BAC Information

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BAC

Clone NameB6Ng01-232A13
Chromosome8 (Build37)
Map Location 104,927,515 - 105,046,590
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneCdh11, EG667618, LOC100041368, 1600027J07Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232A13.bB6Ng01-232A13.g
ACCGA044471GA044472
length990747
definitionB6Ng01-232A13.b B6Ng01-232A13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(104,927,515 - 104,928,056)(105,045,845 - 105,046,590)
sequence
gaattcttttctcctcttccacatctcaatagaaatctgtatttattaat
aagattttagaggagttctctggtggaatttttagggtcacttacatata
ctatcatatcatctgcaaaaagtgatattttgacttcttcctttccaatt
tatatccccttgatctcttttgttgttgaattgctctgggtaggacttca
agtacaatgttgaatagatagggagaaagtgggcagcctggtctagttcc
tgattttagtgggattgtttccagcttctcaccatttactttgatattgg
ctactggtttgctgtagattgcttttatcatgtttaggtatgagccttga
attcctgatctttccaagccttttatcatgaatggatgttggattttgtc
aaatgctttctctgcgtctaacgagatgatcatgtggtttttgtctttga
gtttgtttataaaatggattacattgatggatttcggtatattaaaccat
tcctgcatctctggaataaaacctacttggtcaggatggatgattgtttt
aatgtgttcttggattcggttagcgagaattttattgagtatttttgcat
caatattcataagggaaattggtctgaagttctctatctttgttggatct
ttctgtggtttaagtatcagagtaattgtgacttcatagaatgaattggg
tagagtaccttctgcttctattctgtggaatagtttgtgcagaactgaga
taatatcttctttgaaggtctgatagaactctgcactaaacccatctggt
cctgggcttttattggttgggagactattaatgactgcttctattttctt
taggggatgtgggactgtttagatcattaacttgatcctgatttaacttt
ggtacctggttatctgtctagaaatttgtccatttcatccaggttttcca
gtttgttgagtatagccttttgtataaggataaaattcag

gaattccagtgttcaaactaagacatgtaggcttggtggaaaatgactta
cttcactggtagctgtttttccatatgtcacagttttctagtgggtaaac
atgacagatgaggttaatttaactaaaagaatccttctcattggattttc
ttgggtcaatgtctagtctaagaccgagagcttttgtgatgagttaagta
tttgagtctaatttttgtgctttaaaatatatgtgcccacactatctggc
caatcaagaaaaccactcttgataatacaaactatttgaatttggttaca
gaaacagtggaagaacagacaaatcaaatgtaggttggtgaatagattca
gaaaaacacaagatttcagcaggttttggaagctgttcatatccttagtg
agggagagttaaagagaagaaaataaggatccagaggctataagccgacc
aagtccttctgctggaggctagaattggagggcacacagacctattccca
gagagagtgggcattcagccctattggatagggggttgctgaagcttaat
ctgatacatgtctcacccatcaatcaatgcagaaagaaaacatctttctc
ctttctctctcttgcttgtactttcttttctatccttgttccttcatctc
tcttcctcttttccttcctgccatttcttccattcctgctttgcatctcc
cttcttccctcctccatctttccttttttgttcattcccttcctccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_104927515_104928056
seq2: B6Ng01-232A13.b_48_589

seq1  GAATTCTTTTCTCCTCTTCCACATCTCAATAGAAATCTGTATTTATTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCTCCTCTTCCACATCTCAATAGAAATCTGTATTTATTAAT  50

seq1  AAGATTTTAGAGGAGTTCTCTGGTGGAATTTTTAGGGTCACTTACATATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTTAGAGGAGTTCTCTGGTGGAATTTTTAGGGTCACTTACATATA  100

seq1  CTATCATATCATCTGCAAAAAGTGATATTTTGACTTCTTCCTTTCCAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCATATCATCTGCAAAAAGTGATATTTTGACTTCTTCCTTTCCAATT  150

seq1  TATATCCCCTTGATCTCTTTTGTTGTTGAATTGCTCTGGGTAGGACTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCCCCTTGATCTCTTTTGTTGTTGAATTGCTCTGGGTAGGACTTCA  200

seq1  AGTACAATGTTGAATAGATAGGGAGAAAGTGGGCAGCCTGGTCTAGTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAATGTTGAATAGATAGGGAGAAAGTGGGCAGCCTGGTCTAGTTCC  250

seq1  TGATTTTAGTGGGATTGTTTCCAGCTTCTCACCATTTACTTTGATATTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTAGTGGGATTGTTTCCAGCTTCTCACCATTTACTTTGATATTGG  300

