BAC Information

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BAC

Clone NameB6Ng01-241I08
Chromosome8 (Build37)
Map Location 42,960,861 - 42,961,909
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc7a2, Pdgfrl, Mtus1, Fgl1, Pcm1, Asah1, Frg1, LOC100039376, Gm1815
Downstream geneLOC671994, Zfp353, EG620772, LOC628212
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-241I08.bB6Ng01-241I08.g
ACCGA051413GA051414
length1,1711,056
definitionB6Ng01-241I08.b B6Ng01-241I08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccctgtgaacataccagtccaacaggctactaaaataggcaacac
aaagccaacaaacactctgaaagtctagagatgaaacagaaaccaagaaa
caaaacacccatcagaatgtcacccaaaatcagcacttagacctacaatc
aaacattttaattcaaacagaattgctcctgtctaaaggaaacagggaca
aaaagtggagcagagattgaaggaaaggacatccaggaactgccgcacgt
gggatccatcacatatgcagccttcaaacccagtcactattgctgatgcc
aagaactgcttgctgataggactctgatatgtctcctgagagactctgcc
agagtcttaccgatacagatgtggttgagcacaaggacctcaatggagga
gttagggaaaggctttacctacagtggggaaagggatgcaaagcaatatc
ttttaaaatgtagtaataaaaaagtgaaagtttttttttaattaggtatt
tgcctcgtttacatttccaatgctatcacaaaagtcccccatacccaccc
ccacagtcccctacccacccactccccctttttggccctggcgttcccct
gtactggggcatataaagtttgcacgaccaatgggcctctctttccagtg
atggccaactaggccatcttttgatacatatgcagctagagacaagagct
ccagggtactggttagttcataatgttgttccacctatagggttgcagtt
ccctttagctccttggctactttctctagctcctccattgggggccctgt
gacccatccaatagctgactgtgatcatacacttctgtatttgatagtcc
ccagcatagtctcacaagagacagctatatctgggtcctttcagcaaaat
cttgctagtgtatgcaatggtgtcagcgtttggaagctgatcatgggatg
gatccctggatatggcaatcactagatggtccatcatttcgggtcacagc
tccaaatttatctctgtaatctccatggtgttttgtccatttctaaaggg
caaagtgtcacacttgtcttggtccttctgagttccatgcgttaagcatg
aatctaatcctggctatctagtactgctaattcactatcattggtacata
ttgggatggaagtttcccatg
gaattcctcaggaaggaccagctagagcctggtggattgttagttttata
tatgaggatccttaatgtctagtccagtgatgagtgtgtctataaaactc
aagctgttaagttaggaaatgaacttgacataccgctactctctactttg
tctttgggatactgaaaaatatgtaattctaaatatgtatttgtaatttt
tatcttccattcatcccttagttggtcactacttgtatgcttatttctta
ttggatgttgtctcccctaggattccttagaagaaaatcacagaattcca
tgtagatgctatattttattatgaatggagcctaagctgaggggaaagga
gaggagtgaagtgggcaagcaggagctgcaaatgcaaatgtatcgctgct
gacttggtctttaactagcctcacaaatatcatcataaagagcattagat
gtttgtgcccgaccaaatagctcaaccaaggagtgggtagcactagaatt
aggctgggactaattgccttccatatgccaagtttcacctcacaagatcc
atctccctttcgtttctggggaccacatattctgatgtcctagtgcatcc
tattctttagctttaacaaaaatccatgggtagaggaaaaatgactatgg
catagatacatagatgctgttacatgctgctcatgagtgatgtggaggat
ctggtacaatcacttgatgagacaccctctgtctggtcattgcaacagaa
gcactcaacccaggttcaagtgaagaacacaagttcttattaagagatct
aaaggctagccatgtgtcacatcagttaatcaccccccctcctccacaca
tacacactattgagatttttcaaaagttcttatatgattattaccagata
gaggacaatatgatcctgaaactaatgtgaatgaacatttatatattcta
tgttgaatatatttgcattttcaaaatcatagtaacatttaacatttata
ttacactttcacatggaggtggtgaattaatatgtcaaaacttatccaaa
tgagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_42960861_42961909
seq2: B6Ng01-241I08.g_65_1120

seq1  GAATTCCTCAGGAAGGACCAGCTAGAGCCTGGTGGATTGTTAGTTTTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCAGGAAGGACCAGCTAGAGCCTGGTGGATTGTTAGTTTTATA  50

seq1  TATGAGGATCCTTAATGTCTAGTCCAGTGATGAGTGTGTCTATAAAACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGGATCCTTAATGTCTAGTCCAGTGATGAGTGTGTCTATAAAACTC  100

