BAC Information

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BAC

Clone NameB6Ng01-227M01
Chromosome8 (Build37)
Map Location 61,382,462 - 61,383,631
singlet/doubletsinglet
Overlap gene4930431L04Rik
Upstream genenone
Downstream geneBC030500, LOC665116, LOC436042
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-227M01.bB6Ng01-227M01.g
ACCGA041341GA041342
length1,1481,145
definitionB6Ng01-227M01.b B6Ng01-227M01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgtaattttttcaaccacaattaaatgaatgaagtaatctctg
tgtctccaaattatcaagttaatattcaagaaagtcacttgtgctgagtg
atatatttttgtaagggaagagtctgacttttgaacatggatgtagctga
gcatacctcccactgactcttgcactttgcaatttgtttagattgttgaa
gcttctggctacctttcctggttatctggctactctgcccagacactgtc
attccctcacattctaaatgtaagaaattctgttctgcaaatacaaaatg
tatattaaattaactgtttaaaatctaaggcttaccagaatgaagaaggt
tttacccatcctctacctctacaggaacaattttataaaaataacagtaa
atcttgatggtttctaccagttttatgtttgtttttattttgttctgttg
cttgttttttgtctttttaaattaagatatgtaatctttttatgaccaaa
agttaaagaggaattggaaacatagttctttggttcttactagtaattaa
agtggaagagatacctcagtgtgatttcgtttttaaaggaaatcagagtg
attttaaaaacaaaacaaaacaaaataaaaaaaaaacttttattttaaaa
ttatttcactacaataggtcagaaaaaattttagtaattttttgtgatga
acaatgtaatatcaattacctgttcttgagcgttagtcaaaacagtgaaa
aatttgtattttctagatccactttattgacttaataatgctctgcaact
gatttaacccattcacggagacattgctcttctatctcatcttgtcagga
ggaaaccatttgtaaagcttttctatacaaatactaatgaccttgctaaa
ggcaatggttgcttataaatagcctcgatatgagtaacagtagtatatac
ctttcttgccagccttcaatcctgtttaatatgctaagcatttaatcctc
actgtgtcactgtgaaaggatcatcaaacccattgtcttatactaagtgt
ctgtgagatccatggagtgtcagatttcacaaaaatacttaacttggaca
gaattgactactaatttattcaagcttagtatgctgctaaagaacaaa

gaattcactagaaatttatgattattagcctcagagctagagttttattt
tctaggtgagagaaggtggcactgggagagggctctgaggtaccctgctc
tggaaagagacaagatggctgctctgagtcagagagcaggttaatggaag
ctgctacatcttggggcagatattgatttaactgtgaatttataaaaatg
gcatcatttacttttaggatgaatttatatagcaattttggctaaatcaa
gtaggaaattttgcctgtggttctgaactaaaatagggaaaattagtaac
tgatttcaagtagagagggcagtgagaattatctgctatgaacaggcatt
aattaataaatgtctgtggctccaggtagagagctcaacagatagatggg
atatcaagatggctgctctatatagagagcttaacaagtaaaaactacct
attcctataggcatacattagtgaaagtttgaatgaattggtttaaatat
gatataaagatacattgctctactaagttttataggatactcaaattctg
tctgtgggctccacaggagtcttgtgtttaaatcgtggtttaactaactg
cctccttataagcaggtatagatagaagtgtgaatcaattgtttataaag
gtggtataataaggtctgcaagataactaactcatattctctaaagtggg
cttcatggaaattttggttattatcctacatggcaaatagaaaaacccta
agaatatgcacaatcagtactttagtttacttcatttgttttaattttta
aaatgggtgtgattttgaattctgtggttatattactcctctgggagaga
ggtcaaaataaagttttctccagttactagctcagggatatgctgatttg
ggagaaagtttttgtctttgtgcttttttagaaaagtgattaatgccttt
acacttccagagtaatattgggttgggatattgacgaaagggagagcccc
tgagattgaagataccagtgcaattcaaacaaaaatgaataattggtgat
aatacaggttttgtctgagacttgtaaattacggaatatgcaggtcttgt
gaactcatcgtcgaacatgcttgactaactgccttgacctgaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_61382462_61383631
seq2: B6Ng01-227M01.b_46_1193

seq1  GAATTCATGTAATTTTTTCAACCACAATTAAATGAATGAAGTAATCTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTAATTTTTTCAACCACAATTAAATGAATGAAGTAATCTCTG  50

seq1  TGTCTCCAAATTATCAAGTTAATATTCAAGAAAGTCACTTGTGCTGAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCCAAATTATCAAGTTAATATTCAAGAAAGTCACTTGTGCTGAGTG  100

seq1  ATATATTTTTGTAAGGGAAGAGTCTGACTTTTGAACATGGATGTAGCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTTTTGTAAGGGAAGAGTCTGACTTTTGAACATGGATGTAGCTGA  150

