BAC Information

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BAC

Clone NameB6Ng01-228N22
Chromosome8 (Build37)
Map Location 116,366,934 - 116,563,488
singlet/doubletdoublet
Overlap geneAdamts18
Upstream geneCntnap4, LOC100042061, Mon1b, 4930481F22Rik
Downstream geneNudt7, AI427515, Clec3a, Wwox
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-228N22.bB6Ng01-228N22.g
ACCGA042168GA042169
length1,064830
definitionB6Ng01-228N22.b B6Ng01-228N22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(116,562,444 - 116,563,488)(116,366,934 - 116,367,751)
sequence
gaattcaatgcaaagttctggaaattagatgatgcttaattattacggca
ctataaagaaactgtcagcaagtctagggaattcaggctatttcttccta
cttctaaagctgtggcagacataactaatcaattgtatattctccaatgt
taagctaatgaggaggactttgacattgcttgaaatgatcagttcaaatc
tactttttttctactgagttgcagataggatctgtctgttggtagtttat
tggattattttggcctgaaattcacttatagtaaagcaagaaaaaatatc
cctgggcagccacagtaaagcagttggctatttttagatttttctggatg
aacatcaccatcaatatagaattccctttatgcctcagcagattctgtac
cctgactgagagccagggttgaaagcctctgactgcacccacagctatgt
aatttaagggtctgttcttttcctggctggtcagtagtctgtacttgaat
tcatgctgcctacagtaagggtctaagtgttaatccccttgaacatcatt
gcccagtgcagtgtcctcagatcttggtaataggatgaggtaggttcctg
agtttactcaggggctatctcatgtgtttctatcccctgcattgtaaaga
gaagatttcccagataacttgaggggtgaagaaagagggaagcggtgttg
gagggtggcagggtcctattttctctttgagagaagaatttcatcccatt
gcttggagaaagccagcatgattcgcatggtcctgagtctgtgattggat
agagtggattatgctaacacgtttggaaatagctagtgccactcgacgga
cattccaagaattattaaaattttgctgtgtggctggggaagatggcata
atcaagtgaatatacttgtttgttaagctctggaggatcctgagtttgat
cacccatcacctcaggtataaatgccctggttgtaacggtctgcctttgc
catcctcagcactgggcagccagtaggatagctgaatctcttagggctga
atggtctctagaaa

gaattcctgagtgttgaacacggagaggctacattttgtaagaatgagaa
gacatagagacttggaagcctgggatgagatctccccggttacttctact
tttagtacatttaacacttctatctattttgtataccttatgtatgtgtg
tgggtttgagtgtgccacagcatgcatgcagaggtcagaggagctagctc
tttcctcccaccatgtgtgtcccaggggattgagcctaagtcaatggggc
ttgagagcaagcatccttacctactgagctaactcatcagcaatagtcct
ggttttagggatgagaaaactaaggcacacgcagaaccctactagctggt
actggtttgataatgagaatcagggtctgcaactgttcattgtgagtgtt
tggaatgagatggtttaaggctctgtggtggagggagtaaccctggaaga
cttttggaaattggaataggcagagggtgggaaacacaaggaggaaagcc
aaaacccagcagaagactcaacacacacacacacacacacacacacacac
acaaccacacacagacacacagacacaaacaaaggatgaacactaagata
tgtccatgcatgtgcgtgtacatgtgtgtgtaaagcatgtcataaacacc
ccagggaatctttgagacagtcatcattcaattgaaatgagattagcctg
ggtaattgctaactcgtttttattttgtcatataaacacgctaaagaata
cccatgtcttgtggtttatggttttggctggaatttcaaggcaattatgt
gaggaataaaaaatgttgtaattaaaaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_116562444_116563488
seq2: B6Ng01-228N22.b_50_1113 (reverse)

seq1  TTTCT-GAGACCATTCAGCCCT-AGAGATTCACCT-TCCT-CTGCCT-CC  45
      ||||| |||||||||||||||| ||||||||| || |||| ||| || ||
seq2  TTTCTAGAGACCATTCAGCCCTAAGAGATTCAGCTATCCTACTGGCTGCC  50

seq1  CAGTGCTG-GGGTTGCACATGCAGACCGTTAC-ACCA-GGCATTTATACC  92
      |||||||| || | ||| | |||||||||||| |||| ||||||||||||
seq2  CAGTGCTGAGGATGGCAAAGGCAGACCGTTACAACCAGGGCATTTATACC  100