seq1  AAGCTGTTAAGTTAGGAAATGAACTTGACATACCGCTACTCTCTACTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGTTAAGTTAGGAAATGAACTTGACATACCGCTACTCTCTACTTTG  150

seq1  TCTTTGGGATACTGAAAAATATGTAATTCTAAATATGTATTTGTAATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGGGATACTGAAAAATATGTAATTCTAAATATGTATTTGTAATTTT  200

seq1  TATCTTCCATTCATCCCTTAGTTGGTCACTACTTGTATGCTTATTTCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTCCATTCATCCCTTAGTTGGTCACTACTTGTATGCTTATTTCTTA  250

seq1  TTGGATGTTGTCTCCCCTAGGATTCCTTAGAAGAAAATCACAGAATTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATGTTGTCTCCCCTAGGATTCCTTAGAAGAAAATCACAGAATTCCA  300

seq1  TGTAGATGCTATATTTTATTATGAATGGAGCCTAAGCTGAGGGGAAAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGATGCTATATTTTATTATGAATGGAGCCTAAGCTGAGGGGAAAGGA  350

seq1  GAGGAGTGAAGTGGGCAAGCAGGAGCTGCAAATGCAAATGTATCGCTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGTGAAGTGGGCAAGCAGGAGCTGCAAATGCAAATGTATCGCTGCT  400

seq1  GACTTGGTCTTTAACTAGCCTCACAAATATCATCATAAAGAGCATTAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGGTCTTTAACTAGCCTCACAAATATCATCATAAAGAGCATTAGAT  450

seq1  GTTTGTGCCCGACCAAATAGCTCAACCAAGGAGTGGGTAGCACTAGAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTGCCCGACCAAATAGCTCAACCAAGGAGTGGGTAGCACTAGAATT  500

seq1  AGGCTGGGACTAATTGCCTTCCATATGCCAAGTTTCACCTCACAAGATCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGGGACTAATTGCCTTCCATATGCCAAGTTTCACCTCACAAGATCC  550

seq1  ATCTCCCTTTCGTTTCTGGGGACCACATATTCTGATGTCCTAGTGCATCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCCTTTCGTTTCTGGGGACCACATATTCTGATGTCCTAGTGCATCC  600

seq1  TATTCTTTAGCTTTAACAAAAATCCATGGGTAGAGGAAAAATGACTATGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTTAGCTTTAACAAAAATCCATGGGTAGAGGAAAAATGACTATGG  650

seq1  CATAGATACATAGATGCTGTTACATGCTGCTCATGAGTGATGTGGAGGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGATACATAGATGCTGTTACATGCTGCTCATGAGTGATGTGGAGGAT  700

seq1  CTGGTACAATCACTTGATGAGACACCCTCTGTCTGGTCATTGCAACAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTACAATCACTTGATGAGACACCCTCTGTCTGGTCATTGCAACAGAA  750

seq1  GCACTCAACCCAGGTTCAAGTGAAGAACACAAGTTCTTATTAAGAGATCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCAACCCAGGTTCAAGTGAAGAACACAAGTTCTTATTAAGAGATCT  800

seq1  -AAGGCTAGCCATGTGTCACATCAGTTAATCACCCCCCCTCCTCCACACA  849
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCTAGCCATGTGTCACATCAGTTAATCACCCCCCCTCCTCCACACA  850

seq1  TACACACTATTGAGATTTTTCAAAAGTTCTTATATGATTATTACCAGATA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TACACACTATTGAGATTTTTCAAAAGTTCTTATATGATTATTACCAGAT-  899

seq1  AGAGGACAATATGATCCTGAAACTAATGTGAATGACAATTTATAATATTC  949
      |||||||||||||||||||||||||||||||||||  |||||| ||||||
seq2  AGAGGACAATATGATCCTGAAACTAATGTGAATGAACATTTAT-ATATTC  948

seq1  TATGTTG-ATATATTTGCATTTTCAAAATCATAGT-ACATTT-ACATTTA  996
      ||||||| ||||||||||||||||||||||||||| |||||| |||||||
seq2  TATGTTGAATATATTTGCATTTTCAAAATCATAGTAACATTTAACATTTA  998

seq1  TATTACACTTTCACAT-GAG--TGTGAATT-ATATGTCAAAAC-TATCCA  1041
      |||||||||||||||| |||   ||||||| |||||||||||| ||||||
seq2  TATTACACTTTCACATGGAGGTGGTGAATTAATATGTCAAAACTTATCCA  1048

seq1  AATGAGCA  1049
      ||||||||
seq2  AATGAGCA  1056