BAC Information

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BAC

Clone NameB6Ng01-237P02
Chromosome8 (Build37)
Map Location 37,412,103 - 37,618,491
singlet/doubletdoublet
Overlap geneEG544878, 6430573F11Rik
Upstream genePpp1r3b, Thex1, Mfhas1, LOC100041572, Gm501, Cldn23, LOC671641, D8Ertd82e, Lonrf1
Downstream geneDlc1, LOC100042892, A730069N07Rik, AI429214, LOC666877, LOC100041616, 1700016D18Rik, LOC641121, LOC621149, Sgcz
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-237P02.bB6Ng01-237P02.g
ACCGA048769GA048770
length6761,135
definitionB6Ng01-237P02.b B6Ng01-237P02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,617,820 - 37,618,491)(37,412,103 - 37,413,247)
sequence
gaattccaggacagacagggctccacagaaaaaccctgtcttgaaaaaca
ctgagacagagacagagacagagacagcttgaggacataaattggggtga
gtcagaaaggacttcaggtacacagctctgcagaaaggctcaggagaacc
acgagtttttgttcttacaaatgtgggaattgctggaatatttttgtggg
gtggtggataggagctttgacagccttccaggatgaaatcacctctggcc
ttctctgtagaaataaaggtctcacttgttcctggctagggtggaccaca
ctgtttcctgaaaaaaaaaaaaaatcttggccatgcctacacatccagcc
ctcctcgtccacacagcctactatggctaagtcgcccctcagtgagtagc
acaaaacacggtctgtcttgagggctgagcgaggaggagtctcccaagag
acctcctttcagaatctcagtccgttttcctttcctgctgcttcggcttt
ccttctttggatatagccagatgtcagaaaaaagtaaacgctgagatgct
taatgacttaggttctaaatgaaggaagactcaaacacttttttcatcag
agatgctaggagagcagggtcagggagcagctgctttatgcatttggtct
gttatgcagagaacaagcccccagat
gaattctataagacagagctgatgactagttatttggttatgcctcaaag
catcgtgaaacaatgaaaagaattgaagcactctgagttaaactccggat
atcatagatgttacacaagccccttttcacggatccatgtgcccagactt
attttcactattaaaatttaaaatgagatcttgcttggttgcccaggctg
tccttgaacctgcaaccctcaaggctcctgctccagcctccagtatagct
attctcacagcttggtaccgtcatgattcttgctcttcatttatgcgttc
tcttgagaaccaggcaggaatcacgtgtgtgcttagcattcagttatcca
gatcccagctccctccctctccatccttttaatgaaggtcttcactcttg
aaacagagaggttgtttcatttcaaactccctgtcattttttcaaaattc
agacctttctctggagttttaactatccgtgtcaagaccatcttccttta
tactctgaaccaaagtaaaaatattgctctagcaggatcttagcttagag
cgcactcaagctaatccacaagcaaaacaagcaaaaggatctccgtctac
agcaagctcctcaggaagccaccttgtaactgggccccaggtttctcctg
acggttgggaggcttcagtgtccacattgtatggctgagatgtcctctac
gcagccatctctgtaggtcatctgtgctgtgagaaggggtctcctggacc
tccagctggaatcaccaaacgtggcattgccaggagtgacactacttatt
tgttagctcacttgatgctaaataaaaaggaccacttgacccttgaatta
gggggtccgaggatgatagaaagacaagagctgtggggctgtgagtcctt
cagagcctctcaagttgcaaccagtttcttatattgagtaattaacctag
catcgttaaactgatatgatgagctctagtcaaagacaggagaaagctac
agttattgacccccatactacatacattacgaccgacgatatacctctga
tggttgtaatgctgccaatggagtagcactattaaggaggtgtgccttgt
tggaatagtgtgtgaccctgtgggggtgtggaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_37617820_37618491
seq2: B6Ng01-237P02.b_46_721 (reverse)

seq1  ATCTGGGGGCTTGTTCTCTGCATAACAGACCAAATGCAT-AAGCAGCTGC  49
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ATCTGGGGGCTTGTTCTCTGCATAACAGACCAAATGCATAAAGCAGCTGC  50

seq1  TCCCTGACCCTGCTCTCCTAGCATCTCTGATG-AAAATGTG-TTGAGTCT  97
      |||||||||||||||||||||||||||||||| |||| ||| ||||||||
seq2  TCCCTGACCCTGCTCTCCTAGCATCTCTGATGAAAAAAGTGTTTGAGTCT  100