seq1  GCATACCTCCCACTGACTCTTGCACTTTGCAATTTGTTTAGATTGTTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACCTCCCACTGACTCTTGCACTTTGCAATTTGTTTAGATTGTTGAA  200

seq1  GCTTCTGGCTACCTTTCCTGGTTATCTGGCTACTCTGCCCAGACACTGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTGGCTACCTTTCCTGGTTATCTGGCTACTCTGCCCAGACACTGTC  250

seq1  ATTCCCTCACATTCTAAATGTAAGAAATTCTGTTCTGCAAATACAAAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCTCACATTCTAAATGTAAGAAATTCTGTTCTGCAAATACAAAATG  300

seq1  TATATTAAATTAACTGTTTAAAATCTAAGGCTTACCAGAATGAAGAAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTAAATTAACTGTTTAAAATCTAAGGCTTACCAGAATGAAGAAGGT  350

seq1  TTTACCCATCCTCTACCTCTACAGGAACAATTTTATAAAAATAACAGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCCATCCTCTACCTCTACAGGAACAATTTTATAAAAATAACAGTAA  400

seq1  ATCTTGATGGTTTCTACCAGTTTTATGTTTGTTTTTATTTTGTTCTGTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGATGGTTTCTACCAGTTTTATGTTTGTTTTTATTTTGTTCTGTTG  450

seq1  CTTGTTTTTTGTCTTTTTAAATTAAGATATGTAATCTTTTTATGACCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTTTTGTCTTTTTAAATTAAGATATGTAATCTTTTTATGACCAAA  500

seq1  AGTTAAAGAGGAATTGGAAACATAGTTCTTTGGTTCTTACTAGTAATTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAAGAGGAATTGGAAACATAGTTCTTTGGTTCTTACTAGTAATTAA  550

seq1  AGTGGAAGAGATACCTCAGTGTGATTTCGTTTTTAAAGGAAATCAGAGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAAGAGATACCTCAGTGTGATTTCGTTTTTAAAGGAAATCAGAGTG  600

seq1  ATTTTAAAAACAAAACAAAACAAAATAAAAAAAAAACTTTTATTTTAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAAACAAAACAAAACAAAATAAAAAAAAAACTTTTATTTTAAAA  650

seq1  TTATTTCACTACAATAGGTCAGAAAAAATTTTAGTAATTTTTTGTGATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCACTACAATAGGTCAGAAAAAATTTTAGTAATTTTTTGTGATGA  700

seq1  ACAATGTAATATCAATTACCTGTTCTTGAGCGTTAGTCAAAACAGTGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGTAATATCAATTACCTGTTCTTGAGCGTTAGTCAAAACAGTGAAA  750

seq1  AATTTGTATTTTCTAGATCCACTTTATTGACTTAATAATGCTCTGCAACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTATTTTCTAGATCCACTTTATTGACTTAATAATGCTCTGCAACT  800

seq1  GATTTAACCCATTCACGGAGACATTGCTCTTCTATCTCATCTTGTCAGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAACCCATTCACGGAGACATTGCTCTTCTATCTCATCTTGTCAGGA  850

seq1  GGAAACCATTTGTAAAGCTTTTCTATACAAATACTAATGACCTTGCTAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACCATTTGTAAAGCTTTTCTATACAAATACTAATGACCTTGCTAAA  900

seq1  GGCAATGGTTGCTTATAAATAGCCTCGATATGAGTAACAGTAGTATATAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATGGTTGCTTATAAATAGCCTCGATATGAGTAACAGTAGTATATAC  950

seq1  CTTTCTTGCCAGCCTTCAATCCTGTTTAATATGCTAAGCATTTAATCCTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTGCCAGCCTTCAATCCTGTTTAATATGCTAAGCATTTAATCCTC  1000

seq1  ACTGTGTCACTGTGAAAGGGATCATCAAACCCATTGTTCTTATACTAAAG  1050
      ||||||||||||||||| |||||||||||||||||| ||||||||| |||
seq2  ACTGTGTCACTGTGAAA-GGATCATCAAACCCATTG-TCTTATACT-AAG  1047

seq1  TTGGTCTGTGGAAGATCCATGGAGTGTCAGATATCAC-AAAATACTAAAC  1099
      |  |||||||  |||||||||||||||||||| |||| |||||||| |||
seq2  T--GTCTGTG--AGATCCATGGAGTGTCAGATTTCACAAAAATACTTAAC  1093

seq1  TTGGGAACCAGAATTTGAACTAACCTAATTTTATTCAAAGCTTATGTAAT  1149
      ||||    |||||||   ||||  |||| ||||||| ||||||| || ||
seq2  TTGG---ACAGAATT--GACTA--CTAA-TTTATTC-AAGCTTA-GT-AT  1132

seq1  GCCCTGCTAAAAGAGAACAAA  1170
      |  |||||||   ||||||||
seq2  G--CTGCTAA---AGAACAAA  1148


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