BAC Information

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BAC

Clone NameB6Ng01-233F12
Chromosome8 (Build37)
Map Location 34,214,898 - 34,358,573
singlet/doubletdoublet
Overlap geneEG628412, Wrn
Upstream geneEG666589, EG546052, LOC100042715, LOC628408
Downstream genePurg, LOC666630, Hmgb1-rs17, Tex15, Ppp2cb, Ubxd6, Gsr, Gtf2e2, Rbpms, LOC100042769, Dctn6, LOC100042777, Mboat4, Leprotl1, LOC666694, Tmem66
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-233F12.bB6Ng01-233F12.g
ACCGA045430GA045431
length1,154951
definitionB6Ng01-233F12.b B6Ng01-233F12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(34,214,898 - 34,216,042)(34,357,811 - 34,358,573)
sequence
gaattctacaaggtattttctataaaaaggaatgataaagtcttttcttt
gaagggaccgtttgttgattcaaaaatttgttatttataacaaaatgatt
atgcaaaacatgcacccactaagatgagtttaaacagttgccaatatgtg
aagtttttaaaagagcagtgtttataataaatgtgactttctactgtctt
agaacaaaatgtcactaaatcagtatttctaaatgatcaagacatagtgt
tgtaaagttctatagtgttaaaagaattactcagagtaagacaaatttag
agtctattttgcagttaatctctaataaatataatttatcaaatagatag
acaatatcaaagagaaatagctacaagtatgtgaaaagtataaattcttt
tttgatttgcaggcaaaatgatatatgtctgtagtccctgtagaaggctg
gaacagaaatgtcacttaaccctaaaaactgagatccaagccaggcagga
tagtgagacactgtctctgaggggatgggtggaagcagagacagataaaa
agaaataaaacataaatatgtcaagtagtacatacatttggtctttggta
gtgtcctgaatttcttgaaagccacacattaactatataaagtcaccttc
ttattaatttatcttgtcctttttggtatgttccagttcttttgcctgtc
ttcaaactcagatactctgtctttcttgaagaagagtgaagaggcatcat
acagaatgctagaaaatctttttcaactggtcaagattatactaaaaaaa
tgaaaaacctaaacaagaaataactcaatcaaaaaaaataaaataaaaat
aaaaataaaaataaacccaagctgtcttagggttttactactgtgagaag
actccacgaccaaagcaactcttattaggacaacatttaatcgggggctg
gcttacagggtcaggagggttcattccattatcatccaaggcaggagcat
ggcagtgtcccagccagacttgggggcttgaaggagctgagatccacttc
ttgttcccaagggcagatcagagaagtactggcttcaggcatctagaatg
agggtcttaaagcccaggccacacaatgacactacttcttccaacaagga
ccac
gaattctttttcttacttgaacttttttcccatgtggaaacaactcaagt
tgtccctcccccaagaatctgtaaaatgataaaacaccagaattactcag
taagagtcttcctcaaatacaatctggttatcatttgattttctgtacat
atctgtgtatagagaaagcatgtctagacatgctaatttaagacttggaa
tgatatttgcacacttacaattataagctaatgaattgatagttttggga
actcagtcaatgtgggtctgctaaggttaaatttaagtttctacattttg
agacccaagggccagatcttgggctttgtggtaaaatgtccagagtaact
cacttagaatcgtcttgtgagacaatcagtctcctagaagcagtagccag
tctattagacttgaaggcagaaggggcagagcagatttactgttcaggat
tagattcaaggtgtatcaacctttgtctcttgcaaaatgacacatcattt
taggggaagctaaaaactggaatttcatttagaaatgcattgtctcttag
gactcaaatacatgccttttaaaaattttttatttatatatatatattta
tttatttattggtttttttgagacagggtttatctgtgtagccctgactg
tcctggaactcactctgtagaccaggctggccttgaactcagaaatctgc
ctgcctctgcctccctggtgctgggattaaaggcgtgcgccaccactgcc
cagctacatgctttgataagatggttgggcaatgttatgcagcattgttt
ccttaaaaaaaataaaaaaaatatcatgtttgctgctgattggctgaaac
catgaactgatggacaaacaggtagtctagacaggtagatgcaaagactt
gggcaggagacacactggtgagccagtctttgcttctgacagctcatgat
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_34214898_34216042
seq2: B6Ng01-233F12.b_50_1203

seq1  GAATTCTACAAGGTATTTTCTATAAAAAGGAATGATAAAGTCTTTTCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACAAGGTATTTTCTATAAAAAGGAATGATAAAGTCTTTTCTTT  50

