BAC Information

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BAC

Clone NameB6Ng01-229E21
Chromosome8 (Build37)
Map Location 104,056,761 - 104,057,774
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042092, LOC384895
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-229E21.bB6Ng01-229E21.g
ACCGA042491GA042492
length1,2191,019
definitionB6Ng01-229E21.b B6Ng01-229E21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactcggacaaccggattcttctacggcaaagctttattgcttca
tctgaaggaagaccccgaacaaggaaaatggtgctacttatatacccttc
cgtgtgacgtgtcagctcctgattagctgctcactcattaccccactact
aagcccctggatgggcagtgacttggcacgaatttactcttgcacctgcg
cacattacttgtttaccagttaggcacagcagaggctcatgatggcgatt
gctcacggctctccacagtgggccatatagacagtgaatataaaacatca
aattgtagctgttgaatatttgaatagggagatatatgaatgagataata
agattcatccttctatattttatgtatgtgggcctgtgtaccagaggctt
tccatgaagatctctgggcaggcctggttcgagggttctggtgaaagtaa
gcgagtgcaggcactctggttattccacgcagccctgcacttggccaaca
aaagactgactagccagtgaggagtgcggtggagcttcagatggtgtttc
agcagagcagacctcttcccaagtgttacagctcttaggacagaaactct
tggacatcagagtagttctcgcacacctttaacccttccagataggattc
ttacatatagtttgggggtgagtcatggtttgacaacaggtatttctcat
tgctttggtctgagagctttggggaaaccttattttcatgtgggagggct
tggtgctgctcctctgtgactgatggccacacacatctctgccagtgact
gtgggaggctgtagctgcaaaaagagctaggggtccaggatgcatgggcc
gaactcctacagtcccatgaaggcagaaatcaccacccacctggtctctg
tggttccaggactatgcttgcctggacagctgtctgttcacacccacccc
ccacatatgtatatgaaacacattctaagtgtcagcctttctcagtgagc
actggtatgtaaactgatagattcaggttataaaacaccgtctatgttct
agtagcaattatgtcctacttaaggaaaagaggtatctttgaatgttcca
gccaataaatatgtcctaagattccgattatatattagagactgtgctgt
tatttagcatggctgaacttcagagatagattcgataaacctcatatgga
cacaaattgtatgcagact
gaattctttggtgacaggaaagatgtagacatgatataattacctcatag
tatcaaaaataaaaagttaaaaaaatgtgaacttaatggtaccagagaac
atatttgttgccacatacccagcaaaggatctgacatgaaacttagagga
tattaaagatatctctgagaaagagggggctaagcatttggtccaggaaa
tgaacaaagaaaaggtccagtagcttgcttaaactttgtacttttagaaa
atattttctaagaaaatccaaattaattgaaggtagaggtagttgaaaga
acacacacacacacacacacacacaagatatgtgaatctgtgaccattat
tgtggaacctccggtgtcaagaaaataatctacatagcccctttctcaga
aatatacaagttccatacagtgcagcattttgtcttcttcctatagatat
tttacacattgggattatttgcctttgactgtaagagtcccctggggttc
tcttctcttactgtttacaggatctggtttcactcatttcataaatgata
actaacacattttcaacttcttgggacatgtggagaaaaatgtgctgtga
gccaactagaatgtattgcacttctgtttgttctactttgttgagtctcc
catccggcttagtaaagcttccataaatacaataaagcaatcaaagaaaa
ctgttgagagccatttacttaaattgctaaagctgagtgcagtgcttgtc
taaaaaaataagtaaacacccattatccagtccaaagcaggagaagaaaa
cagaagtaggtatataccaaatagagaactctccccaaaataaacttgca
gaggtggggaccatggagtggatacaagtgcctgggttggaaggtctcaa
ttgttgatcctgtttggtgattttaatttattagtgtatgtagaacatag
taagataaataaatctcacttgaagataatatatatatgtgtgtgtgtgt
gtatgtgttgatatatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_104056761_104057774
seq2: B6Ng01-229E21.g_63_1081

seq1  GAATTCTTTGGTGACAGGAAAGATGTAGACATGATATAATTACCTCATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGGTGACAGGAAAGATGTAGACATGATATAATTACCTCATAG  50

seq1  TATCAAAAATAAAAAGTTAAAAAAATGTGAACTTAATGGTACCAGAGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAAAATAAAAAGTTAAAAAAATGTGAACTTAATGGTACCAGAGAAC  100

