BAC Information

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BAC

Clone NameB6Ng01-232C01
Chromosome8 (Build37)
Map Location 78,536,755 - 78,537,704
singlet/doubletsinglet
Overlap genenone
Upstream geneHmgb2l1, Tom1, LOC100039134, Hmox1, Mcm5, Rasd2, LOC675507, LOC384845, LOC666211, LOC100039229, 1700007B14Rik, LOC666036
Downstream geneLOC100039185, EG631594, LOC666226, LOC100039211, LOC384847, Nr3c2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232C01.bB6Ng01-232C01.g
ACCGA044541GA044542
length9501,100
definitionB6Ng01-232C01.b B6Ng01-232C01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaagtaaaatgcatttctggatactggaatatgacatttaggaa
tgggaataggctaaataaaagtctaaaaggttcccaagagggagtagaga
gaaaagcagaatgttcaaccaggatttacttatttttgtctcctttaaat
ggagggagacagtgtagagagggtctgctgtagcactggagatgtgactg
gaatattttttctaaaaaaaaccaggaaatgtatgacagcctcagtacct
ccctggcaggagtggtctgtgtttagcagagggtgcctgctaaagtttgg
gtgatagaattaagcagaaacttgaaagaagaagattaggaggttaaagc
ctatgagttgagttgtgctttctttactgcaatgaaaatacatttttttc
ttcttttcttcattgttatatattcaattaagtatttcccatagaaaaag
cagcatattataaaatatttgtttaatataatatatcacttatgataata
ctacatctggacatctcaaaatgactttgtgttcctccatgaatgttaac
tgtaagatgaaaatcccctaacaatttccacttcagacttttgttgtctc
cagtaaagaagctgaatatgcataatgaatgcacagtgacttgcactaga
cacttttaacaaggagagatgatatgattccaggtcaccttcttttttag
tcactatatttctagctatttattttcccgttaagaaggtgtacctcagc
gctccctgggactaaaccaccaatcaaagaaaacacatagtgggactcat
ggttctagctgcgtatgtaacagaggatggcctaagttggtcatcaatgg
gaggagagacctttggtcctgtgtatgttctatgtcacagtataggggaa
tgccaggccagcaagcatgagtgggtgtgttggtgagcagggaaagtggg

gaattcctgatctttccaagacttttatcatgaatgggtgttggattttg
ttaaatgctttctctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggatttccgtatattaaacc
atccctgcatctctggaataaaacctacttgaacaggatgtatgattgct
ttaatgtgttcttgtattcgattagtgagaatatttttgagtatttttgc
atcgatattcataagggaaattagtctgaagccctctaactttgttggat
ctttctatggtttaggtatcagagtaattgtggcttcatagagtgagttg
ggtagagtaccttctccttctattttgtggaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactcttcactaaacccatcag
gtcctgggctttttttgcctgggagactattaatgagtgcttctatttct
ttaggggatatggaactgtttagattgttaacttgatcctgatttaactt
tggtacctggtatctgtctagaaattggtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtggaaggatctgttggtgttttggatt
tcttcaggatctgttgatatgtctcccttttcatttctgattttgttaat
taggatgctgtccctgtgccttctagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcttttggttaattctttga
atagttcttcttgtttccacttgggttgatttcacccctgagtttgatta
tttcctgccgttactcctcttgggtgaatttgcttcctttttttctagag
catttagatgtgttgtcaagctgctagtgtgtgctctctctagtttcttt
ttggaggcactcagagctatgagtttccttctttagaaaagttttccatt
gtgtccataggtttggtatgttgtagcttcattttcataactctcaaagt
cttgattctttgtctattctttccttggacaggtaatcattgaagagagt

