BAC Information

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BAC

Clone NameB6Ng01-238K01
Chromosome8 (Build37)
Map Location 76,254,520 - 76,255,250
singlet/doubletsinglet
Overlap genenone
Upstream geneSin3b, F2rl3, Large, LOC100039001, LOC666134
Downstream geneCrry-ps, LOC666146
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-238K01.bB6Ng01-238K01.g
ACCGA049271GA049272
length1,098731
definitionB6Ng01-238K01.b B6Ng01-238K01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattgtttttaatagctgggtagtactccatgtaaacatatcaca
ttttctatatccattcctctgttggaatgcatttggattctctccaggtt
ctcaatattataaataacagtgctgtgaacatagtggagcatgtgtcctt
gttatttgttaaagaaaatttgggtatatgcccaggagtggtatatctgg
gtcctcagttaatactaggtccagttttcttaagaaccaccagactgatg
tccagagaggtttaacagcttgcaatcccaccagcaatgggggagtgttc
ctcttttcccacatactcaccagcatctgctgtcacctaagtttttgatt
ttagccattctgattgttgtgcggtggaatctcagggttgttttgatttg
catttccctgatgacaaaggatgttgaacatttctttaggtgattctcag
ccattcgatattactccattgagaattctttgtttagctctgtaccccag
tttttaatagggttatttgattctctatgtctaacttcttgagatcattg
tatatattggatatttgccctcaatcagatgtaggattgataaacatctt
ttcccaatttgctggttgccattttgttgtccattgccttacagaagctt
tgcaattttatgaggtccattcttgtccattcttgtccattcttgatctt
agatcataagccattggtgttctgttcagggaaacttgtcctttgcccat
ttgttcgaggctttcccccacttactcctctataagtttcagtgtatctg
gttttatgtggaggtccttgatccacttggacttgaattttgtacaagga
gataagaatgtgtcaatttgcattcttctacatgctgatagccagttgaa
tcagcacaatggtttaacaaatgtgttaaaaatgctgttttgttccactg
gatggtttagctccacactcaaatatcaagtgtgtaggttcattctggtg
tctcaatcctcaggctgtttatccctgagtgaaagaacagctgcctgaat
ttgtttgtgaattaaattttaaatccaaccactcttgcctgaggttgt

gaattcccacataatctaattagactctttctcctgtgctgggtctccat
cactcattagtttccagctgtgtaacacattacaagggattttctaatta
cctttattttgtaggagttcttatctgcaggtggccagtggatgcttacc
caagctagactgtcaatcagcactgaccctcatatttgctcttttgtccc
tcatcttatttggaaccaaagaacaaagactcacacaaaacgggacttgt
aagggccaaaacttcagaggtgaagaaatgagaatttgcatctgagtcta
ctatttaataaataaagcctagattttatttagaacaatttcttttcaat
caagtcaccctgatagtggggatttgccatgtcaaccttttaggtgattg
ctgctatgtgcagtctcttgtacagatcagcagccattgaacaatctcta
taattggggaaagtgtatatagtatgaccccaagggcagccacatctgga
aagtgaagtgtatattgatcgtgactacatagcagaaacaaatagcaaat
gggctgccccaatcaatgattggctcaagccttttacatcctttctctta
acttttgtttcccaagttccaagcagcctttgtgatcaagcccaggctct
caccatggcttacaagaggttgattgccccttatgcaacatgctggatac
cagaaacttttaaaattaaggaggtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_76254520_76255250
seq2: B6Ng01-238K01.g_65_795 (reverse)

seq1  ACACACACCTCCTTAATTTTAAAAGTTTCTGGTATCCAGCATGTTGCATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACCTCCTTAATTTTAAAAGTTTCTGGTATCCAGCATGTTGCATA  50

seq1  AGGGGCAATCAACCTCTTGTAAGCCATGGTGAGAGCCTGGGCTTGATCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCAATCAACCTCTTGTAAGCCATGGTGAGAGCCTGGGCTTGATCAC  100

seq1  AAAGGCTGCTTGGAACTTGGGAAACAAAAGTTAAGAGAAAGGATGTAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCTGCTTGGAACTTGGGAAACAAAAGTTAAGAGAAAGGATGTAAAA  150

seq1  GGCTTGAGCCAATCATTGATTGGGGCAGCCCATTTGCTATTTGTTTCTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGAGCCAATCATTGATTGGGGCAGCCCATTTGCTATTTGTTTCTGC  200

seq1  TATGTAGTCACGATCAATATACACTTCACTTTCCAGATGTGGCTGCCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAGTCACGATCAATATACACTTCACTTTCCAGATGTGGCTGCCCTT  250

seq1  GGGGTCATACTATATACACTTTCCCCAATTATAGAGATTGTTCAATGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCATACTATATACACTTTCCCCAATTATAGAGATTGTTCAATGGCT  300

seq1  GCTGATCTGTACAAGAGACTGCACATAGCAGCAATCACCTAAAAGGTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATCTGTACAAGAGACTGCACATAGCAGCAATCACCTAAAAGGTTGA  350

seq1  CATGGCAAATCCCCACTATCAGGGTGACTTGATTGAAAAGAAATTGTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCAAATCCCCACTATCAGGGTGACTTGATTGAAAAGAAATTGTTCT  400

seq1  AAATAAAATCTAGGCTTTATTTATTAAATAGTAGACTCAGATGCAAATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAATCTAGGCTTTATTTATTAAATAGTAGACTCAGATGCAAATTC  450

seq1  TCATTTCTTCACCTCTGAAGTTTTGGCCCTTACAAGTCCCGTTTTGTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCTTCACCTCTGAAGTTTTGGCCCTTACAAGTCCCGTTTTGTGTG  500

seq1  AGTCTTTGTTCTTTGGTTCCAAATAAGATGAGGGACAAAAGAGCAAATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTTGTTCTTTGGTTCCAAATAAGATGAGGGACAAAAGAGCAAATAT  550

seq1  GAGGGTCAGTGCTGATTGACAGTCTAGCTTGGGTAAGCATCCACTGGCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTCAGTGCTGATTGACAGTCTAGCTTGGGTAAGCATCCACTGGCCA  600

seq1  CCTGCAGATAAGAACTCCTACAAAATAAAGGTAATTAGAAAATCCCTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAGATAAGAACTCCTACAAAATAAAGGTAATTAGAAAATCCCTTGT  650

seq1  AATGTGTTACACAGCTGGAAACTAATGAGTGATGGAGACCCAGCACAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTTACACAGCTGGAAACTAATGAGTGATGGAGACCCAGCACAGGA  700

seq1  GAAAGAGTCTAATTAGATTATGTGGGAATTC  731
      |||||||||||||||||||||||||||||||
seq2  GAAAGAGTCTAATTAGATTATGTGGGAATTC  731


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