BAC Information

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BAC

Clone NameB6Ng01-242C16
Chromosome8 (Build37)
Map Location 32,422,416 - 32,422,919
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC547008, Dusp26, Rnf122, BC019943, Rbm13, Fut10, LOC666330, LOC666568
Downstream gene7420700N18Rik, LOC100041329, EG330731, LOC100041340, Nrg1, 2010007E15Rik, EG666589
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-242C16.bB6Ng01-242C16.g
ACCGA051882GA051883
length9441,189
definitionB6Ng01-242C16.b B6Ng01-242C16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattgcttttaactgctgagtagtactccattgtgtaaatgcacc
acattttctgtatccatttctctgttgagggacatttgctttctttccag
cttctggctattataaataaggctgctatgaacatagtggagcatatgtc
cttattacaagtttgaaaatcttctgcgtatatgctcaggagaggtattg
ctagatcttctggtagtactacatccaattttctcaatattcaccagaca
gatttccagagtggttgtacaagcttgcaatcctaccaaaatggaggagt
gttcctctttctccacatcctcaccagcatctgctgtcacctgaattttt
gatcttagccattctgactagtttgaggtggaaactcagggttgttttct
tttttcttttttttttttttactttttttttcccaatttttattaggtat
ttagctcatttacatttccaatgctataccaaaagtcccccatacccacc
cacccccgctcccctacccacccacttccccattttggccctggcgttcc
cctgtactggggcatataaagtttgcatgtccaatgggcctctctttcca
gtgatggcagactaggccatcttttgatacatatgcagctagagtcaaga
gctcctgggtgctggttagttcataatgttgttccacctatagggttgca
gatccctttagctccttgggtactttctctagctcctccattgggagccc
tgtgatccatccattagctgactgtcaaatatccacttctgtgttgctag
gccccagcatagtctcaccaagaagacagctacatctggggtcctttaga
taaaatcttgctagtgtatgccattggtgtcagcgtttggatgcctgatt
tatgaggtgggatccctgggatatggcagtctctacaatgggtc
gaattccagagtggttgtaccaacttgcaatcccaccaacaatcaaggaa
tgtccctcttttcctgagaggtggaaactcagggttgttttgatttgcat
ttccctgatgattaaggatgttgaacattttttttcaggtgcttctcagc
cattcagattcctcaattgagaattctttgtttagctctgtaccccattt
tttattagggttatttgattttctggtgtctatcttcttgagttctttat
atatattggatattagtccccctatctgatttaggattggtaaaaatcct
ttcccaatcttttggtggccttttgtcttattgacagtgtcttctgcctt
acagaagctatgcaattttatgagatctgatttatcaattctcaatctta
cagcataagccattggttttctgttcaggaatttttgtcccctgtgccca
tatcttcgaggcttttccccacgttctccgctataaatttcagtgtctct
ggttttatgtggagttcctcaatccacttagacttgatcttagtacaaag
agataagattggatcaattcttattcttctacatgataactgccagttgt
gctggcaccatttgttgaaaatgctgtcttttccactggatcgtttttac
ttccttgtcaaagatcaagtgaccataggaatgtgggttcatttctgggt
cttcaattctattccattgatctacatgtctgtctctgtaccagtaccat
gcagtttttatcagtattgctgtggagtagagcttaaggtaagggataag
agtcttttattggtgagaatagttttcgatattctgggtttttttgttga
tagaaatgaatttgcaaattgctttttctatctctttgaagaattgagtt
ggaattttgatgggaattgcattgaatctgtagattgcttttgggtaatg
tggccattttaaatatattaattctgctgattcatgagcatgggagatct
ttcatctctgaggtgttcttcaatttcttttcttcagagacttgaagtct
gttttttagatctttattttgactttatttaaatttggaaggttagtgat
aaattaataggtgtcaattaggagttggacctgcaccattatcattggaa
ttgatacgattgcacactttcttcccttcctcttgggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_32422416_32422919
seq2: B6Ng01-242C16.b_449_964

seq1  TTC--TTTTTTTTTTTTAATTTTTTTT---CCATTTTTATTAGGTATTTA  45
      |||  ||||||||||||| ||||||||   | ||||||||||||||||||
seq2  TTCTTTTTTTTTTTTTTACTTTTTTTTTCCCAATTTTTATTAGGTATTTA  50

seq1  GCTCATTTACATTTCCAATGCTATACCAAAAGTCCCCCATACCCACCCAC  95
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATTTACATTTCCAATGCTATACCAAAAGTCCCCCATACCCACCCAC  100

seq1  CCCCAATCCCCTACCTACCCACTCCCCCTTTTTGGCCCTGGCGTTCCCCT  145
      ||||  ||||||||| ||||||| |||| |||||||||||||||||||||
seq2  CCCCGCTCCCCTACCCACCCACTTCCCCATTTTGGCCCTGGCGTTCCCCT  150

seq1  GTACTGGGGCATATAAAGTTTGCGTGTCCAATGGGCCTCTCTTTCCAGTG  195
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GTACTGGGGCATATAAAGTTTGCATGTCCAATGGGCCTCTCTTTCCAGTG  200

seq1  ATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCT  245
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCT  250

seq1  CCGGGGTACTGGTTAGTTCATAATGTTGTTCCGCCTATAGGGTTGCAGAT  295
      || |||| |||||||||||||||||||||||| |||||||||||||||||
seq2  CCTGGGTGCTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTTGCAGAT  300

seq1  CCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGAGCCCTGT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGAGCCCTGT  350

seq1  GATCCATCCATTAGCTGACTGT-GAGCATCCACTTCTGTGTTTGCTAGGC  394
      ||||||||||||||||||||||  |  ||||||||||||| |||||||||
seq2  GATCCATCCATTAGCTGACTGTCAAATATCCACTTCTGTG-TTGCTAGGC  399

seq1  CCCGGCATAGTCTCA-CAAG-AGACAGCTACATCT-GGGTCCTTTCGATA  441
      ||| ||||||||||| |||| |||||||||||||| ||||||||| ||||
seq2  CCCAGCATAGTCTCACCAAGAAGACAGCTACATCTGGGGTCCTTTAGATA  449

seq1  AAATCTTGCTAGTGTATG-CAATGGTGTCAGCGTTTGGATG-CTGA-TTA  488
      |||||||||||||||||| || ||||||||||||||||||| |||| |||
seq2  AAATCTTGCTAGTGTATGCCATTGGTGTCAGCGTTTGGATGCCTGATTTA  499

seq1  TGGGGT-GGATCCCTGG  504
      || ||| ||||||||||
seq2  TGAGGTGGGATCCCTGG  516