BAC Information

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BAC

Clone NameB6Ng01-228A09
Chromosome8 (Build37)
Map Location 92,167,296 - 92,321,051
singlet/doubletdoublet
Overlap genenone
Upstream geneNod2, Cyld, LOC675985, Sall1, LOC100041089, EG625801, EG384862
Downstream geneTox3, LOC100041133
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-228A09.bB6Ng01-228A09.g
ACCGA041540GA041541
length3361,030
definitionB6Ng01-228A09.b B6Ng01-228A09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(92,320,716 - 92,321,051)(92,167,296 - 92,168,328)
sequence
aaaccaaaatcataagtacaaacacttcctctatgtaggctacctacaaa
attatttgatgcatgtaacctctatgaggaagtggtggaagaccctggta
gagggagttgatataaaaaatattcacagtaaagatctgtgacgttccta
agaagacaagtgtgttactctgctctttacctataaaactgagaacagag
aggttacaaggtcagaagagtaaccacagcagactttctgagtattttgg
taagattaacattggtggtagctgttaaccaacagtagggagatttgctg
gaagccagcatttgttgggggaagggggggagggac
gaattctgatctccacaaaaaataaataataaaaaaaatggtggctcaga
tatattgagtggccagagtgaggtgggtcatgcagccttgtgtgatcaga
tcctggactctgatgttcttcctctgtattccataatgatgccaatcacc
tgtcctgttaataatagttcagcatcctgtcttccaaaccgagccatctt
cacagccacacttttagtgtcctattgacagtaagcctaaagaagaaagc
tatcgatgctcccaaactaattggtactatctccctaactctagcttcta
tttagtgtgatatataccccagtcatcagttctactctcagaagacaaag
aagttgcataaaataaagcattgttttcttccacttctaattcctccatc
ctaaggacattccctgagcactgatgctgtagtcgggtcctgcagtcatc
tcctgccccaactatttcaatcatttctgtaacttcagaatgaaccatcc
tcttcagggaagtgcagcaaagagaaaaaaaagccaagtagtgacaggtt
ctttgacacacacacacacacacacacacacacacacacacacacacaca
cacacacatgttcctcagttctaatagcgatgacattgctgggggcacat
gaagtcagagcagtctgacttagacacttggattcttaaaaactgattta
aaaattacggctgtgctatgtgcgggaagaatggatgccctttaacggag
cttttatgccaagcatctcatttgctttccacctcctccttgaatggcta
cgtattattaatacctttagaaaatgcaccgaattacaggaatgaaaagc
agaggggaaagaatgaggtgcccttcattcaccctggcatgtgtgaagta
taatgcccattcagagtgctagtctctcccagggaaatgcaaaggcccag
gaatccagtcacatgatttccttggggctgggagagagctgaggcaacca
gggcccagccttagtggaagggtgtggtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_92320716_92321051
seq2: B6Ng01-228A09.b_51_386 (reverse)

seq1  GTCCCTCCCCCCCTTCCCCCAACAAATGCTGGCTTCCAGCAAATCTCCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTCCCCCCCTTCCCCCAACAAATGCTGGCTTCCAGCAAATCTCCCT  50

seq1  ACTGTTGGTTAACAGCTACCACCAATGTTAATCTTACCAAAATACTCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTGGTTAACAGCTACCACCAATGTTAATCTTACCAAAATACTCAGA  100

seq1  AAGTCTGCTGTGGTTACTCTTCTGACCTTGTAACCTCTCTGTTCTCAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTGCTGTGGTTACTCTTCTGACCTTGTAACCTCTCTGTTCTCAGTT  150

seq1  TTATAGGTAAAGAGCAGAGTAACACACTTGTCTTCTTAGGAACGTCACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGGTAAAGAGCAGAGTAACACACTTGTCTTCTTAGGAACGTCACAG  200

seq1  ATCTTTACTGTGAATATTTTTTATATCAACTCCCTCTACCAGGGTCTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTACTGTGAATATTTTTTATATCAACTCCCTCTACCAGGGTCTTCC  250

seq1  ACCACTTCCTCATAGAGGTTACATGCATCAAATAATTTTGTAGGTAGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTTCCTCATAGAGGTTACATGCATCAAATAATTTTGTAGGTAGCCT  300

seq1  ACATAGAGGAAGTGTTTGTACTTATGATTTTGGTTT  336
      ||||||||||||||||||||||||||||||||||||
seq2  ACATAGAGGAAGTGTTTGTACTTATGATTTTGGTTT  336

seq1: chr8_92167296_92168328
seq2: B6Ng01-228A09.g_68_1097

seq1  GAATTCTGATCTCCACAAAAAATAAATAATAAAAAAAATGGTGGCTCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGATCTCCACAAAAAATAAATAATAAAAAAAATGGTGGCTCAGA  50

