BAC Information

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BAC

Clone NameB6Ng01-245E19
Chromosome8 (Build37)
Map Location 38,421,770 - 38,422,850
singlet/doubletsinglet
Overlap genenone
Upstream geneEG544878, 6430573F11Rik, Dlc1, LOC100042892, A730069N07Rik, AI429214, LOC666877, LOC100041616, 1700016D18Rik, LOC641121
Downstream geneLOC621149, Sgcz
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-245E19.bB6Ng01-245E19.g
ACCGA054217GA054218
length1,0161,061
definitionB6Ng01-245E19.b B6Ng01-245E19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagattctttcccaatctgttggtggtct
ttttgtcttttttttaatgaaacataaatatgtttactctttttttttct
tttttcttttttttccatttttattaggtatttagctcatttacatttcc
aatgctataccaaaagtcccccatagccacccacccccactcccctacct
acccactccccttttttggccctggccttcccctgtactggggcatataa
agtttgcgtgtccaatgggcctctctttccagtgatggccgcctaggcca
tcttttgatacatatgcagctagagtcaagagctccggggtactggttag
ttcataatgttgttccacctatagggttgcagaaccctttagcttcttgg
gtactttctctagctccttcattgggggccaggtgatccatccaatagcc
gactgtgagcatccacttctatgtttgctaggcccaggcatactctgaca
agagacagctatatcagggtactttcagcataatcttgctagtgtatgca
atggtgtcagcatttggaagctgattctgggatggatccccggatatggc
agtctctacatggtccatctttttatctcagctccaaactttgtctctgt
acctccttccaagcgtcttttgttcccactgctaaggaggggcatagtgt
ccacacttcagtcttcatttttcttgagtttcatgtgtttaggaaattgt
atcttatatcttggatatccctaggttttgggctaatatccacttatcag
tgagtacatattgtgtgagttccttttgtgaatgtgttacctcactcaaa
atgatgccctctaaggtccatccatttgggctagggaatttcataaattc
attccttttaatagct
gaattctcattttatgcttgttagcaagttgtactttttttttttagaac
tctttctgagcatttaaaggctgtaggtccattttgatggatacataaga
ttcttttcactaaaacaaagtgaccctgcttaacatgaaatactagagaa
tctatacaggaagtaaatctagccagcctattcaccgtgatgccaagtct
taacaaatgcaatgaaagagaatcataggacatatttcagcagaggaaaa
acaatgcttcaaattgtaaatgaaacgtaagaataagagtttatgagggt
agaaacaaagggacataaatgaatcaatgctattattcatgacctaattt
ggaatgtgaaatcttgaaatataatactatcaaggtcacttttttttaaa
ctttacagtaaaatacattatgctacactgaagtttaaactgtacgcctt
tacaaactgcacgggattgggatgagtgctggctcctggttattaaacat
ttaaatcacctcaatattcaaaaccaaaagttcggggttggggatttagc
tcagtggtaaagtgcttgcctagcaagcccaaggccctgggttcggtcct
cagcaccggaaaaaagaaaaaaaaaaaaaaaaaaaaaaaagttcttttag
agttgggattcttctgtgttatgtgcagttttgtgtgtccagggcctaac
acattacatacgcactaaatgcatgctaaaccagtgtcctaatatagcct
ctgccaatgcataggtcaggacactgaaggattctttcggaggttagtgc
atattctattaaaaggggcttccttggttaaagaaatttgagagccatat
catagtagggctgtgttttagatacttcagttcagcattatcagatatct
tagagggaatttcatttttaaaggtccgaggaacagtgcttgtctatgag
gaggtgtcattcacagaatagcacatgtatacagcgagaaatgctactgt
gtgatacactgcatcagcgtatatctactatgcctgttctggctcccaag
gtcctatgact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_38421770_38422850
seq2: B6Ng01-245E19.g_67_1127

seq1  GAATTCTCATTTTATGCTTGTTAGCAAGTTGTACTTTTTTTTTTTAGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATTTTATGCTTGTTAGCAAGTTGTACTTTTTTTTTTTAGAAC  50

seq1  TCTTTCTGAGCATTTAAAGGCTGTAGGTCCATTTTGATGGATACATAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTGAGCATTTAAAGGCTGTAGGTCCATTTTGATGGATACATAAGA  100

seq1  TTCTTTTCACTAAAACAAAGTGACCCTGCTTAACATGAAATACTAGAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTCACTAAAACAAAGTGACCCTGCTTAACATGAAATACTAGAGAA  150

