BAC Information

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BAC

Clone NameB6Ng01-246B02
Chromosome8 (Build37)
Map Location 46,129,217 - 46,130,235
singlet/doubletsinglet
Overlap geneFat1
Upstream geneLOC100039508, LOC100039673
Downstream geneMtnr1a, EG622523, F11, Klkb1, Cyp4v3, BC035537, Tlr3, Sorbs2, Pdlim3, Ccdc110, 1700029J07Rik, 1810047C23Rik, Ankrd37, Lrp2bp, Snx25
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-246B02.bB6Ng01-246B02.g
ACCGA054788GA054789
length1,2051,027
definitionB6Ng01-246B02.b B6Ng01-246B02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctcagtgctaaatatatttcacatccccttgattccagaacata
accacttccatgagtgcggtcaacataagattaggaactacactcttttt
ttattgaatattttctttatttacatgtcaaatgttatcccctttcccgg
tttcccccttgaggaaacccccatcccatcctccctccccctgctatgag
catatgcctctgtatttgcaaggctctggcagggcctctcaggagagaac
tatatcaggttcctgtcagcaaacacttcttggcatccacaatagtgtct
gggtttggtaactgtatatggttgtatacgggttgaaaccccaggtgaga
tggtctctggatggcctttccttcagtctctgctctacactttatctcta
catttgctcctgtgagtattttgttctccttctaaggaggactgaagcac
ccacactttggtctgccttcttcttgagcttcatgtggtctgtaaattat
atcttgagtatttggagcttttgggctaatatccacttatcagtgagtgc
atagctcgtgtgttcttttgtgaatgggtaatctcactcaggatgatatt
ttctagttccatccatttgcctaagaatttcatgaattcatcatttttaa
tagctgagtaaatagctattacacaatagctccattgtgtaaatttacca
cattttctgtgttcgttcctctgttgacggacatctgggttcttttaggc
ttctggatactataaataaggctgctttgaacatagtggagcatgttctt
attacatgttggagcatcttctgggtttatgcccaggagtggtatagctg
ggtcctcagatagtactatgtccaatttttctgaggaactgctaaactga
tttccagagtggttgtaccagcttgcaatcctaccagcaatttctttctc
cacatcctcgccagtatctgctgtcactgagtttttgattttagccattc
tgactggtgtgaagtggccctaccttaaacatagagcacatacagtaaca
tacagcaaacagtagcctacatcaaactaaatgagagaacttgagcaatc
ttacttgaatcagggcctagaacaagctgccaccctcttgctatctaatc
atatatagtacttgagttctaggcttgaaggcaattttaatcccacccaa
gatga
gaattctaggacaggtgccgtctgacatgtactacaaaggtctctcttcc
ttcttggcagatgtcagagtgacatcgatgagtgtgctgggaacccctgt
cggaacggggccctttgcgagaacacacacggctcctatcactgtaactg
cagccaggagtacagagggaagcactgtgaggatgcctctcccaaccact
acgtgtccaccccgtggaacatcggactggccgagggaataggtattatt
gtgtttatagctgggatagtcttactagtgatggtgttcgtcctctgccg
gaagatgatcagtcggaagaagaagcgccaggctgaacctgaagacaaac
gtttggggccaaccacggctttcttgcagagaccttattttgattcaaag
ctgaacaagaacatttactccgacatcccgccccaggtgccggtccgtcc
catttcctacactcccagcattccaagcgactcgagaaacaaccttgacc
gcaattccttcgaaggctccgcgatcccagagcatccagaattcagcacc
ttcaaccccgagtctatgcacgggcatcgaaaagccgtggctgtgtgcag
cgtagctccaaacttgcctccaccgccgccttccaactcgccctcagaca
gcgactccatacagaagcctagctgggactttgactacgacggtaagggt
gtgatgttttctatctcgccagtgctgcagaagtggtcttggctgaggtg
gtttgcggggatgaggatgaatgacgctttccaatctgaaatggtcctga
aaactcatttgcatattccagttactggctggggatggggagcttttaaa
tttatttttattcaattagatctagttatgttctaattaatattctagat
gtaactgatacacactatcaactttgatttggggggtgtttattataaca
aggagaaatattggtggggtcacctaagatactatttttttaattatttt
ggtgaatctgttgaagcaattatgtgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_46129217_46130235
seq2: B6Ng01-246B02.g_69_1095

seq1  GAATTCTAGGACAGGTGCCGTCTGACATGTACTACAAAGGTCTCTCTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGACAGGTGCCGTCTGACATGTACTACAAAGGTCTCTCTTCC  50

seq1  TTCTTGGCAGATGTCAGAGTGACATCGATGAGTGTGCTGGGAACCCCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGGCAGATGTCAGAGTGACATCGATGAGTGTGCTGGGAACCCCTGT  100

