BAC Information

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BAC

Clone NameB6Ng01-227G20
Chromosome8 (Build37)
Map Location 48,540,289 - 48,663,091
singlet/doubletdoublet
Overlap geneD030016E14Rik, Rwdd4a
Upstream geneLOC667337, Acsl1, Mlf1ip, Ccdc111, Casp3, Irf2, Enpp6, Stox2, 4930448N21Rik
Downstream geneLOC384819, LOC667422, Ing2, LOC546058, Cdkn2aip, LOC100039801, Cldn22, Wwc2, LOC100040113, Dctd, Odz3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-227G20.bB6Ng01-227G20.g
ACCGA041099GA041100
length962391
definitionB6Ng01-227G20.b B6Ng01-227G20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(48,662,526 - 48,663,091)(48,540,289 - 48,540,685)
sequence
gaattctcttggtaggaattgaagcagcagtctttgggaaccacaatggc
agcgtgaaacaaagtatcaggtccagagcttgatacagcagttctgggca
ttttctacagaaataccgacacaaaggcaaagatgcaacatggcttccaa
tggctaagaggtagaaacagactatgcctgtgttccatgaatatgtttct
tacctacaaaggccagaaggcagctatatttccccttgagttggagttat
aggtggttgtaaaccaccatgtggttgctaggaatagaacctgggtactt
tggaaaacagccagttcttaaccacatggttaaaacagtgttcttaacca
tggaatcatctttccagggcctgttgttgatttttaaataattatgcaca
ctgaaacccttgaatatagtaaaaatgtctaatttttcctcttaagaaag
ttcatgtgtatgttcttgcgtctggagtatagatgtttgtctatgtgcat
gtgtaagtacaggcacatgtgtacatatgttgtgtgcatgtgccagaggt
tggtgtagggtgtctggcgtagggtgtcttcctcagtttttttgccacac
tatattttgagacacaatctctcactgaatctacatcttatcaattaggt
tagcttctctcaccaatgaactccagagtaccatctattcctgtccttgt
ccctgctagttctggggttaaaccatcaagtctggcttttttatgtgtat
cttagggttttactgctgtgaacagacatcatgaccaaggccactcttat
aaggacaacatttaattagggctggcttaaaaggttcagaggttcagtcc
agtatcatcaaggcaggcatgatgcaggaagagctgagagttctacatct
ttcatctgaagtctgctaggacaagactaaaccccatgtgtttgggagga
agttttcattgc
catgaaacaggagccacaaatggatagagcttccgggagaattgggagat
tcgtaggtacacttggagttttcacactccagctccaacagcagagagaa
ctctgaggcaagcagaaatattccaggaagaatctggaagaatttgagca
gcatccactgggcctacatgacatgtccagaacactggaccagtgataaa
atatgcaagtaaaaagattaagaaacgaggccgtggtggggcacgccttt
aatcccaacacttgggaggcagaggcaggcggatttctgagttcgaggcc
agcctgatctacagagtgagttccaggacagtcagggctacacagagaaa
ccctgtctcaaaaaacccggggttggggtggtggtgggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_48662526_48663091
seq2: B6Ng01-227G20.b_43_608 (reverse)

seq1  CAGACACCCTACACCAACCTCTGGCACATGCACACAACATATGTACACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACACCCTACACCAACCTCTGGCACATGCACACAACATATGTACACAT  50

seq1  GTGCCTGTACTTACACATGCACATAGACAAACATCTATACTCCAGACGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTGTACTTACACATGCACATAGACAAACATCTATACTCCAGACGCA  100

seq1  AGAACATACACATGAACTTTCTTAAGAGGAAAAATTAGACATTTTTACTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACATACACATGAACTTTCTTAAGAGGAAAAATTAGACATTTTTACTA  150

seq1  TATTCAAGGGTTTCAGTGTGCATAATTATTTAAAAATCAACAACAGGCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAAGGGTTTCAGTGTGCATAATTATTTAAAAATCAACAACAGGCCC  200

seq1  TGGAAAGATGATTCCATGGTTAAGAACACTGTTTTAACCATGTGGTTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGATGATTCCATGGTTAAGAACACTGTTTTAACCATGTGGTTAAG  250

seq1  AACTGGCTGTTTTCCAAAGTACCCAGGTTCTATTCCTAGCAACCACATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGCTGTTTTCCAAAGTACCCAGGTTCTATTCCTAGCAACCACATGG  300

seq1  TGGTTTACAACCACCTATAACTCCAACTCAAGGGGAAATATAGCTGCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTACAACCACCTATAACTCCAACTCAAGGGGAAATATAGCTGCCTT  350

seq1  CTGGCCTTTGTAGGTAAGAAACATATTCATGGAACACAGGCATAGTCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTTTGTAGGTAAGAAACATATTCATGGAACACAGGCATAGTCTGT  400

seq1  TTCTACCTCTTAGCCATTGGAAGCCATGTTGCATCTTTGCCTTTGTGTCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACCTCTTAGCCATTGGAAGCCATGTTGCATCTTTGCCTTTGTGTCG  450

seq1  GTATTTCTGTAGAAAATGCCCAGAACTGCTGTATCAAGCTCTGGACCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTCTGTAGAAAATGCCCAGAACTGCTGTATCAAGCTCTGGACCTGA  500

seq1  TACTTTGTTTCACGCTGCCATTGTGGTTCCCAAAGACTGCTGCTTCAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTGTTTCACGCTGCCATTGTGGTTCCCAAAGACTGCTGCTTCAATT  550

seq1  CCTACCAAGAGAATTC  566
      ||||||||||||||||
seq2  CCTACCAAGAGAATTC  566

seq1: chr8_48540289_48540685
seq2: B6Ng01-227G20.g_69_465

seq1  GAATTCCATGAAACAGGAGCCACAAATGGATAGAGCTTCCGGGAGAATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGAAACAGGAGCCACAAATGGATAGAGCTTCCGGGAGAATTG  50

seq1  GGAGATTCGTAGGTACACTTGGAGTTTTCACACTCCAGCTCCAACAGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATTCGTAGGTACACTTGGAGTTTTCACACTCCAGCTCCAACAGCAG  100

seq1  AGAGAACTCTGAGGCAAGCAGAAATATTCCAGGAAGAATCTGGAAGAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAACTCTGAGGCAAGCAGAAATATTCCAGGAAGAATCTGGAAGAATT  150

seq1  TGAGCAGCATCCACTGGGCCTACATGACATGTCCAGAACACTGGACCAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAGCATCCACTGGGCCTACATGACATGTCCAGAACACTGGACCAGT  200

seq1  GATAAAATATGCAAGTAAAAAGATTAAGAAACGAGGCCGTGGTGGGGCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAATATGCAAGTAAAAAGATTAAGAAACGAGGCCGTGGTGGGGCAC  250

seq1  GCCTTTAATCCCAACACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTAATCCCAACACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTC  300

seq1  GAGGCCAGCCTGATCTACAGAGTGAGTTCCAGGACAGTCAGGGCTACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCAGCCTGATCTACAGAGTGAGTTCCAGGACAGTCAGGGCTACACA  350

seq1  GAGAAACCCTGTCTCAAAAAACCCGGGGTTGGGGTGGTGGTGGGTGG  397
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACCCTGTCTCAAAAAACCCGGGGTTGGGGTGGTGGTGGGTGG  397