BAC Information

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BAC

Clone NameB6Ng01-245E02
Chromosome8 (Build37)
Map Location 67,697,522 - 67,880,651
singlet/doubletdoublet
Overlap geneLOC100040949, LOC665405
Upstream geneCpe, Sc4mol, Klhl2, LOC100040903, LOC619647, 3110005G23Rik, Trim75, Trim60, LOC665388, LOC665396
Downstream geneVaultrc-ps1, LOC100040967, March1, LOC100040986
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-245E02.bB6Ng01-245E02.g
ACCGA054187GA054188
length1,0861,048
definitionB6Ng01-245E02.b B6Ng01-245E02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,879,621 - 67,880,651)(67,697,522 - 67,698,555)
sequence
gaattcttgctccactctgaaatctcaggaactgggcctctgctgctcac
atttctctcagttgtctgatcttccaaattctccccagaatggcccatta
atctctgtttatactattctctgggttgcccagtccatggctgctaactc
tttaatatttcttctgcaaaccagttctaaaaatgtgagaaccacatggc
caggtttaccacagcaagactctgacttctccatgcaacttcctatgtta
gttatgactcattgctatgactaaacacctgcttagtctcaacttaaaag
agtgatgatttatttgagacttcatggtgattagataaacagtccatctt
gacagagaaagcatggaatcagaagcatgcaataatgtttccagttaaga
taaagagaaaaaacaaatggttccccttagatcacttttgtttctattca
atctgagactccagctcataggatggtactatccacattgaggctgtttc
taccacaagcaacccaatattgtgaaccatctttgcaaacatacccagag
ttttttctcctgtaagaaccagtacttacttaccaagccagggtcacctg
atacgtttggagaggctgggttagagggatcccagcaagactaaagcttg
acaggtttattgcaagcaattagactttttaattctcttatcaacagaaa
ccgaatacaatggtagttgccaggatgcaatgacatttgcaagctctaca
aggaataaaagtgctccaagagtctagtgcacctttcctggtccattagg
caaagactgggtacacatgataataacgagcagaattttactttggtcat
tacaaagcttaaagcaaagtctcagtgtgtagtgaaagctgaaactcagt
aatcctttttgcctctgactcctcaaggcctgggatgacatgtgcatgcc
acctgcggctggggttacatgtgaatgccacaatgcatagatgtaatctc
aactttaaaactcccattaaactctatgcaccctttcctatggaaaggtt
ccacatgtttttctgtagaataagaaatgacctaat
gaattcaaatgttcagagatatgtcaagaactatattaacccaaggggag
gaagggtgtgtttggtcactgtgctgccaagctaatcacacatctgctca
ttattgtaaatatgctactgcaggagagaagaaaagaaagaagaaaggaa
agacatgtacagatctttttttaaggttaattttttttcaaaaacaattt
tttattagatattttcttcatttacatttcaaatgctatccagaaagtcc
cctataccatctcccgccctgctccccagcccacccactcctgcttcctg
gccctggcattcccctgtactggggcatatgctcttcgcaagaccaaggg
cctctcctcccattgatggccaactaaaccatcctctgctacatatgcag
ctagagactacatgtacaggtcttataaagtgtgtgagaacaagtccatt
tcattgagtaaaaatgtaggctccagttgataattgggtgtatagaaaat
atgagaaagagcttttaaaaaagaaaagtagaaatattctaaagattttt
gggtatatcactgatgttttcttggtcttctctagaaaatagcacaatta
aattgcttatatattgctatacggttattctctcaactagcctgcccatg
ttaaaatgacttattttaacagcaacaaattattataccaattgtttagg
agatttggtctaccagttagtaactacagctgttacaatatctcctttaa
gttttatgggattggttgtgctcagggtgttatgaccgtagaccattttc
cttttaagatttgaatttcaaagaagatttaattatatttttctctttac
tcctagtgttacaaaatgaaacagcttcttcataaacctaacttttctat
ttccttgtagatgcaacgttaaaggtggaggaagacataatgctcctcga
cgtttttgctgacgtggtctgcaagtacttgtctaatattcccaggggta
attaagggatcttgtttatttttgttaacaaaaataatatattttact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_67879621_67880651
seq2: B6Ng01-245E02.b_101_1132 (reverse)

seq1  ATTAGGCCATTTCTTAATTCTACAG-AAAACATGTGGACCTTTTCCATAG  49
      |||||| |||||||| ||||||||| |||||||||||| | |||||||||
seq2  ATTAGGTCATTTCTT-ATTCTACAGAAAAACATGTGGAACCTTTCCATAG  49

seq1  GGAAGGGTGCATAGAGTTTAATGGGAGTTTTAAAGTTGAGATTACATCTA  99
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGGTGCATAGAGTTTAATGGGAGTTTTAAAGTTGAGATTACATCTA  99

