BAC Information

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BAC

Clone NameB6Ng01-237A10
Chromosome8 (Build37)
Map Location 91,369,541 - 91,497,673
singlet/doubletdoublet
Overlap genenone
Upstream geneZfp423, LOC100040328, 5033428A16Rik, Heatr3, Papd5, Adcy7, Brd7, LOC100040369, Nkd1, 9130017C17Rik, Nod2, Cyld, LOC675985
Downstream geneSall1, LOC100041089, EG625801, EG384862
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-237A10.bB6Ng01-237A10.g
ACCGA048095GA048096
length9531,121
definitionB6Ng01-237A10.b B6Ng01-237A10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,496,729 - 91,497,673)(91,369,541 - 91,370,666)
sequence
gaattcacttattcagagtaattggatgctgacttgggttaatacgtaca
atgtccttaaatgaaaatgttctattgtaaggggaactgtatgatacctg
aggctttctcaataggtttggtcggactctcagttaattatactgcatgc
tattttttgaatgaattcaagcatgaattctacacgctagagattgggat
aattatattcaattctgcccggtgccccgctggaagaattgaccttttag
ataaaacgagtctcctgaacaagaaacctgtagaaaagtcgacacaaagc
ggcagatgcaagagcagagtcttgagctaggcggggtgggggcggggagg
gaggctggcccaaggaacagtggcatcagcaagattgatttttttgtcac
aagaaagtatttctgttttgcagcttgttttgaatccttcgtacataaag
gtataatttaaaaccattgattttactaagctgttttctcatcagtaaca
tggctaaaaaagtagcagcacggaagaatgaggagccaacaaaaagcaat
cctgggaggatggctgggtgtggggcccggggaacagggcagatacagag
gtcagctcctctctgctcaaggggccaggctgcctctcttgcatggctgt
gaccgacgctgaggggcactaagagggcagactgcctgggtctgaagcca
actcttctgcttcctggccctgaggcctacagctaggtaaaccacgtgcc
tcagtttcctcttctgctaatgggtatggactacatacgactgtgaggat
taagcagaagcactttgcccaatacagcgaaggcctcttgtttaatgggt
ggcctctcgggttctagattgattactcatttaacagggactgaagtcct
tagaaggggaccaggtacccagcttcagagaggaagacagcctcctgctg
tgt
gaattctgtgttgtatggactgtcttgtgccttgccagctctttatcaga
ttcactgacctatgtcacagggtgccaatagcacaccctcccttgtcttg
agcaccaaagatgtccccttttaggggtgtgaacaaacttacccttgatg
actgagaactgttgctttggagtgtgagagtcctaaagggaaggtctggg
ctctgcatatccagtaaggccaggatggcgttcagtaagtaatacatgca
ctgaatgtggcagacatcatcactacagggagaataatatgcataggagc
caaaatgatccccacatctgcaggatctggagctacagcttggaaacgca
caggatcaggtgtaaggtcacatccggcttacagcagtacgagattctcc
cagccagagtgtcttccgagagcctgaaggcccgagaggggagactgtaa
gcaccctgacaggctgtcagcttttaatgcaaaactggaggaaaagtttg
cagccacaccacgcacaggctgaaggagataaatcacagttactcgcagc
tggctgacagcagtttaagccactgcaatcactaggctccgagggggaag
ctccttttatcttactaaatgcaaaaagtagagctgaaattggcaatatc
tcggccctctcagcggccgggctttttacataaatatcagcaagcggtaa
gtaaattctgttgacgaaatgtaataaaacaaagactgtttcgaatatga
ccattccccgatgcattctgcggccccgtcccacttacttattgctcgct
gctgagattataaggtttgcttttatctgtcagaaatcaatatttcaaac
atcggataaaagaggaaattgaactgggaataggctgaagtgctgtaaaa
aactacaaagcacaattatcaaaaagcactttaaagtgctttataggaca
tacatataaaaatgctcaattatgtcaggagccataatgagaacttttcc
tatgctttcttccctccacagtgtaatttgacgctggcagttccatcaat
atgcttttcatttctacgatgcctgaggactctgagctctgcatctgtta
gaaatgacccaattacaatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_91496729_91497673
seq2: B6Ng01-237A10.b_49_1001 (reverse)

seq1  ACACAGCA-GAGGCTGTCTTCCTCTCTGAAGCTGGGTACCTGGTCCCCTT  49
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGCAGGAGGCTGTCTTCCTCTCTGAAGCTGGGTACCTGGTCCCCTT  50

seq1  CTAAGGACTTCAGT-CCTGTT-AATGAGTTATCAATCTAGAA-CCGAGAG  96
      |||||||||||||| |||||| ||||||| |||||||||||| |||||||
seq2  CTAAGGACTTCAGTCCCTGTTAAATGAGTAATCAATCTAGAACCCGAGAG  100