seq1  TCCTTCATTTAGAACCTAAGTCATTAAGCATCTCAGCGTTTACTTTTTTC  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCATTTAGAACCTAAGTCATTAAGCATCTCAGCGTTTACTTTTTTC  150

seq1  TGACATCTGGCTATATCCAAAGAAGG-AAGCCGAAGCAGCAGGAAAGGAA  196
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TGACATCTGGCTATATCCAAAGAAGGAAAGCCGAAGCAGCAGGAAAGGAA  200

seq1  AACGGACTGAGATTCTGAAAGGAGGTCTCTTGGGAGACTCCTCCTCGCTC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGGACTGAGATTCTGAAAGGAGGTCTCTTGGGAGACTCCTCCTCGCTC  250

seq1  AGCCCTCAAGACAGACCGTGTTTTGTGCTACTCACTGAGGGGCGACTTAG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTCAAGACAGACCGTGTTTTGTGCTACTCACTGAGGGGCGACTTAG  300

seq1  CCATAGTAGGCTGTGTGGACGAGGAGGGCTGGATGTGTAGGCATGGCCAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGTAGGCTGTGTGGACGAGGAGGGCTGGATGTGTAGGCATGGCCAA  350

seq1  GATTTTTTTTTTTTTTCAGGAAACAGTGTGGTCCACCCTAGCCAGGAACA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTTTTTTTTTTCAGGAAACAGTGTGGTCCACCCTAGCCAGGAACA  400

seq1  AGTGAGACCTTTATTTCTACAGAGAAGGCCAGAGGTGATTTCATCCTGGA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGACCTTTATTTCTACAGAGAAGGCCAGAGGTGATTTCATCCTGGA  450

seq1  AGGCTGTCAAAGCTCCTATCCACCACCCCACAAAAATATTCCAGCAATTC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGTCAAAGCTCCTATCCACCACCCCACAAAAATATTCCAGCAATTC  500

seq1  CCACATTTGTAAGAACAAAAACTCGTGGTTCTCCTGAGCCTTTCTGCAGA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATTTGTAAGAACAAAAACTCGTGGTTCTCCTGAGCCTTTCTGCAGA  550

seq1  GCTGTGTACCTGAAGTCCTTTCTGACTCACCCCAATTTATGTCCTCAAGC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGTACCTGAAGTCCTTTCTGACTCACCCCAATTTATGTCCTCAAGC  600

seq1  TGTCTCTGTCTCTGTCTCTGTCTCAGTGTTTTTCAAGACAGGGTTTTTCT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTGTCTCTGTCTCTGTCTCAGTGTTTTTCAAGACAGGGTTTTTCT  650

seq1  GTGGAGCCCTGTCTGTCCTGGAATTC  672
      ||||||||||||||||||||||||||
seq2  GTGGAGCCCTGTCTGTCCTGGAATTC  676

seq1: chr8_37412103_37413247
seq2: B6Ng01-237P02.g_69_1203

seq1  GAATTCTATAAGACAGAGCTGATGACTAGTTATTTGGTTATGCCTCAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATAAGACAGAGCTGATGACTAGTTATTTGGTTATGCCTCAAAG  50

seq1  CATCGTGAAACAATGAAAAGAATTGAAGCACTCTGAGTTAAACTCCGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCGTGAAACAATGAAAAGAATTGAAGCACTCTGAGTTAAACTCCGGAT  100

seq1  ATCATAGATGTTACACAAGCCCCTTTTCACGGATCCATGTGCCCAGACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAGATGTTACACAAGCCCCTTTTCACGGATCCATGTGCCCAGACTT  150

seq1  ATTTTCACTATTAAAATTTAAAATGAGATCTTGCTTGGTTGCCCAGGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCACTATTAAAATTTAAAATGAGATCTTGCTTGGTTGCCCAGGCTG  200

seq1  TCCTTGAACCTGCAACCCTCAAGGCTCCTGCTCCAGCCTCCAGTATAGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGAACCTGCAACCCTCAAGGCTCCTGCTCCAGCCTCCAGTATAGCT  250

seq1  ATTCTCACAGCTTGGTACCGTCATGATTCTTGCTCTTCATTTATGCGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCACAGCTTGGTACCGTCATGATTCTTGCTCTTCATTTATGCGTTC  300

seq1  TCTTGAGAACCAGGCAGGAATCACGTGTGTGCTTAGCATTCAGTTATCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAGAACCAGGCAGGAATCACGTGTGTGCTTAGCATTCAGTTATCCA  350

