BAC Information

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BAC

Clone NameB6Ng01-233I07
Chromosome8 (Build37)
Map Location 52,658,491 - 52,659,366
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039966, LOC667517
Downstream geneLOC623872, LOC100040220, LOC623935, 1190028D05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-233I07.bB6Ng01-233I07.g
ACCGA045554GA045555
length1,196875
definitionB6Ng01-233I07.b B6Ng01-233I07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatcctggagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttagaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcacgggagatctttccatctt
ctgagatcttccttaatttctttcttcagagatttgaagtttttatcaaa
cagatctttcacttccttagttagagtcacgccaagatattttatattat
ttgtgactatgagaaggtgtgttccctaatttctttctcagcctgtttat
tctttgtatagaagaaaggccattgacttgtttgagtttatttttatatt
caagcgtactttcaccgaagctgtttatcaggcttaggagtttctctggt
gaaagttttaatcactttatatataccatcctatccatctgcgaagagga
tcgactcccgttccatgatcctgaatctcctttgtgtgccgaatgc
gaattcatacgtttgtattagtggaaaactaaatctatatatcagggctg
acatttcttaaaattacttttgttatttttccttaggtttctacatacac
ttaatctttagatatactccactatttctcgtttcctaggagacagtatc
aaagaatgtgtgctgaatttgtttcagctgtactttaagagtctgttgaa
aataacgtataatatttctccttgtatttgttaatgtaatatcacagggc
agatccctgaggacacaggttttggaatagtgatttgcatatagagtatt
tggaaggaaatggtctcagcttctaaacctgtagagaggagagtgtaagt
agaagaatttgagcagtagcagtgactaaaaaggctttagctttctcttg
ggaatctataaggctttaatgccttatagtgttttctttaactgagacaa
aggtgacacaagataacttttttttttccaaaagaaacatggataaataa
tgtgtcttgccaattgcagttgccagattggaagatgtctgtatcagcca
tcaacacttctaccaactacttacatgaatatctcagtatggggtgctgg
atgtaggtgaatcgttgcagtataaaatctattaagaaaaattatcaata
tagttgattcaccagtattcactgccttataaataggattaaaatcttca
aatccccaatcagtgatgctatagtatcatttttacaaacaattactaaa
ataaattttgttatactttgagttggatgttaccttatgttggacaatgg
atataagtaaatgtaactctgtgtgcgtgcatgcgtgcgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_52658491_52659366
seq2: B6Ng01-233I07.g_71_945

seq1  GAATTCATACGTTTGTATTAGTGGAAAACTAAATCTATATATCAGGGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATACGTTTGTATTAGTGGAAAACTAAATCTATATATCAGGGCTG  50

seq1  ACATTTCTTAAAATTACTTTTGTTATTTTTCCTTAGGTTTCTACATACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCTTAAAATTACTTTTGTTATTTTTCCTTAGGTTTCTACATACAC  100

seq1  TTAATCTTTAGATATACTCCACTATTTCTCGTTTCCTAGGAGACAGTATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCTTTAGATATACTCCACTATTTCTCGTTTCCTAGGAGACAGTATC  150

seq1  AAAGAATGTGTGCTGAATTTGTTTCAGCTGTACTTTAAGAGTCTGTTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATGTGTGCTGAATTTGTTTCAGCTGTACTTTAAGAGTCTGTTGAA  200

seq1  AATAACGTATAATATTTCTCCTTGTATTTGTTAATGTAATATCACAGGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACGTATAATATTTCTCCTTGTATTTGTTAATGTAATATCACAGGGC  250

seq1  AGATCCCTGAGGACACAGGTTTTGGAATAGTGATTTGCATATAGAGTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCCTGAGGACACAGGTTTTGGAATAGTGATTTGCATATAGAGTATT  300

seq1  TGGAAGGAAATGGTCTCAGCTTCTAAACCTGTAGAGAGGAGAGTGTAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGGAAATGGTCTCAGCTTCTAAACCTGTAGAGAGGAGAGTGTAAGT  350

seq1  AGAAGAATTTGAGCAGTAGCAGTGACTAAAAAGGCTTTAGCTTTCTCTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAATTTGAGCAGTAGCAGTGACTAAAAAGGCTTTAGCTTTCTCTTG  400

seq1  GGAATCTATAAGGCTTTAATGCCTTATAGTGTTTTCTTTAACTGAGACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCTATAAGGCTTTAATGCCTTATAGTGTTTTCTTTAACTGAGACAA  450

seq1  AGGTGACACAAGATAACTTTTTTTTTTCCAAAAGAAACATGGATAAATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGACACAAGATAACTTTTTTTTTTCCAAAAGAAACATGGATAAATAA  500

seq1  TGTGTCTTGCCAATTGCAGTTGCCAGATTGGAAGATGTCTGTATCAGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTTGCCAATTGCAGTTGCCAGATTGGAAGATGTCTGTATCAGCCA  550

seq1  TCAACACTTCTACCAACTACTTACATGAATATCTCAGTATGGGGTGCTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACACTTCTACCAACTACTTACATGAATATCTCAGTATGGGGTGCTGG  600

seq1  ATGTAGGTGAATCGTTGCAGTATAAAATCTATTAAGAAAAATTATCAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGGTGAATCGTTGCAGTATAAAATCTATTAAGAAAAATTATCAATA  650

seq1  TAGTTGATTCACCAGTATTCACTGCCTTATAAATAGGATTAAAATCTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGATTCACCAGTATTCACTGCCTTATAAATAGGATTAAAATCTTCA  700

seq1  AATCCCCAATCAGTGATGCTATAGTATCATTTTTACAAACAATTACTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCCAATCAGTGATGCTATAGTATCATTTTTACAAACAATTACTAAA  750

seq1  ATAAATTTTGTTATACTTTGAGTTGGATGTTACCTTATGTTGGACAAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ATAAATTTTGTTATACTTTGAGTTGGATGTTACCTTATGTTGGAC-AATG  799

seq1  GATATAAGTAAATGTAACTCTGTGTGCGTGCATGCGTGCGTGTGTGTGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAAGTAAATGTAACTCTGTGTGCGTGCATGCGTGCGTGTGTGTGTG  849

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTG  876
      ||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTG  875