seq1  GCCA-CCATTAA--CAGAGGCCTTCGCTGTATTGGGCAAAGTGCTTCTGC  143
      |||| |||||||   |||||||||||||||||||||||||||||||||||
seq2  GCCACCCATTAAACAAGAGGCCTTCGCTGTATTGGGCAAAGTGCTTCTGC  150

seq1  TTAATCCTCACAGTCGTATGTAGTCCATACCCATTAGCAGAAGAGGAAAC  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCCTCACAGTCGTATGTAGTCCATACCCATTAGCAGAAGAGGAAAC  200

seq1  TGAGGCACGTGG-TTACCTAGCTGTAGGCCTCAGGGCCAGGAAGCAGAAG  242
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TGAGGCACGTGGTTTACCTAGCTGTAGGCCTCAGGGCCAGGAAGCAGAAG  250

seq1  AGTTGGCTTCAGACCCAGGCAGTCTGCCCTCTTAGTGCCCCTCAGCGTCG  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGCTTCAGACCCAGGCAGTCTGCCCTCTTAGTGCCCCTCAGCGTCG  300

seq1  GTCACAGCCATGCAAGAGAGGCAGCCTGGCCCCTTGAGCAGAGAGGAGCT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAGCCATGCAAGAGAGGCAGCCTGGCCCCTTGAGCAGAGAGGAGCT  350

seq1  GACCTCTGTATCTGCCCTGTTCCCCGGGCCCCACACCCAGCCATCCTCCC  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCTGTATCTGCCCTGTTCCCCGGGCCCCACACCCAGCCATCCTCCC  400

seq1  AGGATTGCTTTTTGTTGGCTCCTCATTCTTCCGTGCTGCTACTTTTTTAG  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTGCTTTTTGTTGGCTCCTCATTCTTCCGTGCTGCTACTTTTTTAG  450

seq1  CCATGTTACTGATGAGAAAACAGCTTAGTAAAATCAATGGTTTTAAATTA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTTACTGATGAGAAAACAGCTTAGTAAAATCAATGGTTTTAAATTA  500

seq1  TACCTTTATGTACGAAGGATTCAAAACAAGCTGCAAAACAGAAATACTTT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTTATGTACGAAGGATTCAAAACAAGCTGCAAAACAGAAATACTTT  550

seq1  CTTGTGACAAAAAAATCAATCTTGCTGATGCCACTGTTCCTTGGGCCAGC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGACAAAAAAATCAATCTTGCTGATGCCACTGTTCCTTGGGCCAGC  600

seq1  CTCCCTCCCCGCCCCCACCCCGCCTAGCTCAAGACTCTGCTCTTGCATCT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTCCCCGCCCCCACCCCGCCTAGCTCAAGACTCTGCTCTTGCATCT  650

seq1  GCCGCTTTGTGTCGACTTTTCTACAGGTTTCTTGTTCAGGAGACTCGTTT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGCTTTGTGTCGACTTTTCTACAGGTTTCTTGTTCAGGAGACTCGTTT  700

seq1  TATCTAAAAGGTCAATTCTTCCAGCGGGGCACCGGGCAGAATTGAATATA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAAAAGGTCAATTCTTCCAGCGGGGCACCGGGCAGAATTGAATATA  750

seq1  ATTATCCCAATCTCTAGCGTGTAGAATTCATGCTTGAATTCATTCAAAAA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCCCAATCTCTAGCGTGTAGAATTCATGCTTGAATTCATTCAAAAA  800

seq1  ATAGCATGCAGTATAATTAACTGAGAGTCCGACCAAACCTATTGAGAAAG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCATGCAGTATAATTAACTGAGAGTCCGACCAAACCTATTGAGAAAG  850

seq1  CCTCAGGTATCATACAGTTCCCCTTACAATAGAACATTTTCATTTAAGGA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGGTATCATACAGTTCCCCTTACAATAGAACATTTTCATTTAAGGA  900

seq1  CATTGTACGTATTAACCCAAGTCAGCATCCAATTACTCTGAATAAGTGAA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTACGTATTAACCCAAGTCAGCATCCAATTACTCTGAATAAGTGAA  950

seq1  TTC  945
      |||
seq2  TTC  953

seq1: chr8_91369541_91370666
seq2: B6Ng01-237A10.g_65_1185

seq1  GAATTCTGTGTTGTATGGACTGTCTTGTGCCTTGCCAGCTCTTTATCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGTTGTATGGACTGTCTTGTGCCTTGCCAGCTCTTTATCAGA  50

seq1  TTCACTGACCTATGTCACAGGGTGCCAATAGCACACCCTCCCTTGTCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTGACCTATGTCACAGGGTGCCAATAGCACACCCTCCCTTGTCTTG  100

seq1  AGCACCAAAGATGTCCCCTTTTAGGGGTGTGAACAAACTTACCCTTGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCAAAGATGTCCCCTTTTAGGGGTGTGAACAAACTTACCCTTGATG  150