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_78536755_78537704
seq2: B6Ng01-232C01.b_45_994 (reverse)

seq1  CCCACTTCCCCTGCTCACCAACACACCCACTCCTGCTTGCTGGCCCGGCA  50
      ||||||| |||||||||||||||||||||||| |||||||||||| ||||
seq2  CCCACTTTCCCTGCTCACCAACACACCCACTCATGCTTGCTGGCCTGGCA  50

seq1  TTCCCCTATACTGTGACATAGAACATACACAGGACCAAAGGTCTCTCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTATACTGTGACATAGAACATACACAGGACCAAAGGTCTCTCCTC  100

seq1  CCATTGATGACCAACTTAGGCCATCCTCTGTTACATACGCAGCTAGAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGATGACCAACTTAGGCCATCCTCTGTTACATACGCAGCTAGAACC  150

seq1  ATGAGTCCCACTATGTGTTTTCTTTGATTGGTGGTTTAGTCCCAGGGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTCCCACTATGTGTTTTCTTTGATTGGTGGTTTAGTCCCAGGGAGC  200

seq1  GCTGAGGTACACCTTCTTAACGGGAAAATAAATAGCTAGAAATATAGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGGTACACCTTCTTAACGGGAAAATAAATAGCTAGAAATATAGTGA  250

seq1  CTAAAAAAGAAGGTGACCTGGAATCATATCATCTCTCCTTGTTAAAAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAAAGAAGGTGACCTGGAATCATATCATCTCTCCTTGTTAAAAGTG  300

seq1  TCTAGTGCAAGTCACTGTGCATTCATTATGCATATTCAGCTTCTTTACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTGCAAGTCACTGTGCATTCATTATGCATATTCAGCTTCTTTACTG  350

seq1  GAGACAACAAAAGTCTGAAGTGGAAATTGTTAGGGGATTTTCATCTTACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAACAAAAGTCTGAAGTGGAAATTGTTAGGGGATTTTCATCTTACA  400

seq1  GTTAACATTCATGGAGGAACACAAAGTCATTTTGAGATGTCCAGATGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAACATTCATGGAGGAACACAAAGTCATTTTGAGATGTCCAGATGTAG  450

seq1  TATTATCATAAGTGATATATTATATTAAACAAATATTTTATAATATGCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATCATAAGTGATATATTATATTAAACAAATATTTTATAATATGCTG  500

seq1  CTTTTTCTATGGGAAATACTTAATTGAATATATAACAATGAAGAAAAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCTATGGGAAATACTTAATTGAATATATAACAATGAAGAAAAGAA  550

seq1  GAAAAAAATGTATTTTCATTGCAGTAAAGAAAGCACAACTCAACTCATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAATGTATTTTCATTGCAGTAAAGAAAGCACAACTCAACTCATAG  600

seq1  GCTTTAACCTCCTAATCTTCTTCTTTCAAGTTTCTGCTTAATTCTATCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAACCTCCTAATCTTCTTCTTTCAAGTTTCTGCTTAATTCTATCAC  650

seq1  CCAAACTTTAGCAGGCACCCTCTGCTAAACACAGACCACTCCTGCCAGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACTTTAGCAGGCACCCTCTGCTAAACACAGACCACTCCTGCCAGGG  700

seq1  AGGTACTGAGGCTGTCATACATTTCCTGGTTTTTTTTAGAAAAAATATTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACTGAGGCTGTCATACATTTCCTGGTTTTTTTTAGAAAAAATATTC  750

seq1  CAGTCACATCTCCAGTGCTACAGCAGACCCTCTCTACACTGTCTCCCTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCACATCTCCAGTGCTACAGCAGACCCTCTCTACACTGTCTCCCTCC  800

seq1  ATTTAAAGGAGACAAAAATAAGTAAATCCTGGTTGAACATTCTGCTTTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAGGAGACAAAAATAAGTAAATCCTGGTTGAACATTCTGCTTTTC  850

seq1  TCTCTACTCCCTCTTGGGAACCTTTTAGACTTTTATTTAGCCTATTCCCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTACTCCCTCTTGGGAACCTTTTAGACTTTTATTTAGCCTATTCCCA  900

seq1  TTCCTAAATGTCATATTCCAGTATCCAGAAATGCATTTTACTTGGAATTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAAATGTCATATTCCAGTATCCAGAAATGCATTTTACTTGGAATTC  950