BAC Information

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BAC

Clone NameB6Ng01-238E10
Chromosome8 (Build37)
Map Location 70,473,677 - 70,626,738
singlet/doubletdoublet
Overlap genePsd3
Upstream geneLOC665453, Nat1, Nat2, LOC100041265, Nat3
Downstream geneSh2d4a, LOC665510, 4732435N03Rik, Ints10, Lpl, LOC100041138, Slc18a1, Atp6v1b2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-238E10.bB6Ng01-238E10.g
ACCGA049014GA049015
length4591,007
definitionB6Ng01-238E10.b B6Ng01-238E10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,626,274 - 70,626,738)(70,473,677 - 70,474,681)
sequence
aatcccccctttggacaacaggaatagtagcacatgaagtattgatcagc
tttgttgtggaagcatgtcacactaccaagatctatcaatacattagtgt
caacctacataggaaactggatggttacagatgtaagaaaatagtagcct
tatggatagaactgtggatagccacctattgatatatggttggtactgaa
agcaaaacatctctactcatatccctagagctacttctgaaattttaagt
tggttcacagtattttttaaacttttctttcagttccctgaaagcacata
ctcgttaaattccagaactcccaaaaggtactctttaactccttaagctg
atgttattcacaagtaagaaagaaggaagggaagaagaaaggaaggaagg
aaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaa
ggaaggaaa
gaattcagagtctaagagcaccacgctatggataatcgcctcagacagca
acgtggctccaccagggaaagtcttcatgtgccccaacacctccatgcag
tgagtaccctcctcatttctgtcagccttactaataagatagaaaagcat
tttaagtttttccccaagattgtcctataatggtttatatttgaaattaa
gcattttcaaacccaaggaattttctatgactacatttgtacataatcca
gactgcctcagaccagggatcagacaaacacactcaacccaaattcctgt
tacctctgtcagcaaacagcctgccccatgaggctgtcaggaatacgaag
agaactcccctgctccatctgctcagcaaactttcatcgtccgtacgggc
tcttttaatgcacttctaacgctgcttctgtgtgaatacacaccgctaca
cactgactggacagtgacattctctcagaatgccactgtatccccttggg
ggctgcctgtgggataagaacttgaaagaagtggaaggagtcctgcccct
cttcccagccttccttctaaccaagcagcttccctccaacagacctactt
caaaagtccagacccagtgaagtcacacatgacctcataaacctcccact
taactgtttaaaagccagagcagagctggtaaccgggagagacagcagat
tcctcagcagaattggggtagttgccgtttaaggaggggaagtgttcctt
caacaccattctaaaataagttgcttgaacacagtcttttataacagccc
cgaggtttttaaagtactgtgttaaaaagacacaattcctaatagctcac
ttattctgactgaactagcctacaaaacaaacttagttcctttatttgac
aactagttaaaggcatgtttgatacctactgcagtggctggtgttttttc
tattttcattctgacttggtttctgttcttttctgtatttgccctgtgaa
aaatatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_70626274_70626738
seq2: B6Ng01-238E10.b_45_509 (reverse)

seq1  TTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCT  50

seq1  TCCTTCCTTCCTTCCTTCCTTTCTTCTTCCCTTCCTTCTTTCTTACTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCTTCCTTCCTTCCTTTCTTCTTCCCTTCCTTCTTTCTTACTTGT  100

seq1  GAATAACATCAGCTTAAGGAGTTAAAGAGTACCTTTTGGGAGTTCTGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAACATCAGCTTAAGGAGTTAAAGAGTACCTTTTGGGAGTTCTGGAA  150

seq1  TTTAACGAGTATGTGCTTTCAGGGAACTGAAAGAAAAGTTTAAAAAATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACGAGTATGTGCTTTCAGGGAACTGAAAGAAAAGTTTAAAAAATAC  200

seq1  TGTGAACCAACTTAAAATTTCAGAAGTAGCTCTAGGGATATGAGTAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAACCAACTTAAAATTTCAGAAGTAGCTCTAGGGATATGAGTAGAGA  250

seq1  TGTTTTGCTTTCAGTACCAACCATATATCAATAGGTGGCTATCCACAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGCTTTCAGTACCAACCATATATCAATAGGTGGCTATCCACAGTT  300

seq1  CTATCCATAAGGCTACTATTTTCTTACATCTGTAACCATCCAGTTTCCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCATAAGGCTACTATTTTCTTACATCTGTAACCATCCAGTTTCCTA  350

seq1  TGTAGGTTGACACTAATGTATTGATAGATCTTGGTAGTGTGACATGCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGTTGACACTAATGTATTGATAGATCTTGGTAGTGTGACATGCTTC  400

seq1  CACAACAAAGCTGATCAATACTTCATGTGCTACTATTCCTGTTGTCCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACAAAGCTGATCAATACTTCATGTGCTACTATTCCTGTTGTCCAAA  450

