BAC Information

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BAC

Clone NameB6Ng01-237A14
Chromosome8 (Build37)
Map Location 4,701,304 - 4,702,066
singlet/doubletsinglet
Overlap genenone
Upstream geneClec4g, Cd209a, LOC664870, Cd209e, Cd209d, Cd209b, Cd209c, LOC664888, EG384770, EG664905, LOC664915, LOC664922, LOC631071, Cd209f, Cd209g, B130050I23Rik, BC068157, Lrrc8e, Map2k7, LOC100039590, Snapc2, Ctxn1, Timm44, Elavl1, Ccl25, LOC664977, Ppia-ps8_36.1, Lass4, Vmn2r-ps89, EG633533, BC003267, LOC665021, EG623133, EG665044, EG623223
Downstream geneLOC100040234, Shcbp1, EG622568, LOC669393, EG631359, LOC100039687, LOC436026, Slc10a2, LOC434275, LOC623409, LOC669429
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-237A14.bB6Ng01-237A14.g
ACCGA048103GA048104
length9361,175
definitionB6Ng01-237A14.b B6Ng01-237A14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatctcaaatgccggagaagcacttaaagaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaatcaggtgacagca
gatgctggcgaggatgtggagaaagagggacactcctccattactggtgg
gattgcaagttggtacagctactctggaaatcagtctggcggttcctcag
aaaattggacatagtactacctgaggacccagctataccattcctgggca
tatacccagaagatgttccaacttgtaataaggacacataatccactatg
ctcatagcagccttacttataatagctaaaagctggaaagacccagatgt
ccctcaacagaggaacggatacagaaaatgtggtatcttctactctcagc
tgacagcatatgctggcgaagatgtggcaaaagagaaacgctcctccatt
tctggtgggattgcaagctggtacaaccactcaggaaatcagtctgacac
tattgctgatgccaaattcttggtgactggaccctgatacagctgtcttc
tgagaggctctgccagagctgaatcaatacagatgtagatgttcacagct
gaacattggactgagcgcagggaccccaatggggaagtttgggcaaagac
tgtaggagctgaaggggtttacaacctcacaggatgaacaatgatatcaa
ccaactagatcactcaaagctcccaggtactaaactaccaaccaaaaagt
atacaggggatacccatggctcccactggataagtagcagagaattgcct
tatctggcaccactggaaaggcttgatgacccaagataggggaatgctag
gctgctgaggcaggagtgagtggggtgggaggggca
gaattctttatttctccctagctagggcatactactgataaccaccttct
acaagattccttcaaaggctctttgctttccttagagcttcctgccattt
ttcttttatcctagaaaaatgtctccagcagtcccattccttcttgtggg
gttgtgtttgagctactgtgcatagttatttattcttactaatgcaacta
caaaatgtttgtagcagtgcagtcctctcaggtcacctttcttggggaaa
gatgccattgttgtttttgcaacaaatgacagactcccaagctgatgcta
tcagtacagcttgttaaccttgagaacagcttagacgatgtatgacacct
tttttaaactaattttttaacactgacattttaaataacttaaagtgcac
agacactcgacagaggcctgtaccagcctaaggggaacagttctggggtg
gaacacagtgttggatgaaggctaaacaactgaataatctctggccttat
aatcttatcagttgtgctttaataaactctggtctcttacactctatctt
tcatattatttatgcttaaatataaatgaggattccttgcgaatagtata
tgctatttagcagtggggaattaagtaaaggattaattgctagtgttcct
ttctctggcaaaccagccagaagtcccttactgcccaggcaagaggctcg
gagcttattaactcttattgaaccagagagaaaagaaaaggaaagaaaga
agtcacacaaacaacacaaacacacacaccagatgaagctggaaatggct
acaccatcattttttaaaaattactttcagctttttatagcttttagaca
aaatgttctctgtgtaagaaagaattgtctcataggaaaaaaaatgttac
aaagaaaggaaaagaattaaaatcctttacacatgcaaatatacacagat
gcacacacattcatacacacacattcggcttggcctgaacacctgtttca
tctactctacaagtgtcgtgtataactacacacagacaccaaacatacat
ataatatattcggtggatgagtctgagcccaatgccatacacaatacatt
tgaagagaatggaatggattcagagagtccccaggccaccacgtaatcta
gtctctggccttttattatatcaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_4701304_4702066
seq2: B6Ng01-237A14.g_480_1242 (reverse)

