This page provides previous versions of nucleotide polymorphisms of MSM/Ms and JF1/Ms strains, corresponding to GRCm38 coordinate by Liftover from GRCm37.
Previous ver.
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RIKEN MSM/Ms Mouse BAC clones & Library
BAC clone ordering.
BAC Information
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BAC name
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search by nearby gene name.
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Search Result
BAC
Clone Name
B6Ng01-227E19
Chromosome
8 (Build37)
Map Location
17,432,268 - 17,623,292
singlet/doublet
doublet
Overlap gene
Csmd1
Upstream gene
none
Downstream gene
LOC665638
,
LOC100040466
,
Mcph1
Link
Open Mouse BAC browser
Click to get alignment info.
name
Csmd1
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:94109
MGI:2137383
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
LOC665638
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:665638
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins
pseudo
: _no_value
name
LOC100040466
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100040466
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins
name
Mcph1
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:244329
MGI:2443308
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
Csmd1
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:124248565
GeneID:94109
MGI:2137383
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: CUB and Sushi multiple domains 1
transcript_id
: NM_053171.2
name
LOC100040466
(CDS detail)
type
mRNA
link
vega
ensembl
NCBI
xref
GI:149258371
GeneID:100040466
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins
product
: similar to cyclic nucleotide gated channel beta 1
transcript_id
: XM_001474724.1
name
Mcph1
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:37059802
GeneID:244329
MGI:2443308
definition
exception
: unclassified transcription discrepancy
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: microcephaly, primary autosomal recessive 1
transcript_id
: NM_173189.2
name
Csmd1
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:124248566
GeneID:94109
MGI:2137383
definition
GO_component
: GO:0016020 - membrane [Evidence IEA]
GO_function
: GO:0003674 - molecular_function [Evidence ND]
GO_process
: GO:0008150 - biological_process [Evidence ND]
codon_start
: 1
product
: CUB and Sushi multiple domains 1
protein_id
: NP_444401.2
name
LOC100040466
(CDS detail)
type
CDS
link
vega
ensembl
NCBI
xref
GI:149258372
GeneID:100040466
definition
codon_start
: 1
product
: hypothetical protein
protein_id
: XP_001474774.1
name
Mcph1
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:37059803
CCDS:CCDS22124.1
GeneID:244329
MGI:2443308
definition
codon_start
: 1
product
: microcephalin
protein_id
: NP_775281.2
name
LOC665638
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:665638
definition
number
: 4
pseudo
: _no_value
name
LOC665638
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:665638
definition
number
: 3
pseudo
: _no_value
name
LOC665638
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:665638
definition
number
: 2
pseudo
: _no_value
name
LOC665638
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:665638
definition
number
: 1
pseudo
: _no_value
clone name
MSMg01-394J24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-293H12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-055B16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-355F02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-265M20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-168N04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-085A02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-162E08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-162E09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-475F20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-408F07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-376O19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-341I23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-426N02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-383L04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-505L13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-102B08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-458C14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-436F21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-435G10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-054M24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-346J23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-410P02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-163H14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-306K24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-358E07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-071C03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-469L10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-383B18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-426A17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-487O23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-465J09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-109L01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-416A05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-534A05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-506I12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-431P01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-433A22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-189A05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-233C08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-488O18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-292C04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-104N22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-151H12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-151H13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-478A06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-524M18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-108P14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-158P06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-327E23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-149E18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-087C14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-260G14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-260H14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-481M14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-196K21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-144N22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-292I02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-376C21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-519K23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-340G16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-476D19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-509C20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-295A24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-450B20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-543P11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-483C02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-121N10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-416K20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-538N06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-166N14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-205D03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-312M02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-452I14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-530B04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-361O07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-412B18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-156A20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-530M12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-514B05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-530C09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-308E11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-306M19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-380A01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-390K13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-373F24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-121E22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-233N14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-208I02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-309K09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-294H15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-323M02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-398N01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-128F08
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-433P13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-299I20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-162P16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-547J17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-309L07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-114J11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-088G20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-501D08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-441N16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-388E16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-232G18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-053H01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-526H06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-288G10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-140L07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-365P02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-110D04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-323N09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-273P01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-280I09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-223G11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-152G13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-219B14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-173H02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-193G02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-154M02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-249M24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-237J01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-140G24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-157N09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-122M18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-109J13
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-066C05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-230N16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-343H22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-131C20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-318N08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-088L02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-017G12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-069K10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-111I14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-163A05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-003F22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-120J20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-040O13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-346J11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-247O03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-103A02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-147B16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-137G19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-105F13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-198I12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-241D04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-165C12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-344G13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-055I19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-256B09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-336J08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-291A12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-199O22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-208E12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-232O10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-013N04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-233H11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-106C09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-161C02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-227E19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-010O09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-142M13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-339P13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-047E23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-252F16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-008O05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-030P11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-096K16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-141F21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-213O19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-243B18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-073J10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-272F21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-261K07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-292P22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-012K17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-267O17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-307N02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-106C22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-288C07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-297P19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-001P12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-034K04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-214E21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-142O18
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-301M14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-258A09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-171F21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-031M11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-148A21
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doublet
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clone name
B6Ng01-280C12
singlet/doublet
singlet
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unique
clone name
B6Ng01-068A19
singlet/doublet
singlet
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unique
clone name
B6Ng01-062J21
singlet/doublet
singlet
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unique
clone name
B6Ng01-207H19
singlet/doublet
doublet
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unique
clone name
B6Ng01-318L05
singlet/doublet
doublet
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unique
clone name
B6Ng01-034G01
singlet/doublet
singlet
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unique
clone name
B6Ng01-026G18
singlet/doublet
singlet
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unique
clone name
B6Ng01-314M24
singlet/doublet
doublet
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unique
clone name
B6Ng01-295O18
singlet/doublet
doublet
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unique
clone name
B6Ng01-144A08
singlet/doublet
singlet
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unique
clone name
B6Ng01-029M08
singlet/doublet
doublet
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unique
clone name
B6Ng01-292P23
singlet/doublet
singlet
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unique
clone name
B6Ng01-138N19
singlet/doublet
singlet
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unique
clone name
B6Ng01-226G05
singlet/doublet
doublet
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unique
clone name
B6Ng01-237I19
singlet/doublet
singlet
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unique
clone name
B6Ng01-134E11
singlet/doublet
doublet
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unique
clone name
B6Ng01-138F07
singlet/doublet
doublet
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unique
clone name
B6Ng01-172D09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-052P20
singlet/doublet
doublet
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unique
clone name
B6Ng01-342J22
singlet/doublet
doublet
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unique
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B6Ng01-287F05
singlet/doublet
doublet
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unique
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B6Ng01-345O10
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doublet
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unique
clone name
B6Ng01-109L01
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doublet
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unique
clone name
B6Ng01-147J24
singlet/doublet
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clone name
B6Ng01-321D24
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doublet
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B6Ng01-237D08
singlet/doublet
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B6Ng01-041C08
singlet/doublet
doublet
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unique
clone name
B6Ng01-101N05
singlet/doublet
doublet
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unique
clone name
B6Ng01-293L01
singlet/doublet
doublet
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clone name
B6Ng01-259J07
singlet/doublet
doublet
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unique