BAC Information

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BAC

Clone NameB6Ng01-241O22
Chromosome8 (Build37)
Map Location 14,267,688 - 14,424,349
singlet/doubletdoublet
Overlap geneDlgap2
Upstream geneDcun1d2, Tmco3, Tfdp1, Atp4b, Grk1, Gm687, Gas6, LOC434282, 1700029H14Rik, Rasa3, 4932443I19Rik, LOC665516, Cdc16, Upf3a, AF366264, D8Ertd457e, 2410022L05Rik, EG665536, Fbxo25, LOC100041103, 2610019F03Rik, EG546036, Erich1, LOC100041140
Downstream geneC030037F17Rik, Cln8, Arhgef10, 2900016B01Rik, 5830468F06Rik, Kbtbd11, BB014433, Myom2, EG665599
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-241O22.bB6Ng01-241O22.g
ACCGA051718GA051719
length2921,078
definitionB6Ng01-241O22.b B6Ng01-241O22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,424,058 - 14,424,349)(14,267,688 - 14,268,784)
sequence
tacctctggagtactgagtgtcttatctcagcccctcaagctgactcagc
ttcctgtaactaacacatgcccatcttggtagtgggtaccagcagggcct
ctcagacattagggcacaagcaagagattctaaaattcatgcagtttgtg
ctgttgctttttattattttatgataagggggttgtgatggtttatatat
tcttggaccagggagtggcactatctggaggtgcggccttgttggaatag
gtgtgacctggttggaatgggtgtgtcactgtgggggtggcc
gaattcagaaccatgcctcttagaattaacccacatgcatctgccttacc
ctacagtggcctccacttgcagggccttctcattggcgatctaaaaggag
ggcgttagcggcaggaagggcaggtttcttcctgaagttataatactgta
aagggagccatcaagtgaaagtcactgaattctttcttttgaagttgaga
agtttgaatatttgtaaaaaaaaaaaaaaaccaaaaagacgaaaaaaaaa
aaacccaaaaaaaaccccaaaaacaaaacaaaaccaaaaaacaacaaaac
aaacaaacaaacaaaaaaacccaaaaccaccccaacccaaacattatagg
ataggtgcattttattgtagaaatactccaaactaaataaaaaggtctaa
aaactttcggtaaaataaagtattgattaggattttaaaaatatttattt
ttattacatcttgaatcatgtacctgtgcatgtatctgtgtatgggtatg
tgcttgtgagttcaggtacatacagaagccagaggctttgggtcccttgg
agctagttgcaggtggatgtgagatgctctgtgtggatgctaggaatcta
actgggtcctctgcaagagcagtaagtgttcttaaccgttgaaccatctc
tctagtccccttggctgagcttatggacaagcttaaaatgtccttatgta
ccgtcttgtgtagggacccagtggccactgtgctggttccttggctggtg
atgcttggttcctgcatcctccgccacaccccgcttagcatgatgagctt
ctcttcctcacaactgcagcttcacgtaacgacagtgatggatttcccgc
acgggctggctttatttagcagcatagtctcattgcttacagttttcagg
tggcatataaattcactctcagcccacttgatttatagcagccatttcct
caggtagagtttggggttatttgcagagatattacgacgatgccaataat
ggaactgagatgaacggttttttttatttaattttatttttatgtaacgg
actaagagcctggtctggtacgtggagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_14424058_14424349
seq2: B6Ng01-241O22.b_51_342 (reverse)

seq1  GGCCACCCCCACAGTGACACACCCATTCCAACCAGGTCACACCTATTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACCCCCACAGTGACACACCCATTCCAACCAGGTCACACCTATTCCA  50

seq1  ACAAGGCCGCACCTCCAGATAGTGCCACTCCCTGGTCCAAGAATATATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGCCGCACCTCCAGATAGTGCCACTCCCTGGTCCAAGAATATATAA  100

seq1  ACCATCACAACCCCCTTATCATAAAATAATAAAAAGCAACAGCACAAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCACAACCCCCTTATCATAAAATAATAAAAAGCAACAGCACAAACT  150

seq1  GCATGAATTTTAGAATCTCTTGCTTGTGCCCTAATGTCTGAGAGGCCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAATTTTAGAATCTCTTGCTTGTGCCCTAATGTCTGAGAGGCCCTG  200

seq1  CTGGTACCCACTACCAAGATGGGCATGTGTTAGTTACAGGAAGCTGAGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTACCCACTACCAAGATGGGCATGTGTTAGTTACAGGAAGCTGAGTC  250

seq1  AGCTTGAGGGGCTGAGATAAGACACTCAGTACTCCAGAGGTA  292
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGAGGGGCTGAGATAAGACACTCAGTACTCCAGAGGTA  292

seq1: chr8_14267688_14268784
seq2: B6Ng01-241O22.g_66_1143

seq1  GAATTCAGAACCATGCCTCTTAGAATTAACCCACATGCATCTGCCTTACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAACCATGCCTCTTAGAATTAACCCACATGCATCTGCCTTACC  50