seq1  ACTGAGAACTGTTGCTTTGGAGTGTGAGAGTCCTAAAGGGAAGGTCTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGAACTGTTGCTTTGGAGTGTGAGAGTCCTAAAGGGAAGGTCTGGG  200

seq1  CTCTGCATATCCAGTAAGGCCAGGATGGCGTTCAGTAAGTAATACATGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCATATCCAGTAAGGCCAGGATGGCGTTCAGTAAGTAATACATGCA  250

seq1  CTGAATGTGGCAGACATCATCACTACAGGGAGAATAATATGCATAGGAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATGTGGCAGACATCATCACTACAGGGAGAATAATATGCATAGGAGC  300

seq1  CAAAATGATCCCCACATCTGCAGGATCTGGAGCTACAGCTTGGAAACGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGATCCCCACATCTGCAGGATCTGGAGCTACAGCTTGGAAACGCA  350

seq1  CAGGATCAGGTGTAAGGTCACATCCGGCTTACAGCAGTACGAGATTCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATCAGGTGTAAGGTCACATCCGGCTTACAGCAGTACGAGATTCTCC  400

seq1  CAGCCAGAGTGTCTTCCGAGAGCCTGAAGGCCCGAGAGGGGAGACTGTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAGAGTGTCTTCCGAGAGCCTGAAGGCCCGAGAGGGGAGACTGTAA  450

seq1  GCACCCTGACAGGCTGTCAGCTTTTAATGCAAAACTGGAGGAAAAGTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCCTGACAGGCTGTCAGCTTTTAATGCAAAACTGGAGGAAAAGTTTG  500

seq1  CAGCCACACCACGCACAGGCTGAAGGAGATAAATCACAGTTACTCGCAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCACACCACGCACAGGCTGAAGGAGATAAATCACAGTTACTCGCAGC  550

seq1  TGGCTGACAGCAGTTTAAGCCACTGCAATCACTAGGCTCCGAGGGGGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGACAGCAGTTTAAGCCACTGCAATCACTAGGCTCCGAGGGGGAAG  600

seq1  CTCCTTTTATCTTACTAAATGCAAAAAGTAGAGCTGAAATTGGCAATATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTTATCTTACTAAATGCAAAAAGTAGAGCTGAAATTGGCAATATC  650

seq1  TCGGCCCTCTCAGCGGCCGGGCTTTTTACATAAATATCAGCAAGCGGTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGCCCTCTCAGCGGCCGGGCTTTTTACATAAATATCAGCAAGCGGTAA  700

seq1  GTAAATTCTGTTGACGAAATGTAATAAAACAAAGACTGTTTCGAATATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATTCTGTTGACGAAATGTAATAAAACAAAGACTGTTTCGAATATGA  750

seq1  CCATTCCCCGATGCATTCTGCGGCCCCGTCCCACTTACTTATTGCTCGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCCCCGATGCATTCTGCGGCCCCGTCCCACTTACTTATTGCTCGCT  800

seq1  GCTGAGATTATAAGGTTTGCTTTTATCTGTCAGAAATCAATATTTCAAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGATTATAAGGTTTGCTTTTATCTGTCAGAAATCAATATTTCAAAC  850

seq1  ATCGGATAAAAGAGGAAATTGAACTGGGAATAGGCTGAAGTGCTGTAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGGATAAAAGAGGAAATTGAACTGGGAATAGGCTGAAGTGCTGTAAAA  900

seq1  AACTACAAAGCACAATTATCAAAAAGCAC-TTAAAGTGCTTAATAGGACA  949
      ||||||||||||||||||||||||||||| ||||||||||| ||||||||
seq2  AACTACAAAGCACAATTATCAAAAAGCACTTTAAAGTGCTTTATAGGACA  950

seq1  TACATATAAAAATGCTCAAATTAATGTCAGGGAGCCATAATGAGAACTTT  999
      |||||||||||||||||||  | |||||| ||||||||||||||||||||
seq2  TACATATAAAAATGCTCAA--TTATGTCA-GGAGCCATAATGAGAACTTT  997

seq1  TCCTATGCTTTTCTTCCCT-CACAGTGTAATTTGAAGGCTGGCCAGTCCA  1048
      |||||||| |||||||||| |||||||||||||| | ||||||   ||||
seq2  TCCTATGC-TTTCTTCCCTCCACAGTGTAATTTG-ACGCTGGCAGTTCCA  1045

seq1  TCAATATGCTTTTCAATTTCTACGATGCCCTGAGGACTCTGAGCTCTGCA  1098
      |||||||||||||| |||||||||||| ||||||||||||||||||||||
seq2  TCAATATGCTTTTC-ATTTCTACGATG-CCTGAGGACTCTGAGCTCTGCA  1093

seq1  TCTGTTAGAAATGAACC-ATTACATATGA  1126
      |||||||||||||| || |||||| ||||
seq2  TCTGTTAGAAATGACCCAATTACA-ATGA  1121