BAC Information

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BAC

Clone NameB6Ng01-228E19
Chromosome8 (Build37)
Map Location 43,794,957 - 43,796,134
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC671994, Zfp353, EG620772, LOC628212
Downstream geneTriml1, LOC622082, EG622117, LOC100039417, Zfp42, Adam26b, Adam26a, EG384813, Adam34, EG384814, LOC100039472
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-228E19.bB6Ng01-228E19.g
ACCGA041745GA041746
length1,2071,149
definitionB6Ng01-228E19.b B6Ng01-228E19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ggaattctcatgtccttctgtgactgagttgtagttctagtaaggcatgt
atcttaggtgttctgaaaatattgaagcaaatttttattagtctagatat
tattagaaatgcttacaccatgtatgtatcacgcaatacaaatatataaa
attaattgcatgtctaattttctaatggcttgcatattaaatccatgtat
actcattgaaaactcaattattggaactcccaatgcttgtcgcatttcat
gatgtagacgtcaaactgaatgaacaaagtgccacagtatctttctgctc
aggagcaaaaacaaatgagaagctgaactcagtggtttagaaaggacggc
tgaaaataattggaaagcaatgataggtactttagaacaagtaaggtaaa
ttaaactacaccactggagtctctggatgtttatatgtacatgatcgcca
tctgtacacggaagccaatccggaaacttctagtaagcatgatggttttt
ttagagttatagaaaaccacgatgaagagtgggtttgctcatgtacatat
ttatctttagacacagagaagccaaattactaggaaatgcaaattttagg
gtattctcagtcaggatttgttgtactgtgaaatagacacagtctcattc
taagcagaagcacagtcccatttcatcaattaaaacacttcagggcgcat
catcagaagagcatttcctgtggcaaagcaaaatttgcaaactgtacctt
aacagagggactcaggaataaattgtagccttggaccaaattcagaagtt
taaaaaatggacaactgaaaaatagattttttttaatttaaaaatatata
cagatatattttacatattcactttcacaatcctgctcactgttctctcc
ctgtcatcctctctcacaaatccttcctgcatgcccttttcctttgagca
ggttatctcccccaatccctcaggaaccatcctaccttagtatttcaagt
tctcttgtgaggctaggtgctttcctcctccttactagggcagcacagct
aagagaaacatattcccacatacagacaacagactttgggacagcccctt
gtcacagttgtttcaagatcccacatgagttccaggctgccataatctac
tatattatggttgagaggaggccttaggtccaggccttatgcatgttcct
ttcgttg

gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaatcctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gtttttgttgagtatagccttttgtagaaggatctgatggtgtttttgga
tttcttcaggatctgttgttatgtctccctttttcatttctgatttttgt
taattaggattttgtccctgtgccctttagtgagtctagctaagggttta
tctatcttgttgattttctcaaagaaccaactcctcatttggttaatttc
tttgaatagttcttcttgtttccacttggttgatttcacccctgagtttg
attatttccttccgtctactcctctggggtgaatttgcttccttttttct
aagggcttttaaatgtgtggtcaagctgctagtatgtgctgctccccgtt
ttcttcttggaggcactcaacgctatgagtttccctcttagaaaatgctt
tcattgtgtccatagatagggtacgttgtgggcttcaatttcataatctc
taaaggctttaatttctttctttattcatcctggaccagtattaatgaaa
agagtgtaattcagacttcacaggggaaggtttggctttcatattatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_43794957_43796134
seq2: B6Ng01-228E19.b_50_1255 (reverse)

seq1  CAACGAAA-GAACATGCATA--GGCTGGACCTAA-GCCTCCTCTCA--CA  44
      |||||||| |||||||||||  | |||||||||| |||||||||||  ||
seq2  CAACGAAAGGAACATGCATAAGGCCTGGACCTAAGGCCTCCTCTCAACCA  50

seq1  T-ATATAGTAGA-TAT-GCAGCTTGGACTTCATGT-GGATCTTG-AACAA  89
      | |||||||||| ||| ||||| ||||  |||||| |||||||| |||||
seq2  TAATATAGTAGATTATGGCAGCCTGGAACTCATGTGGGATCTTGAAACAA  100

seq1  CTGTGAC-AGGGGCTGTCCCAAAGTCTGTTGTCTGTATGTGGG-ATATGT  137
      ||||||| ||||||||||||||||||||||||||||||||||| ||||||
seq2  CTGTGACAAGGGGCTGTCCCAAAGTCTGTTGTCTGTATGTGGGAATATGT  150

seq1  TTCTC-TAGCTGTGCTG-CCTAGT-AGGA-GAGG-AAGCACCTAGCCTCA  182
      ||||| ||||||||||| |||||| |||| |||| |||||||||||||||
seq2  TTCTCTTAGCTGTGCTGCCCTAGTAAGGAGGAGGAAAGCACCTAGCCTCA  200