seq1  ATATTTGTTGCCACATACCCAGCAAAGGATCTGACATGAAACTTAGAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGTTGCCACATACCCAGCAAAGGATCTGACATGAAACTTAGAGGA  150

seq1  TATTAAAGATATCTCTGAGAAAGAGGGGGCTAAGCATTTGGTCCAGGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAGATATCTCTGAGAAAGAGGGGGCTAAGCATTTGGTCCAGGAAA  200

seq1  TGAACAAAGAAAAGGTCCAGTAGCTTGCTTAAACTTTGTACTTTTAGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACAAAGAAAAGGTCCAGTAGCTTGCTTAAACTTTGTACTTTTAGAAA  250

seq1  ATATTTTCTAAGAAAATCCAAATTAATTGAAGGTAGAGGTAGTTGAAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTCTAAGAAAATCCAAATTAATTGAAGGTAGAGGTAGTTGAAAGA  300

seq1  ACACACACACACACACACACACACAAGATATGTGAATCTGTGACCATTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACAAGATATGTGAATCTGTGACCATTAT  350

seq1  TGTGGAACCTCCGGTGTCAAGAAAATAATCTACATAGCCCCTTTCTCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAACCTCCGGTGTCAAGAAAATAATCTACATAGCCCCTTTCTCAGA  400

seq1  AATATACAAGTTCCATACAGTGCAGCATTTTGTCTTCTTCCTATAGATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATACAAGTTCCATACAGTGCAGCATTTTGTCTTCTTCCTATAGATAT  450

seq1  TTTACACATTGGGATTATTTGCCTTTGACTGTAAGAGTCCCCTGGGGTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACACATTGGGATTATTTGCCTTTGACTGTAAGAGTCCCCTGGGGTTC  500

seq1  TCTTCTCTTACTGTTTACAGGATCTGGTTTCACTCATTTCATAAATGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCTTACTGTTTACAGGATCTGGTTTCACTCATTTCATAAATGATA  550

seq1  ACTAACACATTTTCAACTTCTTGGGACATGTGGAGAAAAATGTGCTGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACACATTTTCAACTTCTTGGGACATGTGGAGAAAAATGTGCTGTGA  600

seq1  GCCAACTAGAATGTATTGCACTTCTGTTTGTTCTACTTTGTTGAGTCTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAACTAGAATGTATTGCACTTCTGTTTGTTCTACTTTGTTGAGTCTCC  650

seq1  CATCCGGCTTAGTAAAGCTTCCATAAATACAATAAAGCAATCAAAGAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCGGCTTAGTAAAGCTTCCATAAATACAATAAAGCAATCAAAGAAAA  700

seq1  CTGTTGAGAGCCATTTACTTAAATTGCTAAAGCTGAGTGCAGTGCTTGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGAGAGCCATTTACTTAAATTGCTAAAGCTGAGTGCAGTGCTTGTC  750

seq1  TAAAAAAATAAGTAAACACCCATTATCCAGTCCAAAGCAGGAGAAGAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAATAAGTAAACACCCATTATCCAGTCCAAAGCAGGAGAAGAAAA  800

seq1  CAGAAGTAGGTATATACCAAATAGAGAACTCTCCCCAAAATAAACTTGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTAGGTATATACCAAATAGAGAACTCTCCCCAAAATAAACTTGCA  850

seq1  GAGGTGGGGACCATGGAGTGGATACAAGTGCCT-GGTTGG-AGGTCTCAA  898
      ||||||||||||||||||||||||||||||||| |||||| |||||||||
seq2  GAGGTGGGGACCATGGAGTGGATACAAGTGCCTGGGTTGGAAGGTCTCAA  900

seq1  TTGTTGATCCTGTTTGGTGATTTTAATTTATTAGTGTTATGTAGAACATA  948
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTGTTGATCCTGTTTGGTGATTTTAATTTATTAGTG-TATGTAGAACATA  949

seq1  GTAAGATAAATAAATCTCACTTGAAGATTAAATATATATATGTGTGTGTG  998
      ||||||||||||||||||||||||||||  ||||||||||||||||||||
seq2  GTAAGATAAATAAATCTCACTTGAAGAT--AATATATATATGTGTGTGTG  997

seq1  TGTGTAT------ATATATATA  1014
      |||||||      |||||||||
seq2  TGTGTATGTGTTGATATATATA  1019