seq1  CGGAACGGGGCCCTTTGCGAGAACACACACGGCTCCTATCACTGTAACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAACGGGGCCCTTTGCGAGAACACACACGGCTCCTATCACTGTAACTG  150

seq1  CAGCCAGGAGTACAGAGGGAAGCACTGTGAGGATGCCTCTCCCAACCACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAGGAGTACAGAGGGAAGCACTGTGAGGATGCCTCTCCCAACCACT  200

seq1  ACGTGTCCACCCCGTGGAACATCGGACTGGCCGAGGGAATAGGTATTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGTCCACCCCGTGGAACATCGGACTGGCCGAGGGAATAGGTATTATT  250

seq1  GTGTTTATAGCTGGGATAGTCTTACTAGTGATGGTGTTCGTCCTCTGCCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTATAGCTGGGATAGTCTTACTAGTGATGGTGTTCGTCCTCTGCCG  300

seq1  GAAGATGATCAGTCGGAAGAAGAAGCGCCAGGCTGAACCTGAAGACAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATGATCAGTCGGAAGAAGAAGCGCCAGGCTGAACCTGAAGACAAAC  350

seq1  GTTTGGGGCCAACCACGGCTTTCTTGCAGAGACCTTATTTTGATTCAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGGGCCAACCACGGCTTTCTTGCAGAGACCTTATTTTGATTCAAAG  400

seq1  CTGAACAAGAACATTTACTCCGACATCCCGCCCCAGGTGCCGGTCCGTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACAAGAACATTTACTCCGACATCCCGCCCCAGGTGCCGGTCCGTCC  450

seq1  CATTTCCTACACTCCCAGCATTCCAAGCGACTCGAGAAACAACCTTGACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCTACACTCCCAGCATTCCAAGCGACTCGAGAAACAACCTTGACC  500

seq1  GCAATTCCTTCGAAGGCTCCGCGATCCCAGAGCATCCAGAATTCAGCACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTCCTTCGAAGGCTCCGCGATCCCAGAGCATCCAGAATTCAGCACC  550

seq1  TTCAACCCCGAGTCTATGCACGGGCATCGAAAAGCCGTGGCTGTGTGCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACCCCGAGTCTATGCACGGGCATCGAAAAGCCGTGGCTGTGTGCAG  600

seq1  CGTAGCTCCAAACTTGCCTCCACCGCCGCCTTCCAACTCGCCCTCAGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGCTCCAAACTTGCCTCCACCGCCGCCTTCCAACTCGCCCTCAGACA  650

seq1  GCGACTCCATACAGAAGCCTAGCTGGGACTTTGACTACGACGGTAAGGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGACTCCATACAGAAGCCTAGCTGGGACTTTGACTACGACGGTAAGGGT  700

seq1  GTGATGTTTTCTATCTCGCCAGTGCTGCAGAAGTGGTCTTGGCTGAGGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGTTTTCTATCTCGCCAGTGCTGCAGAAGTGGTCTTGGCTGAGGTG  750

seq1  GTTTGCGGGGATGAGGATGAATGACGCTTTCCAATCTGAAATGGTCCTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCGGGGATGAGGATGAATGACGCTTTCCAATCTGAAATGGTCCTGA  800

seq1  AAACTCATTTGCATATTCCAGTTACTGGCTGGGGATTGGGAGCTTT--AA  848
      |||||||||||||||||||||||||||||||||||| |||||||||  ||
seq2  AAACTCATTTGCATATTCCAGTTACTGGCTGGGGATGGGGAGCTTTTAAA  850

seq1  ATTATTTTTATTCAATTAGATCTAGTTATGTTCTAATTAATATTCTAGAT  898
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTTATTCAATTAGATCTAGTTATGTTCTAATTAATATTCTAGAT  900

seq1  GTAACTGATACACACTATCAACTTTGATTTGGGGGTGTTTTATTATAACA  948
      |||||||||||||||||||||||||||||||||||   ||||||||||||
seq2  GTAACTGATACACACTATCAACTTTGATTTGGGGGGTGTTTATTATAACA  950

seq1  A-GAGAAATAATGGTGGGGTCA-CTAAGATACTAATTTTTTTATTA-TTT  995
      | |||||||| ||||||||||| ||||||||||| |||||| |||| |||
seq2  AGGAGAAATATTGGTGGGGTCACCTAAGATACTATTTTTTTAATTATTTT  1000

seq1  GTTGAATCTGTTG-AGCA--TATGTGC  1019
      | ||||||||||| ||||  |||||||
seq2  GGTGAATCTGTTGAAGCAATTATGTGC  1027