BAC Information

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BAC

Clone NameB6Ng01-229F23
Chromosome8 (Build37)
Map Location 111,021,641 - 111,156,696
singlet/doubletdoublet
Overlap genenone
Upstream geneWwp2, Psmd7, LOC100041744, LOC668038
Downstream geneAtbf1, 4922502B01Rik, Gm1943, LOC100042829, Pmfbp1, Dhx38, Txnl4b, Hp, Dhodh, Pkd1l3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-229F23.bB6Ng01-229F23.g
ACCGA042540GA042541
length751487
definitionB6Ng01-229F23.b B6Ng01-229F23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,021,641 - 111,022,390)(111,156,205 - 111,156,696)
sequence
gaattccaaaatgtataataaatacacattttacaaaagcaatatgtgtt
ttaaaatataatatatgcaaacaatcgtataaatcaccaggcttgacacg
agtcagccgaagaggcttctggggaaatggtgttgtgcgtgtgcgtgtgt
ttttaataatgtaaaaatatgtgtaatatgtttgaaaaacaacagccaaa
accccttctacctgccaactttataatacttatttccccagagtctgcta
tatcctagattctcaggaaaataacagggggcttacataaaaagtataaa
tatgaataagatgttaaaaaaaaactccacccatctccatatatatttcc
ccaatggacttgaccagcccaagcatcatatgtcaaaaaaatgtgcattt
tatggccttcatgcaaaggtttctataatgttattgtgtgaggcagagcc
aaagactaccaaggaggagagttccattggatacccattctgacacaccc
cacagagcctggtgctatcacaatgtcttagaggctaaatgttagcccac
attgtacattttatgtcctttgtttgctggcaacatctctagactatttt
gtggttagtagggtgggacagaatgggattcctggcttcttgctctaaat
tttgtaatctcttcatataactccatggagtccatccacttgtgggtatt
gggtcactaaatgttcactgtcttaatctgtgtgtgtgagtgtgtgtgtg
t
tgttgtgaaaccttcccagtcttttgtacttggctttggcagcctgggca
aaggaccccacactgacaatgggagtccctggcctggtgggagcagctac
cagcaacagcatttggtgtaagaagtttgggggtggggaaggttcatttc
cctcagcatctgttttctctgtctactagaccctcctggatcccctcctc
ctggaactcactcacagatgcccattagttggtaggagtctcaagtttta
gctttctaggaagtacctgcattttaatgtagtatttttatctcatgtta
ctttttggtgctgcagatagagcccacagtcttccttgcttaaaatctct
agcccttaatgtgagatttaaagaaattattattattattgtgtatatgt
accacagtaggggtggagaaattaaaaaacactttgttggagtcagaact
catgacattacattttaggcagcaaatgttttccatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_111021641_111022390
seq2: B6Ng01-229F23.b_48_798

seq1  GAATTCCAAAATGTATAATAAATACACATTTTACAAAAGCAATATGTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAATGTATAATAAATACACATTTTACAAAAGCAATATGTGTT  50

seq1  TTAAAATATAATATATGCAAACAATCGTATAAATCACCAGGCTTGACACG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATATAATATATGCAAACAATCGTATAAATCACCAGGCTTGACACG  100

seq1  AGTCAGCCGAAGAGGCTTCTGGGGAAATGGTGTTGTGCGTGTGCGTGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGCCGAAGAGGCTTCTGGGGAAATGGTGTTGTGCGTGTGCGTGTGT  150

seq1  TTTTAATAATGTAAAAATATGTGTAATATGTTTGAAAAACAACAGCCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATAATGTAAAAATATGTGTAATATGTTTGAAAAACAACAGCCAAA  200

seq1  ACCCCTTCTACCTGCCAACTTTATAATACTTATTTCCCCAGAGTCTGCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTTCTACCTGCCAACTTTATAATACTTATTTCCCCAGAGTCTGCTA  250

seq1  TATCCTAGATTCTCAGGAAAATAACAGGGGGCTTACATAAAAAGTATAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTAGATTCTCAGGAAAATAACAGGGGGCTTACATAAAAAGTATAAA  300

seq1  TATGAATAAGATGTTAAAAAAAAACTCCACCCATCTCCATATATATTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATAAGATGTTAAAAAAAAACTCCACCCATCTCCATATATATTTCC  350

