAAGGTCTTCCCACAAACCAGTTTG  150

seq1  AAAGACTGCTAACCCCTTGCAGTCTCAGGGTAGTGATACCACTTCTCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACTGCTAACCCCTTGCAGTCTCAGGGTAGTGATACCACTTCTCTGA  200

seq1  TATCAACCTTTTGTGTTAAACTTTCTGCTCCTGTGAAAAGACAATTAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAACCTTTTGTGTTAAACTTTCTGCTCCTGTGAAAAGACAATTAAAC  250

seq1  AAACAATACAAGGGGTTAATTGTTCTTATGGTGGTGAATGTTTTAGTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATACAAGGGGTTAATTGTTCTTATGGTGGTGAATGTTTTAGTCCA  300

seq1  CAGCATCAAGGACAGCAGCCAGGATACAGAGAAAGAATGTTGGGCTAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATCAAGGACAGCAGCCAGGATACAGAGAAAGAATGTTGGGCTAAAG  350

seq1  TAATGCCATCTTATCCTATCTCCATTTTGTGCCTGCTTATACATTTCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCCATCTTATCCTATCTCCATTTTGTGCCTGCTTATACATTTCTCA  400

seq1  GCCCTCTATACCCCCATCAGCCACATCTGCCTTGATAGTACATATGAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCTATACCCCCATCAGCCACATCTGCCTTGATAGTACATATGAGAT  450

seq1  TTCCATGACTATGACCATGGTCCAGATGTATTAAAGAGATAATAACGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATGACTATGACCATGGTCCAGATGTATTAAAGAGATAATAACGCTT  500

seq1  ATGCAAACTAAACTAAAACAGCTGAAGAAGGTATAGATAAAATTAATTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAACTAAACTAAAACAGCTGAAGAAGGTATAGATAAAATTAATTGC  550

seq1  CATGTTGTATATGAAGTAACTACTATGTTAGGCCTAAACAAATGTTGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTGTATATGAAGTAACTACTATGTTAGGCCTAAACAAATGTTGCAA  600

seq1  GATTACTCTGACCCTCATCTAACATTGATTTAATTTGCCTTTTAAAATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTACTCTGACCCTCATCTAACATTGATTTAATTTGCCTTTTAAAATTC  650

seq1  TGTATCCCTGAACTTCAATACCAATAGACTTTCTGAGGCATTAGCCCACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCCCTGAACTTCAATACCAATAGACTTTCTGAGGCATTAGCCCACT  700

seq1  CTTGGTCACCAGGCAAAAAAAATTAAAGGACTCTTATACTATTTGTTAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTCACCAGGCAAAAAAAATTAAAGGACTCTTATACTATTTGTTAGC  750

seq1  ATGGAGGAGTGTATCTTTCTCATGAGGATTATTTCAGATGTACCCACATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGGAGTGTATCTTTCTCATGAGGATTATTTCAGATGTACCCACATT  800

seq1  CAAGGTAGGCATTCCTCTTAATTAATTCTATCTAGAAATGCCTTTACATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTAGGCATTCCTCTTAATTAATTCTATCTAGAAATGCCTTTACATA  850

seq1  AATGTGTTAGGTTCTCCTAGATACTTCTCAGTCTAACCAAGTCAACAATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTTAGGTTCTCCTAGATACTTCTCAGTCTAACCAAGTCAACAATC  900

seq1  AGGATTACCTATTAAAGAAATCAAGGCAAATAAGAGACCTCTCATCTGCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTACCTATTAAAGAAATCAAGGCAAATAAGAGACCTCTCATCTGCT  950

seq1  AGTTGTAAATGGAATTGCTCCCAACACACTTTCCATAAAGATATGAGTGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTAAATGGAATTGCTCCCAACACACTTTCCATAAAGATATGAGTGT  1000

seq1  TCCTGATACCAACGATCTCACAG-ACAGCATTTT--CTCTCCTATCACCT  1047
      ||||||||||||||||||||||| ||||||||||   ||||||||   ||
seq2  TCCTGATACCAACGATCTCACAGAACAGCATTTTTCTTCTCCTATTCACT  1050