seq1  TGA-GTGCT-GGTGATCAAACTCA-GATCCT-CATGGCTTAAC-AACAAG  137
      ||| ||| | |||||||||||||| |||||| ||  ||||||| ||||||
seq2  TGAGGTGATGGGTGATCAAACTCAGGATCCTCCAGAGCTTAACAAACAAG  150

seq1  TATTTTCAC-TGACTATGCCATC-TCCCCAGCCACACAGCAAAATTTTAA  185
      ||| ||||| ||| ||||||||| ||||||||||||||||||||||||||
seq2  TATATTCACTTGATTATGCCATCTTCCCCAGCCACACAGCAAAATTTTAA  200

seq1  T-ATTCTTGG-ATGTCCGTCGAGTGGCACTAGCTATTTCCAAACGTGTTA  233
      | |||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TAATTCTTGGAATGTCCGTCGAGTGGCACTAGCTATTTCCAAACGTGTTA  250

seq1  GCATAATCCACTCTATCC-ATCACAGACTCAGGACCATGCGAATCATGCT  282
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GCATAATCCACTCTATCCAATCACAGACTCAGGACCATGCGAATCATGCT  300

seq1  GGCTTTCTCC-AGCAATGGGATGCAATTCTTCTCTCAAAGAGAAAATAGG  331
      |||||||||| |||||||||||| ||||||||||||||||||||||||||
seq2  GGCTTTCTCCAAGCAATGGGATGAAATTCTTCTCTCAAAGAGAAAATAGG  350

seq1  ACCCTGCCACCCTCCAACACCGCTTCCCTCTTTCTTCACCCCTCAAGTTA  381
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGCCACCCTCCAACACCGCTTCCCTCTTTCTTCACCCCTCAAGTTA  400

seq1  TCTGGGAAATCTTCTCTTTACAATGCAGGGGATAGAAACACATGAGATAG  431
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGAAATCTTCTCTTTACAATGCAGGGGATAGAAACACATGAGATAG  450

seq1  CCCCTGAGTAAACTCAGGAACCTACCTCATCCTATTACCAAGATCTGAGG  481
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGAGTAAACTCAGGAACCTACCTCATCCTATTACCAAGATCTGAGG  500

seq1  ACACTGCACTGGGCAATGATGTTCAAGGGGATTAACACTTAGACCCTTAC  531
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGCACTGGGCAATGATGTTCAAGGGGATTAACACTTAGACCCTTAC  550

seq1  TGTAGGCAGCATGAATTCAAGTACAGACTACTGACCAGCCAGGAAAAGAA  581
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGCAGCATGAATTCAAGTACAGACTACTGACCAGCCAGGAAAAGAA  600

seq1  CAGACCCTTAAATTACATAGCTGTGGGTGCAGTCAGAGGCTTTCAACCCT  631
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCCTTAAATTACATAGCTGTGGGTGCAGTCAGAGGCTTTCAACCCT  650

seq1  GGCTCTCAGTCAGGGTACAGAATCTGCTGAGGCATAAAGGGAATTCTATA  681
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTCAGTCAGGGTACAGAATCTGCTGAGGCATAAAGGGAATTCTATA  700

seq1  TTGATGGTGATGTTCATCCAGAAAAATCTAAAAATAGCCAACTGCTTTAC  731
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGGTGATGTTCATCCAGAAAAATCTAAAAATAGCCAACTGCTTTAC  750

seq1  TGTGGCTGCCCAGGGATATTTTTTCTTGCTTTACTATAAGTGAATTTCAG  781
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCTGCCCAGGGATATTTTTTCTTGCTTTACTATAAGTGAATTTCAG  800

seq1  GCCAAAATAATCCAATAAACTACCAACAGACAGATCCTATCTGCAACTCA  831
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAAATAATCCAATAAACTACCAACAGACAGATCCTATCTGCAACTCA  850

seq1  GTAGAAAAAAAGTAGATTTGAACTGATCATTTCAAGCAATGTCAAAGTCC  881
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAAAAAAGTAGATTTGAACTGATCATTTCAAGCAATGTCAAAGTCC  900

seq1  TCCTCATTAGCTTAACATTGGAGAATATACAATTGATTAGTTATGTCTGC  931
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCATTAGCTTAACATTGGAGAATATACAATTGATTAGTTATGTCTGC  950

seq1  CACAGCTTTAGAAGTAGGAAGAAATAGCCTGAATTCCCTAGACTTGCTGA  981
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCTTTAGAAGTAGGAAGAAATAGCCTGAATTCCCTAGACTTGCTGA  1000