seq1  TGCATTGTGGCATTCACATGTAACCCCAGCCGCAGGTGGCATGCACATGT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTGTGGCATTCACATGTAACCCCAGCCGCAGGTGGCATGCACATGT  149

seq1  CATCCCAGGCCTTGAGGAGTCAGAGGC-AAAAGGATTACTGAGTTTCAGC  198
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CATCCCAGGCCTTGAGGAGTCAGAGGCAAAAAGGATTACTGAGTTTCAGC  199

seq1  TTTCACTACACACTGAGACTTTGCTTTAAGCTTTGTAATGACCAAAGTAA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTACACACTGAGACTTTGCTTTAAGCTTTGTAATGACCAAAGTAA  249

seq1  AATTCTGCTCGTTATTATCATGTGTACCCAGTCTTTGCCTAATGGACCAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGCTCGTTATTATCATGTGTACCCAGTCTTTGCCTAATGGACCAG  299

seq1  GAAAGGTGCACTAGACTCTTGGAGCACTTTTATTCCTTGTAGAGCTTGCA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGTGCACTAGACTCTTGGAGCACTTTTATTCCTTGTAGAGCTTGCA  349

seq1  AATGTCATTGCATCCTGGCAACTACCATTGTATTCGGTTTCTGTTGATAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCATTGCATCCTGGCAACTACCATTGTATTCGGTTTCTGTTGATAA  399

seq1  GAGAATTAAAAAGTCTAATTGCTTGCAATAAACCTGTCAAGCTTTAGTCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTAAAAAGTCTAATTGCTTGCAATAAACCTGTCAAGCTTTAGTCT  449

seq1  TGCTGGGATCCCTCTAACCCAGCCTCTCCAAACGTATCAGGTGACCCTGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGATCCCTCTAACCCAGCCTCTCCAAACGTATCAGGTGACCCTGG  499

seq1  CTTGGTAAGTAAGTACTGGTTCTTACAGGAGAAAAAACTCTGGGTATGTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTAAGTAAGTACTGGTTCTTACAGGAGAAAAAACTCTGGGTATGTT  549

seq1  TGCAAAGATGGTTCACAATATTGGGTTGCTTGTGGTAGAAACAGCCTCAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAGATGGTTCACAATATTGGGTTGCTTGTGGTAGAAACAGCCTCAA  599

seq1  TGTGGATAGTACCATCCTATGAGCTGGAGTCTCAGATTGAATAGAAACAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGATAGTACCATCCTATGAGCTGGAGTCTCAGATTGAATAGAAACAA  649

seq1  AAGTGATCTAAGGGGAACCATTTGTTTTTTCTCTTTATCTTAACTGGAAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGATCTAAGGGGAACCATTTGTTTTTTCTCTTTATCTTAACTGGAAA  699

seq1  CATTATTGCATGCTTCTGATTCCATGCTTTCTCTGTCAAGATGGACTGTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTGCATGCTTCTGATTCCATGCTTTCTCTGTCAAGATGGACTGTT  749

seq1  TATCTAATCACCATGAAGTCTCAAATAAATCATCACTCTTTTAAGTTGAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAATCACCATGAAGTCTCAAATAAATCATCACTCTTTTAAGTTGAG  799

seq1  ACTAAGCAGGTGTTTAGTCATAGCAATGAGTCATAACTAACATAGGAAGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGCAGGTGTTTAGTCATAGCAATGAGTCATAACTAACATAGGAAGT  849

seq1  TGCATGGAGAAGTCAGAGTCTTGCTGTGGTAAACCTGGCCATGTGGTTCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGGAGAAGTCAGAGTCTTGCTGTGGTAAACCTGGCCATGTGGTTCT  899

seq1  CACATTTTTAGAACTGGTTTGCAGAAGAAATATTAAAGAGTTAGCAGCCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTTTAGAACTGGTTTGCAGAAGAAATATTAAAGAGTTAGCAGCCA  949

seq1  TGGACTGGGCAACCCAGAGAATAGTATAAACAGAGATTAATGGGCCATTC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTGGGCAACCCAGAGAATAGTATAAACAGAGATTAATGGGCCATTC  999

seq1  TGGGGAGAATTTGGAAGATCAGACAACTGAGAG  1031
      |||||||||||||||||||||||||||||||||
seq2  TGGGGAGAATTTGGAAGATCAGACAACTGAGAG  1032

seq1: chr8_67697522_67698555
seq2: B6Ng01-245E02.g_64_1110

seq1  GAATTCAAATGTTCAGAGATATGTCAAGAACTATATTAACCCAAGGGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATGTTCAGAGATATGTCAAGAACTATATTAACCCAAGGGGAG  50

seq1  GAAGGGTGTGTTTGGTCACTGTGCTGCCAAGCTAATCACACATCTGCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGTGTGTTTGGTCACTGTGCTGCCAAGCTAATCACACATCTGCTCA  100