seq1  CCAATGGACTTGACCAGCCCAAGCATCATATGTCAAAAAAATGTGCATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGGACTTGACCAGCCCAAGCATCATATGTCAAAAAAATGTGCATTT  400

seq1  TATGGCCTTCATGCAAAGGTTTCTATAATGTTATTGTGTGAGGCAGAGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCCTTCATGCAAAGGTTTCTATAATGTTATTGTGTGAGGCAGAGCC  450

seq1  AAAGACTACCAAGGAGGAGAGTTCCATTGGATACCCATTCTGACACACCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACTACCAAGGAGGAGAGTTCCATTGGATACCCATTCTGACACACCC  500

seq1  CACAGAGCCTGGTGCTATCACAATGTCTTAGAGGCTAAATGTTAGCCCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGCCTGGTGCTATCACAATGTCTTAGAGGCTAAATGTTAGCCCAC  550

seq1  ATTGTACATTTTATGTCCTTTGTTTGCTGGCAACATCTCTAGACTATTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTACATTTTATGTCCTTTGTTTGCTGGCAACATCTCTAGACTATTTT  600

seq1  GTGGTTAGTAGGGTGGGACAGAATGGGATTCCTGGCTTCTTGCTCTAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTAGTAGGGTGGGACAGAATGGGATTCCTGGCTTCTTGCTCTAAAT  650

seq1  TTTGTAATCTCTTCATATAACTCCATGGAGTCCATCCACTTGTGGGTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAATCTCTTCATATAACTCCATGGAGTCCATCCACTTGTGGGTATT  700

seq1  GGGTCACTAAATG-TCACTGTCTTAATCTGTGTGTGTGAGTGTGTGTGTG  749
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GGGTCACTAAATGTTCACTGTCTTAATCTGTGTGTGTGAGTGTGTGTGTG  750

seq1  T  750
      |
seq2  T  751

seq1: chr8_111156205_111156696
seq2: B6Ng01-229F23.g_68_560 (reverse)

seq1  CATGGAAAACATTTGCTGCCT-AAATGTAATGTCATGAGTTCTGACTCCA  49
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CATGGAAAACATTTGCTGCCTAAAATGTAATGTCATGAGTTCTGACTCCA  50

seq1  ACAAAGTGTTTTTTAATTTCTCCACCCCTACTGTGGTACATATACACAAT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGTGTTTTTTAATTTCTCCACCCCTACTGTGGTACATATACACAAT  100

seq1  AATAATAATAATTTCTTTAAATCTCACATTAAGGGCTAGAGATTTTAAGC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAATAATTTCTTTAAATCTCACATTAAGGGCTAGAGATTTTAAGC  150

seq1  AAGGAAGACTGTGGGCTCTATCTGCAGCACCAAAAAGTAACATGAGATAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGACTGTGGGCTCTATCTGCAGCACCAAAAAGTAACATGAGATAA  200

seq1  AAATACTACATTAAAATGCAGGTACTTCCTAGAAAGCTAAAACTTGAGAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTACATTAAAATGCAGGTACTTCCTAGAAAGCTAAAACTTGAGAC  250

seq1  TCCTACCAACTAATGGGCATCTGTGAGTGAGTTCCAGGAGGAGGGGATCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACCAACTAATGGGCATCTGTGAGTGAGTTCCAGGAGGAGGGGATCC  300

seq1  AGGAGGGTCTAGTAGACAGAGAAAACAGATGCTGAGGGAAATGAACCTTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGGTCTAGTAGACAGAGAAAACAGATGCTGAGGGAAATGAACCTTC  350

seq1  CCCACCCCCAAACTTCTTACACCAAATGCTGTTGCTGGTAGCTGCTCCCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCCCCAAACTTCTTACACCAAATGCTGTTGCTGGTAGCTGCTCCCA  400

seq1  CCAGGCCAGGGACTCCCATTGTCAGTGTGGGGTCCTTTGCCCAGGCTGCC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCCAGGGACTCCCATTGTCAGTGTGGGGTCCTTTGCCCAGGCTGCC  450

seq1  AAAGCCAAGTACAAAAGACTGGGAAGGTTTCACAACAGAATTC  492
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCAAGTACAAAAGACTGGGAAGGTTTCACAACAGAATTC  493