seq1  GAAGGGACCGTTTGTTGATTCAAAAATTTGTTATTTATAACAAAATGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGACCGTTTGTTGATTCAAAAATTTGTTATTTATAACAAAATGATT  100

seq1  ATGCAAAACATGCACCCACTAAGATGAGTTTAAACAGTTGCCAATATGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAAACATGCACCCACTAAGATGAGTTTAAACAGTTGCCAATATGTG  150

seq1  AAGTTTTTAAAAGAGCAGTGTTTATAATAAATGTGACTTTCTACTGTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTTTAAAAGAGCAGTGTTTATAATAAATGTGACTTTCTACTGTCTT  200

seq1  AGAACAAAATGTCACTAAATCAGTATTTCTAAATGATCAAGACATAGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAAAATGTCACTAAATCAGTATTTCTAAATGATCAAGACATAGTGT  250

seq1  TGTAAAGTTCTATAGTGTTAAAAGAATTACTCAGAGTAAGACAAATTTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAGTTCTATAGTGTTAAAAGAATTACTCAGAGTAAGACAAATTTAG  300

seq1  AGTCTATTTTGCAGTTAATCTCTAATAAATATAATTTATCAAATAGATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTATTTTGCAGTTAATCTCTAATAAATATAATTTATCAAATAGATAG  350

seq1  ACAATATCAAAGAGAAATAGCTACAAGTATGTGAAAAGTATAAATTCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATATCAAAGAGAAATAGCTACAAGTATGTGAAAAGTATAAATTCTTT  400

seq1  TTTGATTTGCAGGCAAAATGATATATGTCTGTAGTCCCTGTAGAAGGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTTGCAGGCAAAATGATATATGTCTGTAGTCCCTGTAGAAGGCTG  450

seq1  GAACAGAAATGTCACTTAACCCTAAAAACTGAGATCCAAGCCAGGCAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGAAATGTCACTTAACCCTAAAAACTGAGATCCAAGCCAGGCAGGA  500

seq1  TAGTGAGACACTGTCTCTGAGGGGATGGGTGGAAGCAGAGACAGATAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGAGACACTGTCTCTGAGGGGATGGGTGGAAGCAGAGACAGATAAAA  550

seq1  AGAAATAAAACATAAATATGTCAAGTAGTACATACATTTGGTCTTTGGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATAAAACATAAATATGTCAAGTAGTACATACATTTGGTCTTTGGTA  600

seq1  GTGTCCTGAATTTCTTGAAAGCCACACATTAACTATATAAAGTCACCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCTGAATTTCTTGAAAGCCACACATTAACTATATAAAGTCACCTTC  650

seq1  TTATTAATTTATCTTGTCCTTTTTGGTATGTTCCAGTTCTTTTGCCTGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAATTTATCTTGTCCTTTTTGGTATGTTCCAGTTCTTTTGCCTGTC  700

seq1  TTCAAACTCAGATACTCTGTC-TTCTTGAAGAAGAGTGAAGAGGCATCAT  749
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTCAAACTCAGATACTCTGTCTTTCTTGAAGAAGAGTGAAGAGGCATCAT  750

seq1  ACAGAATGCTAGAAAATCTTTTTCAACTGGTCAAGATTATACT-AAAAAA  798
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ACAGAATGCTAGAAAATCTTTTTCAACTGGTCAAGATTATACTAAAAAAA  800

seq1  TGAAAAACCTAAACAAGAAAATAACTCAATCAAAAAAAAATAAAATAAAA  848
      ||||||||||||||||| ||||||||||||| ||||||||||||||||||
seq2  TGAAAAACCTAAACAAG-AAATAACTCAATC-AAAAAAAATAAAATAAAA  848

seq1  ATAAAAATAAAAATAAACCCAAGCTGTCTTAGGGTTTTACTACTGTGAGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAATAAAAATAAACCCAAGCTGTCTTAGGGTTTTACTACTGTGAGA  898

seq1  AGACTCCACGACCAAAGCAACTCTTATAAGGACAACATTTAATC-GGGGC  947
      ||||||||||||||||||||||||||| |||||||||||||||| |||||
seq2  AGACTCCACGACCAAAGCAACTCTTATTAGGACAACATTTAATCGGGGGC  948

seq1  TGGCTTACAGGGTCAG--AGGTTCAATCCAATATCAT-CAAGGCAGGAGC  994
      ||||||||||||||||   |||||| |||| |||||| ||||||||||||
seq2  TGGCTTACAGGGTCAGGAGGGTTCATTCCATTATCATCCAAGGCAGGAGC  998