seq1  CAGAAGATAGCTGGCAGCTTCAAGGGAAATCCATTTGTTCAGCTAGAGGC  1097
      |||| ||||||| ||||||||| || ||||||||||||||||||||| ||
seq2  CAGAGGATAGCT-GCAGCTTCAGGGAAAATCCATTTGTTCAGCTAGA-GC  1098

seq1  CCTTTCTGGATATA-GTGGGAAGTGTGAAAAAATGGGG  1134
      |||||||||||||| ||||| ||||||  |||||||||
seq2  CCTTTCTGGATATAGGTGGGGAGTGTG--AAAATGGGG  1134

seq1: chr8_27872469_27873163
seq2: B6Ng01-226L15.g_69_766 (reverse)

seq1  AGCATATACAAACCACCGC-AAATATGGAGGTAGGAACTGAAGCAACAGC  49
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGCATATACAAACCACCGCAAAATATGGAGGTAGGAACTGAAGCAACAGC  50

seq1  CATTGAGGAATGCTGCTTACTCTCTCCATTCCCCTGGCTTTCTCTGTTTC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAGGAATGCTGCTTACTCTCTCCATTCCCCTGGCTTTCTCTGTTTC  100

seq1  TGTAGACACTCCAGG-ACCTGCCC-AATGAGTACTACACACAGTGAACTG  147
      ||||||||||||||| |||||||| |||||||||||||||||||||||||
seq2  TGTAGACACTCCAGGAACCTGCCCAAATGAGTACTACACACAGTGAACTG  150

seq1  GGTTCTCTGACATCAACCTTCAGTCAAGAGAATGCCCTATACTTGCCTAC  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTCTGACATCAACCTTCAGTCAAGAGAATGCCCTATACTTGCCTAC  200

seq1  AGGCATTCAGATAGAGGCATTTTCTCAGCTGAAGTTCCTCTTTCCATCGC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATTCAGATAGAGGCATTTTCTCAGCTGAAGTTCCTCTTTCCATCGC  250

seq1  ACACACACACACACACACACACACACACCAGGACACACACCTTCATCTTC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACCAGGACACACACCTTCATCTTC  300

seq1  AGACACTATTTTTAATTAGCTTGTCCTGGCCATTTCTACCTGTTCTACAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACTATTTTTAATTAGCTTGTCCTGGCCATTTCTACCTGTTCTACAT  350

seq1  GACTCAGAGAGGAAAATAAGTCATATATCCCTACATATTGTAAATACAAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAGAGAGGAAAATAAGTCATATATCCCTACATATTGTAAATACAAT  400

seq1  CTGCGTTTTTCTAAGGTACAAGCTTATTTAAGGCAGGATCTGCCCCTGTG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCGTTTTTCTAAGGTACAAGCTTATTTAAGGCAGGATCTGCCCCTGTG  450

seq1  GGGCGGGGGAGGAGGGCATGTGGCATGTAACTTTCTTCATTTCCTATCTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCGGGGGAGGAGGGCATGTGGCATGTAACTTTCTTCATTTCCTATCTT  500

seq1  ATCATTTTATGACGAAACCTCTAAGATGTCATTCAGAGAGTCTTGATAGC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTTATGACGAAACCTCTAAGATGTCATTCAGAGAGTCTTGATAGC  550

seq1  TCACTTCGGTGTGCCAACACACTGAAGAGCATCACTTTAGCACTGCTATT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTCGGTGTGCCAACACACTGAAGAGCATCACTTTAGCACTGCTATT  600

seq1  CACACCCAAAAGAAACAAGCCCCTGCCTGTGTCTATCCTGCCTGACTGTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCCAAAAGAAACAAGCCCCTGCCTGTGTCTATCCTGCCTGACTGTT  650

seq1  TTTTTTCCAATTTGAAAATTCGTCTTTTCAAAGCAAGAGAGAGAATTC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCCAATTTGAAAATTCGTCTTTTCAAAGCAAGAGAGAGAATTC  698