seq1  CTACTGGTTTGCTGTAGATTGCTTTTATCATGTTTAGGTATGAGCCTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGGTTTGCTGTAGATTGCTTTTATCATGTTTAGGTATGAGCCTTGA  350

seq1  ATTCCTGATCTTTCCAAGCCTTTTATCATGAATGGATGTTGGATTTTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTGATCTTTCCAAGCCTTTTATCATGAATGGATGTTGGATTTTGTC  400

seq1  AAATGCTTTCTCTGCGTCTAACGAGATGATCATGTGGTTTTTGTCTTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTTTCTCTGCGTCTAACGAGATGATCATGTGGTTTTTGTCTTTGA  450

seq1  GTTTGTTTATAAAATGGATTACATTGATGGATTTCGGTATATTAAACCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTATAAAATGGATTACATTGATGGATTTCGGTATATTAAACCAT  500

seq1  TCCTGCATCTCTGGAATAAAACCTACTTGGTCAGGATGGATG  542
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCATCTCTGGAATAAAACCTACTTGGTCAGGATGGATG  542


seq1: chr8_105045845_105046590
seq2: B6Ng01-232A13.g_69_815 (reverse)

seq1  GGGAGGAA-GGAATGAACAAAAAAGGAAAGATGGAGGAGGGAAGAAGGGA  49
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGAAGGGAATGAACAAAAAAGGAAAGATGGAGGAGGGAAGAAGGGA  50

seq1  GATGCAAAGCAGGAATGGAAGAAATGGCAGGAAGGAAAAGAGGAAGAGAG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAAAGCAGGAATGGAAGAAATGGCAGGAAGGAAAAGAGGAAGAGAG  100

seq1  ATGAAGGAACAAGGATAGAAAAGAAAGTACAAGCAAGAGAGAGAAAGGAG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGGAACAAGGATAGAAAAGAAAGTACAAGCAAGAGAGAGAAAGGAG  150

seq1  AAAGATGTTTTCTTTCTGCATTGATTGATGGGTGAGACATGTATCAGATT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGTTTTCTTTCTGCATTGATTGATGGGTGAGACATGTATCAGATT  200

seq1  AAGCTTCAGCAACCCCCTATCCAATAGGGCTGAATGCCCACTCTCTCTGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTCAGCAACCCCCTATCCAATAGGGCTGAATGCCCACTCTCTCTGG  250

seq1  GAATAGGTCTGTGTGCCCTCCAATTCTAGCCTCCAGCAGAAGGACTTGGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGGTCTGTGTGCCCTCCAATTCTAGCCTCCAGCAGAAGGACTTGGT  300

seq1  CGGCTTATAGCCTCTGGATCCTTATTTTCTTCTCTTTAACTCTCCCTCAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTTATAGCCTCTGGATCCTTATTTTCTTCTCTTTAACTCTCCCTCAC  350

seq1  TAAGGATATGAACAGCTTCCAAAACCTGCTGAAATCTTGTGTTTTTCTGA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGATATGAACAGCTTCCAAAACCTGCTGAAATCTTGTGTTTTTCTGA  400

seq1  ATCTATTCACCAACCTACATTTGATTTGTCTGTTCTTCCACTGTTTCTGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATTCACCAACCTACATTTGATTTGTCTGTTCTTCCACTGTTTCTGT  450

seq1  AACCAAATTCAAATAGTTTGTATTATCAAGAGTGGTTTTCTTGATTGGCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAATTCAAATAGTTTGTATTATCAAGAGTGGTTTTCTTGATTGGCC  500

seq1  AGATAGTGTGGGCACATATATTTTAAAGCACAAAAATTAGACTCAAATAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGTGTGGGCACATATATTTTAAAGCACAAAAATTAGACTCAAATAC  550

seq1  TTAACTCATCACAAAAGCTCTCGGTCTTAGACTAGACATTGACCCAAGAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTCATCACAAAAGCTCTCGGTCTTAGACTAGACATTGACCCAAGAA  600

seq1  AATCCAATGAGAAGGATTCTTTTAGTTAAATTAACCTCATCTGTCATGTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAATGAGAAGGATTCTTTTAGTTAAATTAACCTCATCTGTCATGTT  650

seq1  TACCCACTAGAAAACTGTGACATATGGAAAAACAGCTACCAGTGAAGTAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCACTAGAAAACTGTGACATATGGAAAAACAGCTACCAGTGAAGTAA  700

seq1  GTCATTTTCCACCAAGCCTACATGTCTTAGTTTGAACACTGGAATTC  746
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTTTCCACCAAGCCTACATGTCTTAGTTTGAACACTGGAATTC  747


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