seq1  TTATTGTAAATATGCTACTGCAGGAGAGAAGAAAAGAAAGAAGAAAGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGTAAATATGCTACTGCAGGAGAGAAGAAAAGAAAGAAGAAAGGAA  150

seq1  AGACATGTACAGATCTTTTTTTAAGGTTAATTTTTTTTCAAAAACAATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATGTACAGATCTTTTTTTAAGGTTAATTTTTTTTCAAAAACAATTT  200

seq1  TTTATTAGATATTTTCTTCATTTACATTTCAAATGCTATCCAGAAAGTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTAGATATTTTCTTCATTTACATTTCAAATGCTATCCAGAAAGTCC  250

seq1  CCTATACCATCTCCCGCCCTGCTCCCCAGCCCACCCACTCCTGCTTCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATACCATCTCCCGCCCTGCTCCCCAGCCCACCCACTCCTGCTTCCTG  300

seq1  GCCCTGGCATTCCCCTGTACTGGGGCATATGCTCTTCGCAAGACCAAGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGGCATTCCCCTGTACTGGGGCATATGCTCTTCGCAAGACCAAGGG  350

seq1  CCTCTCCTCCCATTGATGGCCAACTAAACCATCCTCTGCTACATATGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCTCCCATTGATGGCCAACTAAACCATCCTCTGCTACATATGCAG  400

seq1  CTAGAGACTACATGTACAGGTCTTATAAAGTGTGTGAGAACAAGTCCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGACTACATGTACAGGTCTTATAAAGTGTGTGAGAACAAGTCCATT  450

seq1  TCATTGAGTAAAAATGTAGGCTCCAGTTGATAATTGGGTGTATAGAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGAGTAAAAATGTAGGCTCCAGTTGATAATTGGGTGTATAGAAAAT  500

seq1  ATGAGAAAGAGCTTTTAAAAAAGAAAAGTAGAAATATTCTAAAGATTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAAAGAGCTTTTAAAAAAGAAAAGTAGAAATATTCTAAAGATTTTT  550

seq1  GGGTATATCACTGATGTTTTCTTGGTCTTCTCTAG-AAATAGCACAATTA  599
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GGGTATATCACTGATGTTTTCTTGGTCTTCTCTAGAAAATAGCACAATTA  600

seq1  AATTGCTTATATATTGCTATACGGTTATTCTCTCAACTAGCCTGCCCATG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCTTATATATTGCTATACGGTTATTCTCTCAACTAGCCTGCCCATG  650

seq1  TTAAAATGACTTATTTTAACAGCAACAAATTATTATACCAATTGTTTAGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATGACTTATTTTAACAGCAACAAATTATTATACCAATTGTTTAGG  700

seq1  AGATTTGGTCTACCAGTTAGTAACTACAGCTGTTACAATATCTCCTTTAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTGGTCTACCAGTTAGTAACTACAGCTGTTACAATATCTCCTTTAA  750

seq1  GTTTTATGGGATTGGTTGTGCTCAGGGTGTTATGACCGTAGACCATTT--  797
      ||||||||||||||||||||||||||||||||||||||||||||||||  
seq2  GTTTTATGGGATTGGTTGTGCTCAGGGTGTTATGACCGTAGACCATTTTC  800

seq1  CCTTTAAGA-TTGAA-TTCAAAGAAGATTTAAATTATATTTT--CCTTTA  843
      | ||||||| ||||| |||||||||||||| |||||||||||   |||||
seq2  CTTTTAAGATTTGAATTTCAAAGAAGATTT-AATTATATTTTTCTCTTTA  849

seq1  CTCCTAGGTGTTACAAAAATGAAACAGCTTCTTCATAAAACCTAAC-TTT  892
      |||||| ||||||| ||||||||||||||||||||| ||||||||| |||
seq2  CTCCTA-GTGTTAC-AAAATGAAACAGCTTCTTCAT-AAACCTAACTTTT  896

seq1  CTATTTCCTTGTAGATGCAACGTTAAAAGGTGGAGGAAGACATAATGCT-  941
      |||||||||||||||||||||||| |||||||||||||||||||||||| 
seq2  CTATTTCCTTGTAGATGCAACGTT-AAAGGTGGAGGAAGACATAATGCTC  945

seq1  CTCGACGTTTTTGCTGAGGT-GTCTGCAAGTACTTGTCATAATATT-CCA  989
      ||||||||||||||||| || ||||||||||||||||| ||||||| |||
seq2  CTCGACGTTTTTGCTGACGTGGTCTGCAAGTACTTGTC-TAATATTCCCA  994

seq1  GGG--TATTTAGGGATCTGTTTTATTTTGTATAAAATAAA------ATTT  1031
      |||   ||| ||||||||  ||||||||   ||| | |||      ||||
seq2  GGGGTAATTAAGGGATCTTGTTTATTTTTGTTAACAAAAATAATATATTT  1044

seq1  TAC  1034
      |||
seq2  TAC  1047