seq1  TTTG-TATATAAAAAGGCCAGAGAATAGAAATAACGTGGTGGCTTGGGG-  48
      |||| ||||  ||||||||||||| |||  || |||||||||| ||||| 
seq2  TTTGATATAATAAAAGGCCAGAGACTAG--ATTACGTGGTGGCCTGGGGA  48

seq1  GGCTCTGA--CCCATCCA-TCTCTTCAAATGTA-TGTGTATGGCATTTGG  94
        ||||||  ||  |||| |||||||||||||| |||||||||||||  |
seq2  CTCTCTGAATCCATTCCATTCTCTTCAAATGTATTGTGTATGGCATT--G  96

seq1  GGCTCAGACTCATCCACCGAATATA-TATATGTATGTTTGGGTGTCTGTG  143
      ||||||||||||||||||||||||| ||||||||||||| ||||||||||
seq2  GGCTCAGACTCATCCACCGAATATATTATATGTATGTTT-GGTGTCTGTG  145

seq1  TGTAGTTATACACGAACACTTGTAGAGTAGATGAAACAGGTGTTCAGGCC  193
      |||||||||||||| ||||||||||||||||||||||||||||||||| |
seq2  TGTAGTTATACACG-ACACTTGTAGAGTAGATGAAACAGGTGTTCAGG-C  193

seq1  CAAGCCGAATGTGTGTGTATGAATGTGTGTGCATCTGTGTATATTTGCAT  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCGAATGTGTGTGTATGAATGTGTGTGCATCTGTGTATATTTGCAT  243

seq1  GTGTAAAGGATTTTAATTCTTTTCCTTTCTTTGTAACATTTTTTTTCCTA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAAAGGATTTTAATTCTTTTCCTTTCTTTGTAACATTTTTTTTCCTA  293

seq1  TGAGACAATTCTTTCTTACACAGAGAACATTTTGTCTAAAAGCTATAAAA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACAATTCTTTCTTACACAGAGAACATTTTGTCTAAAAGCTATAAAA  343

seq1  AGCTGAAAGTAATTTTTAAAAAATGATGGTGTAGCCATTTCCAGCTTCAT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAAAGTAATTTTTAAAAAATGATGGTGTAGCCATTTCCAGCTTCAT  393

seq1  CTGGTGTGTGTGTTTGTGTTGTTTGTGTGACTTCTTTCTTTCCTTTTCTT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGTGTGTGTTTGTGTTGTTTGTGTGACTTCTTTCTTTCCTTTTCTT  443

seq1  TTCTCTCTGGTTCAATAAGAGTTAATAAGCTCCGAGCCTCTTGCCTGGGC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCTGGTTCAATAAGAGTTAATAAGCTCCGAGCCTCTTGCCTGGGC  493

seq1  AGTAAGGGACTTCTGGCTGGTTTGCCAGAGAAAGGAACACTAGCAATTAA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGGGACTTCTGGCTGGTTTGCCAGAGAAAGGAACACTAGCAATTAA  543

seq1  TCCTTTACTTAATTCCCCACTGCTAAATAGCATATACTATTCGCAAGGAA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTACTTAATTCCCCACTGCTAAATAGCATATACTATTCGCAAGGAA  593

seq1  TCCTCATTTATATTTAAGCATAAATAATATGAAAGATAGAGTGTAAGAGA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCATTTATATTTAAGCATAAATAATATGAAAGATAGAGTGTAAGAGA  643

seq1  CCAGAGTTTATTAAAGCACAACTGATAAGATTATAAGGCCAGAGATTATT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGTTTATTAAAGCACAACTGATAAGATTATAAGGCCAGAGATTATT  693

seq1  CAGTTGTTTAGCCTTCATCCAACACTGTGTTCCACCCCAGAACTGTTCCC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGTTTAGCCTTCATCCAACACTGTGTTCCACCCCAGAACTGTTCCC  743

seq1  CTTAGGCTGGTACAGGCCTC  763
      ||||||||||||||||||||
seq2  CTTAGGCTGGTACAGGCCTC  763