seq1  CAGTTTCTTTATAGTGCCGTAATAATTAAGCATCATCTAATTTCCAGAAC  1031
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTCTTTATAGTGCCGTAATAATTAAGCATCATCTAATTTCCAGAAC  1050

seq1  TTTGCATTGAATTC  1045
      ||||||||||||||
seq2  TTTGCATTGAATTC  1064


seq1: chr8_116366934_116367751
seq2: B6Ng01-228N22.g_72_901

seq1  GAATTCCTGAGTGTTGAACACGGAGAGGCTACATTTTGTAAGAATGAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGAGTGTTGAACACGGAGAGGCTACATTTTGTAAGAATGAGAA  50

seq1  GACATAGAGACTTGGAAGCCTGGGATGAGATCTCCCCGGTTACTTCTACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATAGAGACTTGGAAGCCTGGGATGAGATCTCCCCGGTTACTTCTACT  100

seq1  TTTAGTACATTTAACACTTCTATCTATTTTGTATACCTTATGTATGTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTACATTTAACACTTCTATCTATTTTGTATACCTTATGTATGTGTG  150

seq1  TGGGTTTGAGTGTGCCACAGCATGCATGCAGAGGTCAGAGGAGCTAGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTGAGTGTGCCACAGCATGCATGCAGAGGTCAGAGGAGCTAGCTC  200

seq1  TTTCCTCCCACCATGTGTGTCCCAGGGGATTGAGCCTAAGTCAATGGGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCCCACCATGTGTGTCCCAGGGGATTGAGCCTAAGTCAATGGGGC  250

seq1  TTGAGAGCAAGCATCCTTACCTACTGAGCTAACTCATCAGCAATAGTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAGCAAGCATCCTTACCTACTGAGCTAACTCATCAGCAATAGTCCT  300

seq1  GGTTTTAGGGATGAGAAAACTAAGGCACACGCAGAACCCTACTAGCTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTAGGGATGAGAAAACTAAGGCACACGCAGAACCCTACTAGCTGGT  350

seq1  ACTGGTTTGATAATGAGAATCAGGGTCTGCAACTGTTCATTGTGAGTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTTTGATAATGAGAATCAGGGTCTGCAACTGTTCATTGTGAGTGTT  400

seq1  TGGAATGAGATGGTTTAAGGCTCTGTGGTGGAGGGAGTAACCCTGGAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATGAGATGGTTTAAGGCTCTGTGGTGGAGGGAGTAACCCTGGAAGA  450

seq1  CTTTTGGAAATTGGAATAGGCAGAGGGTGGGAAACACAAGGAGGAAAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGGAAATTGGAATAGGCAGAGGGTGGGAAACACAAGGAGGAAAGCC  500

seq1  AAAACCCAGCAGAAGACTCAACACACACACACACACACACACACACACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCCAGCAGAAGACTCAACACACACACACACACACACACACACACAC  550

seq1  ACAACCACACACAGACACACAGACACAAACAAAGGATGAACACTAAGATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCACACACAGACACACAGACACAAACAAAGGATGAACACTAAGATA  600

seq1  TGTCCATGCATGTGCGTGTACATGTGTGTGT-AAGCATGTCAT-AACA-C  647
      ||||||||||||||||||||||||||||||| ||||||||||| |||| |
seq2  TGTCCATGCATGTGCGTGTACATGTGTGTGTAAAGCATGTCATAAACACC  650

seq1  CCAGGGAATCTTTGAGACAGTCATCATTCAATTGAATTGAGATTAG-CTG  696
      |||||||||||||||||||||||||||||||||||| ||||||||| |||
seq2  CCAGGGAATCTTTGAGACAGTCATCATTCAATTGAAATGAGATTAGCCTG  700

seq1  GGT-ATTGCTAACTCG-TTTTATTTTGTCATTTAAACACGCTAAAGAATA  744
      ||| |||||||||||| |||||||||||||| ||||||||||||||||||
seq2  GGTAATTGCTAACTCGTTTTTATTTTGTCATATAAACACGCTAAAGAATA  750

seq1  -CCATGGC-TGTGG-TTAGGGTTTTGGCTGG-ATTTCAGGGCAA-TATGT  789
       ||||| | ||||| ||| |||||||||||| |||||| ||||| |||||
seq2  CCCATGTCTTGTGGTTTATGGTTTTGGCTGGAATTTCAAGGCAATTATGT  800

seq1  GAGGAATAAAAAA-GTTGTAACTAAAAAAA  818
      ||||||||||||| ||||||| ||||||||
seq2  GAGGAATAAAAAATGTTGTAATTAAAAAAA  830


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