seq1  TATATTGAGTGGCCAGAGTGAGGTGGGTCATGCAGCCTTGTGTGATCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTGAGTGGCCAGAGTGAGGTGGGTCATGCAGCCTTGTGTGATCAGA  100

seq1  TCCTGGACTCTGATGTTCTTCCTCTGTATTCCATAATGATGCCAATCACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGACTCTGATGTTCTTCCTCTGTATTCCATAATGATGCCAATCACC  150

seq1  TGTCCTGTTAATAATAGTTCAGCATCCTGTCTTCCAAACCGAGCCATCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTGTTAATAATAGTTCAGCATCCTGTCTTCCAAACCGAGCCATCTT  200

seq1  CACAGCCACACTTTTAGTGTCCTATTGACAGTAAGCCTAAAGAAGAAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCCACACTTTTAGTGTCCTATTGACAGTAAGCCTAAAGAAGAAAGC  250

seq1  TATCGATGCTCCCAAACTAATTGGTACTATCTCCCTAACTCTAGCTTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCGATGCTCCCAAACTAATTGGTACTATCTCCCTAACTCTAGCTTCTA  300

seq1  TTTAGTGTGATATATACCCCAGTCATCAGTTCTACTCTCAGAAGACAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTGTGATATATACCCCAGTCATCAGTTCTACTCTCAGAAGACAAAG  350

seq1  AAGTTGCATAAAATAAAGCATTGTTTTCTTCCACTTCTAATTCCTCCATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGCATAAAATAAAGCATTGTTTTCTTCCACTTCTAATTCCTCCATC  400

seq1  CTAAGGACATTCCCTGAGCACTGATGCTGTAGTCGGGTCCTGCAGTCATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGACATTCCCTGAGCACTGATGCTGTAGTCGGGTCCTGCAGTCATC  450

seq1  TCCTGCCCCAACTATTTCAATCATTTCTGTAACTTCAGAATGAACCATCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCCCCAACTATTTCAATCATTTCTGTAACTTCAGAATGAACCATCC  500

seq1  TCTTCAGGGAAGTGCAGCAAAGAGAAAAAAAAGCCAAGTAGTGACAGGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAGGGAAGTGCAGCAAAGAGAAAAAAAAGCCAAGTAGTGACAGGTT  550

seq1  CTTTGACACACACACACACACACACACACACACACACACACACACACACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGACACACACACACACACACACACACACACACACACACACACACACA  600

seq1  CACACACATGTTCCTCAGTTCTAATAGCGATGACATTGCTGGGGGCACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACATGTTCCTCAGTTCTAATAGCGATGACATTGCTGGGGGCACAT  650

seq1  GAAGTCAGAGCAGTCTGACTTAGACACTTGGATTCTTAAAAACTGATTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCAGAGCAGTCTGACTTAGACACTTGGATTCTTAAAAACTGATTTA  700

seq1  AAAATTACGGCTGTGCTATGTGCGGGAAGAATGGATGCCCTTTAACGGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTACGGCTGTGCTATGTGCGGGAAGAATGGATGCCCTTTAACGGAG  750

seq1  CTTTTATGCCAAGCATCTCATTTGCTTTCCACCTCCTCCTTGAATGGCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTATGCCAAGCATCTCATTTGCTTTCCACCTCCTCCTTGAATGGCTA  800

seq1  CGTATTATTAATACCTTTAGAAAATGCACCGAATTACAGGAATGAAAAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTATTATTAATACCTTTAGAAAATGCACCGAATTACAGGAATGAAAAGC  850

seq1  AGAGGGGAAAGAATGAGGTGCCCTTCATTCACCCTGGCATGTTGTGAAGT  900
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AGAGGGGAAAGAATGAGGTGCCCTTCATTCACCCTGGCATG-TGTGAAGT  899

seq1  ATAATGCCCATTCAGGAGTGCTAGTCTCTCCCAGGGAAATGCAAGGGCCC  950
      |||||||||||||| ||||||||||||||||||||||||||||| || ||
seq2  ATAATGCCCATTCA-GAGTGCTAGTCTCTCCCAGGGAAATGCAAAGG-CC  947

seq1  CAGGAATCCAGTCACATGATTTCCTTGGGGCTGGGAGAGAGCTGAGGCAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAATCCAGTCACATGATTTCCTTGGGGCTGGGAGAGAGCTGAGGCAA  997

seq1  CCCAGGGCCCAGCCCTAGTGG-AGGGTGTGGTAT  1033
       ||||||||||||| |||||| ||||||||||||
seq2  -CCAGGGCCCAGCCTTAGTGGAAGGGTGTGGTAT  1030