seq1  TCTATACAGGAAGTAAATCTAGCCAGCCTATTCACCGTGATGCCAAGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATACAGGAAGTAAATCTAGCCAGCCTATTCACCGTGATGCCAAGTCT  200

seq1  TAACAAATGCAATGAAAGAGAATCATAGGACATATTTCAGCAGAGGAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAATGCAATGAAAGAGAATCATAGGACATATTTCAGCAGAGGAAAA  250

seq1  ACAATGCTTCAAATTGTAAATGAAACGTAAGAATAAGAGTTTATGAGGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGCTTCAAATTGTAAATGAAACGTAAGAATAAGAGTTTATGAGGGT  300

seq1  AGAAACAAAGGGACATAAATGAATCAATGCTATTATTCATGACCTAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACAAAGGGACATAAATGAATCAATGCTATTATTCATGACCTAATTT  350

seq1  GGAATGTGAAATCTTGAAATATAATACTATCAAGGTCACTTTTTTTTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGTGAAATCTTGAAATATAATACTATCAAGGTCACTTTTTTTTAAA  400

seq1  CTTTACAGTAAAATACATTATGCTACACTGAAGTTTAAACTGTACGCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACAGTAAAATACATTATGCTACACTGAAGTTTAAACTGTACGCCTT  450

seq1  TACAAACTGCACGGGATTGGGATGAGTGCTGGCTCCTGGTTATTAAACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAACTGCACGGGATTGGGATGAGTGCTGGCTCCTGGTTATTAAACAT  500

seq1  TTAAATCACCTCAATATTCAAAACCAAAAGTTCGGGGTTGGGGATTTAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATCACCTCAATATTCAAAACCAAAAGTTCGGGGTTGGGGATTTAGC  550

seq1  TCAGTGGTAAAGTGCTTGCCTAGCAAGCCCAAGGCCCTGGGTTCGGTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGGTAAAGTGCTTGCCTAGCAAGCCCAAGGCCCTGGGTTCGGTCCT  600

seq1  CAGCACCGGAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAGTTCTTTTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACCGGAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAGTTCTTTTAG  650

seq1  AGTTGGGATTCTTCTGTGTTATGTGCAGTTTTGTGTGTCCAGGGCCTAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGGATTCTTCTGTGTTATGTGCAGTTTTGTGTGTCCAGGGCCTAAC  700

seq1  ACATTACATACGCACTAAATGCATGCTAAACCAGTGTCCTAATATAGCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTACATACGCACTAAATGCATGCTAAACCAGTGTCCTAATATAGCCT  750

seq1  CTGCCAATGCATAGGTCAGGGACACTGAAGGATTCTTTCGGAGGTTAGTG  800
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CTGCCAATGCATAGGTCA-GGACACTGAAGGATTCTTTCGGAGGTTAGTG  799

seq1  CATATTCTATTAAAAGGGGCTTCCTTGGTTAAAGAAATTTGAGAGCCATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTCTATTAAAAGGGGCTTCCTTGGTTAAAGAAATTTGAGAGCCATA  849

seq1  TCATAGTAGGGCTGTGTTTTAGATACTTCAGTTCAGCATTATCAGATATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGTAGGGCTGTGTTTTAGATACTTCAGTTCAGCATTATCAGATATC  899

seq1  TTAGAGGGAATTTCATTTTTAAAGGTCCGAGGAACAGTGCTTGTCTATGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGGGAATTTCATTTTTAAAGGTCCGAGGAACAGTGCTTGTCTATGA  949

seq1  GGAGGTGTCATTCACAAGAAATAGCCAACAATGTAATTACAGCGAGAAAA  1000
      ||||||||||||||||   ||||||  || |||||  ||||||||| |||
seq2  GGAGGTGTCATTCACA--GAATAGC--AC-ATGTA--TACAGCGAG-AAA  991

seq1  TGCTACTGTGTGATACACTTGCATCCAGCGTAATATCTACCTTATGCCTG  1050
      |||||||||||||||||| ||||| |||||| ||||||||  ||||||||
seq2  TGCTACTGTGTGATACAC-TGCAT-CAGCGT-ATATCTAC--TATGCCTG  1036

seq1  TCTCT-GCTCCCCACAGGGGTCCTCTATGACT  1081
      | ||| |||||| |    ||||  ||||||||
seq2  T-TCTGGCTCCCAA----GGTC--CTATGACT  1061