seq1  GATCCCAGCTCCCTCCCTCTCCATCCTTTTAATGAAGGTCTTCACTCTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCCAGCTCCCTCCCTCTCCATCCTTTTAATGAAGGTCTTCACTCTTG  400

seq1  AAACAGAGAGGTTGTTTCATTTCAAACTCCCTGTCATTTTTTCAAAATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAGAGGTTGTTTCATTTCAAACTCCCTGTCATTTTTTCAAAATTC  450

seq1  AGACCTTTCTCTGGAGTTTTAACTATCCGTGTCAAGACCATCTTCCTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTTTCTCTGGAGTTTTAACTATCCGTGTCAAGACCATCTTCCTTTA  500

seq1  TACTCTGAACCAAAGTAAAAATATTGCTCTAGCAGGATCTTAGCTTAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTGAACCAAAGTAAAAATATTGCTCTAGCAGGATCTTAGCTTAGAG  550

seq1  CGCACTCAAGCTAATCCACAAGCAAAACAAGCAAAAGGATCTCCGTCTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCACTCAAGCTAATCCACAAGCAAAACAAGCAAAAGGATCTCCGTCTAC  600

seq1  AGCAAGCTCCTCAGGAAGCCACCTTGTAACTGGGCCCCAGG-TTCTCCTG  649
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AGCAAGCTCCTCAGGAAGCCACCTTGTAACTGGGCCCCAGGTTTCTCCTG  650

seq1  ACGG-TGGGAGGCTTCAGTGTCCACATTGTATGGCTGAGATGTCCTCTAC  698
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTTGGGAGGCTTCAGTGTCCACATTGTATGGCTGAGATGTCCTCTAC  700

seq1  GCAGCCATCTCTGTAGGTCATCTGTGCTGTGAGAAGGGGTCTCCTGGACC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCATCTCTGTAGGTCATCTGTGCTGTGAGAAGGGGTCTCCTGGACC  750

seq1  TCCAGCTGGAATCACCAAACGTGGCATTGCCAGGAGTGACACTACTTATT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCTGGAATCACCAAACGTGGCATTGCCAGGAGTGACACTACTTATT  800

seq1  TGTTAGCTCACTTGATGCTAAAATAAAAAGGACCAC-TGACCC-TGAAAT  846
      ||||||||||||||||||| |||||||||||||||| |||||| |||| |
seq2  TGTTAGCTCACTTGATGCT-AAATAAAAAGGACCACTTGACCCTTGAATT  849

seq1  AGGGGGTCCGAGGATGATAGAAAAGACAAGGAGGCTGTGGGGGCTGTGAG  896
      |||||||||||||||||||| |||||||||   ||||| |||||||||||
seq2  AGGGGGTCCGAGGATGATAG-AAAGACAAG--AGCTGT-GGGGCTGTGAG  895

seq1  TCCTTCAGAGCCTCTCAAGTTGCAACCAGTTTCTTATAATTGAGTAATTA  946
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TCCTTCAGAGCCTCTCAAGTTGCAACCAGTTTCTTAT-ATTGAGTAATTA  944

seq1  ACTTAGCATCGTAAAATTGATATGAATGAAGCTCTAGTTAAAAGAACAGG  996
      || ||||||||| ||| ||||||| ||| ||||||||| |||   |||||
seq2  ACCTAGCATCGTTAAACTGATATG-ATG-AGCTCTAGTCAAA--GACAGG  990

seq1  AAGAAAAGCTACAGTTAATTACACACATACATACATACATACAGACAGAC  1046
      |   ||||||||||||| | || | ||||| |||||||||   ||| |||
seq2  A--GAAAGCTACAGTTATTGACCCCCATAC-TACATACATTACGACCGAC  1037

seq1  AGATATA-CTCTGATGGTTTGTACATGCTTGGCCCAGGGAGTAGCACTAT  1095
       |||||| ||||||||| ||||| |||||  ||| | |||||||||||||
seq2  -GATATACCTCTGATGG-TTGTA-ATGCT--GCCAATGGAGTAGCACTAT  1082

seq1  T-AGGAGGTGTGGCCTTGTTGGAGTAG-GTGTGTCACTGT--GGGTGTGG  1141
      | ||||||||| ||||||||||| ||| ||||| | ||||  ||||||||
seq2  TAAGGAGGTGT-GCCTTGTTGGAATAGTGTGTGACCCTGTGGGGGTGTGG  1131

seq1  ATTT  1145
      | ||
seq2  AATT  1135