seq1  CTACAGTGGCCTCCACTTGCAGGGCCTTCTCATTGGCGATCTAAAAGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGTGGCCTCCACTTGCAGGGCCTTCTCATTGGCGATCTAAAAGGAG  100

seq1  GGCGTTAGCGGCAGGAAGGGCAGGTTTCTTCCTGAAGTTATAATACTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGTTAGCGGCAGGAAGGGCAGGTTTCTTCCTGAAGTTATAATACTGTA  150

seq1  AAGGGAGCCATCAAGTGAAAGTCACTGAATTCTTTCTTTTGAAGTTGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGCCATCAAGTGAAAGTCACTGAATTCTTTCTTTTGAAGTTGAGA  200

seq1  AGTTTGAATATTTGTAAAAAAAAAAAAAAACCAAAAAGACGAAAAAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGAATATTTGTAAAAAAAAAAAAAAACCAAAAAGACGAAAAAAAAA  250

seq1  AAACCCAAAAAAAACCCCAAAAACAAAACAAAACCAAAAAACAACAAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCAAAAAAAACCCCAAAAACAAAACAAAACCAAAAAACAACAAAAC  300

seq1  AAACAAACAAACAAAAAAACCCAAAACCACCCCAACCCAAACATTATAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACAAACAAAAAAACCCAAAACCACCCCAACCCAAACATTATAGG  350

seq1  ATAGGTGCATTTTATTGTAGAAATACTCCAAACTAAATAAAAAGGTCTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTGCATTTTATTGTAGAAATACTCCAAACTAAATAAAAAGGTCTAA  400

seq1  AAACTTTCGGTAAAATAAAGTATTGATTAGGATTTTAAAAATATTTATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTCGGTAAAATAAAGTATTGATTAGGATTTTAAAAATATTTATTT  450

seq1  TTATTACATCTTGAATCATGTACCTGTGCATGTATCTGTGTATGGGTATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTACATCTTGAATCATGTACCTGTGCATGTATCTGTGTATGGGTATG  500

seq1  TGCTTGTGAGTTCAGGTACATACAGAAGCCAGAGGCTTTGGGTCCCTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGTGAGTTCAGGTACATACAGAAGCCAGAGGCTTTGGGTCCCTTGG  550

seq1  AGCTAGTTGCAGGTGGATGTGAGATGCTCTGTGTGGATGCTAGGAATCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGTTGCAGGTGGATGTGAGATGCTCTGTGTGGATGCTAGGAATCTA  600

seq1  ACTGGGTCCTCTGCAAGAGCAGTAAGTGTTCTTAACCGTTGAACCATCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGTCCTCTGCAAGAGCAGTAAGTGTTCTTAACCGTTGAACCATCTC  650

seq1  TCTAGTCCCCTTGGCTGAGCTTATGGACAAGCTTAAAATGTCCTTATGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTCCCCTTGGCTGAGCTTATGGACAAGCTTAAAATGTCCTTATGTA  700

seq1  CCGTCTTGTGTAGGGACCCAGTGGCCACTGTGCTGGTTCCTTGGCTGGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTCTTGTGTAGGGACCCAGTGGCCACTGTGCTGGTTCCTTGGCTGGTG  750

seq1  ATGCTTGGTTCCTGCATCCTCCGCCACACCCCGCTTAGCATGATGAGCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTGGTTCCTGCATCCTCCGCCACACCCCGCTTAGCATGATGAGCTT  800

seq1  CTCTTCCTCACAACTGCAGCTTCACGTAACGACAGTGATGGATTTCCCGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCTCACAACTGCAGCTTCACGTAACGACAGTGATGGATTTCCCGC  850

seq1  ACGGGCTGGC-TTATTTAGCAGCATAGTCTCATTGCTTAACAGTTTTCAG  899
      |||||||||| ||||||||||||||||||||||||||| |||||||||||
seq2  ACGGGCTGGCTTTATTTAGCAGCATAGTCTCATTGCTT-ACAGTTTTCAG  899

seq1  GTGGCATATAAA-TCACTCTCAGCCCACTTGATTTATAGCAGCCATTTCC  948
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GTGGCATATAAATTCACTCTCAGCCCACTTGATTTATAGCAGCCATTTCC  949

seq1  TCAGGTAGGAGTTGGGGTTAATTTGCAGAGATATTAAGGACAGATGCACA  998
      ||||||| ||||| ||| | ||||||||||||||| | ||| ||||  | 
seq2  TCAGGTA-GAGTTTGGGGTTATTTGCAGAGATATT-ACGAC-GATG--CC  994

seq1  AATAATGAAATTGAGAAAGGAAAAGGGTTTTTTTTTATTTTAATTTTTTA  1048
      ||||||| || |||||      || ||||||||||   |||||  |||||
seq2  AATAATGGAACTGAGA----TGAACGGTTTTTTTT--ATTTAA--TTTTA  1036

seq1  TTTTTATGGTAACGTGAAACTAAGAAGCCTGGGGTCTGGTACGTGGAGT  1097
      ||||||| ||||||    |||||| |||||  |||||||||||||||||
seq2  TTTTTAT-GTAACG---GACTAAG-AGCCT--GGTCTGGTACGTGGAGT  1078