seq1  ATGGCAGTGTCCAAG-CAGACTTGGGG--CTGAAGGAGCTGAGATCCACT  1041
      |||||||||||| || |||||||||||   ||||||||||||||||||||
seq2  ATGGCAGTGTCCCAGCCAGACTTGGGGGCTTGAAGGAGCTGAGATCCACT  1048

seq1  TCTTGTT-CCAAGGGCAGACCAGAGAAG-ACTGGCTTCAAGGCAACTAGG  1089
      ||||||| ||||||||||| |||||||| ||||||||| ||||| |||| 
seq2  TCTTGTTCCCAAGGGCAGATCAGAGAAGTACTGGCTTC-AGGCATCTAGA  1097

seq1  ATGAGGGTCTTAAAGCCCAGGCCCACACAATGACAC-ACTTCTTCCAACA  1138
      ||||||||||||||||||||| |||||||||||||| |||||||||||||
seq2  ATGAGGGTCTTAAAGCCCAGG-CCACACAATGACACTACTTCTTCCAACA  1146

seq1  AGG-CCAC  1145
      ||| ||||
seq2  AGGACCAC  1154

seq1: chr8_34357811_34358573
seq2: B6Ng01-233F12.g_69_831 (reverse)

seq1  AAGCATGTAGCTGGGCAGTGGTGGCGCACGCCTTTAATCCCAGCACCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATGTAGCTGGGCAGTGGTGGCGCACGCCTTTAATCCCAGCACCAGG  50

seq1  GAGGCAGAGGCAGGCAGATTTCTGAGTTCAAGGCCAGCCTGGTCTACAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGAGGCAGGCAGATTTCTGAGTTCAAGGCCAGCCTGGTCTACAGA  100

seq1  GTGAGTTCCAGGACAGTCAGGGCTACACAGATAAACCCTGTCTCAAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTTCCAGGACAGTCAGGGCTACACAGATAAACCCTGTCTCAAAAAA  150

seq1  ACCAATAAATAAATAAATATATATATATAAATAAAAAATTTTTAAAAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATAAATAAATAAATATATATATATAAATAAAAAATTTTTAAAAGGC  200

seq1  ATGTATTTGAGTCCTAAGAGACAATGCATTTCTAAATGAAATTCCAGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATTTGAGTCCTAAGAGACAATGCATTTCTAAATGAAATTCCAGTTT  250

seq1  TTAGCTTCCCCTAAAATGATGTGTCATTTTGCAAGAGACAAAGGTTGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTTCCCCTAAAATGATGTGTCATTTTGCAAGAGACAAAGGTTGATA  300

seq1  CACCTTGAATCTAATCCTGAACAGTAAATCTGCTCTGCCCCTTCTGCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTGAATCTAATCCTGAACAGTAAATCTGCTCTGCCCCTTCTGCCTT  350

seq1  CAAGTCTAATAGACTGGCTACTGCTTCTAGGAGACTGATTGTCTCACAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCTAATAGACTGGCTACTGCTTCTAGGAGACTGATTGTCTCACAAG  400

seq1  ACGATTCTAAGTGAGTTACTCTGGACATTTTACCACAAAGCCCAAGATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGATTCTAAGTGAGTTACTCTGGACATTTTACCACAAAGCCCAAGATCT  450

seq1  GGCCCTTGGGTCTCAAAATGTAGAAACTTAAATTTAACCTTAGCAGACCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTTGGGTCTCAAAATGTAGAAACTTAAATTTAACCTTAGCAGACCC  500

seq1  ACATTGACTGAGTTCCCAAAACTATCAATTCATTAGCTTATAATTGTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGACTGAGTTCCCAAAACTATCAATTCATTAGCTTATAATTGTAAG  550

seq1  TGTGCAAATATCATTCCAAGTCTTAAATTAGCATGTCTAGACATGCTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAAATATCATTCCAAGTCTTAAATTAGCATGTCTAGACATGCTTTC  600

seq1  TCTATACACAGATATGTACAGAAAATCAAATGATAACCAGATTGTATTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATACACAGATATGTACAGAAAATCAAATGATAACCAGATTGTATTTG  650

seq1  AGGAAGACTCTTACTGAGTAATTCTGGTGTTTTATCATTTTACAGATTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGACTCTTACTGAGTAATTCTGGTGTTTTATCATTTTACAGATTCT  700

seq1  TGGGGGAGGGACAACTTGAGTTGTTTCCACATGGGAAAAAAGTTCAAGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGAGGGACAACTTGAGTTGTTTCCACATGGGAAAAAAGTTCAAGTA  750

seq1  AGAAAAAGAATTC  763
      |||||||||||||
seq2  AGAAAAAGAATTC  763