seq1  GGGGGGATTGAATTC  465
      |||||||||||||||
seq2  GGGGGGATTGAATTC  465

seq1: chr8_70473677_70474681
seq2: B6Ng01-238E10.g_65_1071

seq1  GAATTCAGAGTCTAAGAGCACCACGCTATGGATAATCGCCTCAGACAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGTCTAAGAGCACCACGCTATGGATAATCGCCTCAGACAGCA  50

seq1  ACGTGGCTCCACCAGGGAAAGTCTTCATGTGCCCCAACACCTCCATGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGGCTCCACCAGGGAAAGTCTTCATGTGCCCCAACACCTCCATGCAG  100

seq1  TGAGTACCCTCCTCATTTCTGTCAGCCTTACTAATAAGATAGAAAAGCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTACCCTCCTCATTTCTGTCAGCCTTACTAATAAGATAGAAAAGCAT  150

seq1  TTTAAGTTTTTCCCCAAGATTGTCCTATAATGGTTTATATTTGAAATTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGTTTTTCCCCAAGATTGTCCTATAATGGTTTATATTTGAAATTAA  200

seq1  GCATTTTCAAACCCAAGGAATTTTCTATGACTACATTTGTACATAATCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTTCAAACCCAAGGAATTTTCTATGACTACATTTGTACATAATCCA  250

seq1  GACTGCCTCAGACCAGGGATCAGACAAACACACTCAACCCAAATTCCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGCCTCAGACCAGGGATCAGACAAACACACTCAACCCAAATTCCTGT  300

seq1  TACCTCTGTCAGCAAACAGCCTGCCCCATGAGGCTGTCAGGAATACGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCTGTCAGCAAACAGCCTGCCCCATGAGGCTGTCAGGAATACGAAG  350

seq1  AGAACTCCCCTGCTCCATCTGCTCAGCAAACTTTCATCGTCCGTACGGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTCCCCTGCTCCATCTGCTCAGCAAACTTTCATCGTCCGTACGGGC  400

seq1  TCTTTTAATGCACTTCTAACGCTGCTTCTGTGTGAATACACACCGCTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTAATGCACTTCTAACGCTGCTTCTGTGTGAATACACACCGCTACA  450

seq1  CACTGACTGGACAGTGACATTCTCTCAGAATGCCACTGTATCCCCTTGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGACTGGACAGTGACATTCTCTCAGAATGCCACTGTATCCCCTTGGG  500

seq1  GGCTGCCTGTGGGATAAGAACTTGAAAGAAGTGGAAGGAGTCCTGCCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGCCTGTGGGATAAGAACTTGAAAGAAGTGGAAGGAGTCCTGCCCCT  550

seq1  CTTCCCAGCCTTCCTTCTAACCAAGCAGCTTCCCTCCAACAGACCTACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCAGCCTTCCTTCTAACCAAGCAGCTTCCCTCCAACAGACCTACTT  600

seq1  CAAAAGTCCAGACCCAGTGAAGTCACACATGACCTCATAAACCTCCCACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGTCCAGACCCAGTGAAGTCACACATGACCTCATAAACCTCCCACT  650

seq1  TAACTGTTTAAAAGCCAGAGCAGAGCTGGTAACCGGGAGAGACAGCAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGTTTAAAAGCCAGAGCAGAGCTGGTAACCGGGAGAGACAGCAGAT  700

seq1  TCCTCAGCAGAATTGGGGTAGTTGCCGTTTAAGGAGGGGAAGTGTTCCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAGCAGAATTGGGGTAGTTGCCGTTTAAGGAGGGGAAGTGTTCCTT  750

seq1  CAACACCATTCTAAAATAAGTTGCTTGAACACAGTCTTTTATAACAGCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACCATTCTAAAATAAGTTGCTTGAACACAGTCTTTTATAACAGCCC  800

seq1  CGAGGTTTTTAAAGTACTGTGTTAAAAAGACACAATTCCTAATAGCTCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGTTTTTAAAGTACTGTGTTAAAAAGACACAATTCCTAATAGCTCAC  850

seq1  TTATTCTGACTGAACTAGCCTACAAAACAAACTTAGTTCCTTTATTTGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTGACTGAACTAGCCTACAAAACAAACTTAGTTCCTTTATTTGAC  900

seq1  AACTAGTTAAAGGCATGTTTGATACCTACTGCAGTGGCTGGTG-TTTTTC  949
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AACTAGTTAAAGGCATGTTTGATACCTACTGCAGTGGCTGGTGTTTTTTC  950

seq1  TATTTTCATTCTGACTTGGTTTCTGTTCTTTTCTGTAATTGCCCTGTG-A  998
      ||||||||||||||||||||||||||||||||||||| |||||||||| |
seq2  TATTTTCATTCTGACTTGGTTTCTGTTCTTTTCTGTATTTGCCCTGTGAA  1000

seq1  AAATATT  1005
      |||||||
seq2  AAATATT  1007