seq1  C-AGAG-ACTTGAAATACTAAGGTAGGATGGTTCCTGAGGGATTGGGGGA  230
      | |||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGAACTTGAAATACTAAGGTAGGATGGTTCCTGAGGGATTGGGGGA  250

seq1  GAT-ACCTGCTCAAAGGAAAAGGGCATGCAGGAAGGA-TTGTGAGAGAGG  278
      ||| ||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GATAACCTGCTCAAAGGAAAAGGGCATGCAGGAAGGATTTGTGAGAGAGG  300

seq1  ATGACAGGGAGAGAACAGTGAGCAGGA-TGTG-AAGTGAATATGTAAAAT  326
      ||||||||||||||||||||||||||| |||| |||||||||||||||||
seq2  ATGACAGGGAGAGAACAGTGAGCAGGATTGTGAAAGTGAATATGTAAAAT  350

seq1  ATATCTGTATATA-TTTTAAATT-AAAAAAATCTA-TTTTCAGTTGTCCA  373
      ||||||||||||| ||||||||| ||||||||||| ||||||||||||||
seq2  ATATCTGTATATATTTTTAAATTAAAAAAAATCTATTTTTCAGTTGTCCA  400

seq1  TTTTTTAAACTTCTGAATTTGGTCCAAGGCTACAATTTATTCCTGAGTCC  423
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAAACTTCTGAATTTGGTCCAAGGCTACAATTTATTCCTGAGTCC  450

seq1  CTCTGTTAAGGTACAGTTTGCAAATTTTGC-TTGCCACAGGAAATGCTCT  472
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CTCTGTTAAGGTACAGTTTGCAAATTTTGCTTTGCCACAGGAAATGCTCT  500

seq1  TCTGATGATGCGCCCTGAAGTGTTTTAATTGATGAAATGGGACTGTGCTT  522
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATGATGCGCCCTGAAGTGTTTTAATTGATGAAATGGGACTGTGCTT  550

seq1  CTGCTTAGAATGAGACTGTGTCTATTTCACAGTACAACAAATCCTGACTG  572
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTAGAATGAGACTGTGTCTATTTCACAGTACAACAAATCCTGACTG  600

seq1  AGAATACCCTAAAATTTGCATTTCCTAGTAATTTGGCTTCTCTGTGTCTA  622
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATACCCTAAAATTTGCATTTCCTAGTAATTTGGCTTCTCTGTGTCTA  650

seq1  AAGATAAATATGTACATGAGCAAACCCACTCTTCATCGTGGTTTTCTATA  672
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAAATATGTACATGAGCAAACCCACTCTTCATCGTGGTTTTCTATA  700

seq1  ACTCTAAAAAAACCATCATGCTTACTAGAAGTTTCCGGATTGGCTTCCGT  722
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTAAAAAAACCATCATGCTTACTAGAAGTTTCCGGATTGGCTTCCGT  750

seq1  GTACAGATGGCGATCATGTACATATAAACATCCAGAGACTCCAGTGGTGT  772
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGATGGCGATCATGTACATATAAACATCCAGAGACTCCAGTGGTGT  800

seq1  AGTTTAATTTACCTTACTTGTTCTAAAGTACCTATCATTGCTTTCCAATT  822
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAATTTACCTTACTTGTTCTAAAGTACCTATCATTGCTTTCCAATT  850

seq1  ATTTTCAGCCGTCCTTTCTAAACCACTGAGTTCAGCTTCTCATTTGTTTT  872
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAGCCGTCCTTTCTAAACCACTGAGTTCAGCTTCTCATTTGTTTT  900

seq1  TGCTCCTGAGCAGAAAGATACTGTGGCACTTTGTTCATTCAGTTTGACGT  922
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCTGAGCAGAAAGATACTGTGGCACTTTGTTCATTCAGTTTGACGT  950

seq1  CTACATCATGAAATGCGACAAGCATTGGGAGTTCCAATAATTGAGTTTTC  972
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATCATGAAATGCGACAAGCATTGGGAGTTCCAATAATTGAGTTTTC  1000

seq1  AATGAGTATACATGGATTTAATATGCAAGCCATTAGAAAATTAGACATGC  1022
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGTATACATGGATTTAATATGCAAGCCATTAGAAAATTAGACATGC  1050

seq1  AATTAATTTTATATATTTGTATTGCGTGATACATACATGGTGTAAGCATT  1072
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATTTTATATATTTGTATTGCGTGATACATACATGGTGTAAGCATT  1100

seq1  TCTAATAATATCTAGACTAATAAAAATTTGCTTCAATATTTTCAGAACAC  1122
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAATAATATCTAGACTAATAAAAATTTGCTTCAATATTTTCAGAACAC  1150

seq1  CTAAGATACATGCCTTACTAGAACTACAACTCAGTCACAGAAGGACATGA  1172
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGATACATGCCTTACTAGAACTACAACTCAGTCACAGAAGGACATGA  1200

seq1  GAATTC  1178
      ||||||
seq2  GAATTC  1206


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