BAC Information

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BAC

Clone NameB6Ng01-246C24
Chromosome8 (Build37)
Map Location 54,166,331 - 54,167,516
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040220, LOC623935, 1190028D05Rik, LOC676688
Downstream geneAga, Neil3, LOC100040107, Vegfc
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-246C24.bB6Ng01-246C24.g
ACCGA054876GA054877
length6761,167
definitionB6Ng01-246C24.b B6Ng01-246C24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgattgtatcaatgggtgggaaaatttttggcaaatttcaaca
tttttttctggataaaattactttgtagaaatagtaaacaaggagtactc
ttcaaaaatgataaatatcattaaatcagattcccaataggcttttggaa
tagatgaagaggacatggatgcttattcacaaatatttatttgatttaga
gcaaggagtctcactcttactatttctgtttaacatatacaggaggtact
ctcaagatcaactagataagaaaaataagagatacttaaagaagaaggaa
agaaacaaatgatttctatttcaagataaccaatcatcaaatttaaagat
tcaaacaaagattttttcagttgtatttaaattaattcagcaaagtttca
ggatataaccaacataaaatgtctgtatttcaatacaaggcaaatggtct
acacaaaatacgtcacaaactatcctctttgcaactgaataaaaacaatg
acaaatttagccaataaagcaaattatctgtgctctgaaaactatatttt
cagtgactaaagaactttaaggggacacaaataatttgaaacacaatcta
tgctaaaattttaaagggataaatttgctgaaatacccatgctacttatt
tgataaaatctctgtcaaaaatctag

gaattcatttcagaaaaaagtactttaactgggtatcttaaggtttgttt
aagaaaatctgaaaatagcctggcagtggtggcacatgcctttaatccca
gcacttgggaggcagaggcaggtggatttctgagttcgaggccagcctgg
tcttctcagtgagttccatgacagccagggcaatacagagaaaccctgtc
tcagaaaagaaagaaaaaagaaagaaaatctgacaagataaaataaacct
caaatgcatatgttataataagttttgctagcatttagataattattgct
tgctcaatatctgttcaagttcttggtttaaagtcctttggccggtgcat
tttgcatattttcccagcttacatactttgaaataattcttggcttctta
ttttttagattttttgtgtggatttgtgacgagcttggacgtaagtgtct
gggatctgagtccactccatggaagaggcaggagatactgagctaaactg
tttaagacacagtgtgaattagtaaatacacatagattgccagctgtaag
aagcagcataatggggcataaaaagaaatgcacttcaagatgtcttgtgt
gtctgatgcctacagtgtatttttttttttaatgctggtagttcattgtg
attacttctgcaaactttattgtatgtcgtgagtttctgagatttctcaa
agacaatggaaaataatccttcaaagaatctcattttgctttttatctaa
atgtatcacttttattcccttcttacctttcattcaacgtatttctaata
tttaatttgttcccttttatagcccctttgtaagtcaatttattcaacca
tacaatataaaggggtatgttaaaaatctttcgctagatatattctaatg
tgaggtgtgcttttattgaatgctacagtgcttggcatatagtgtttcat
atatcttagaaatttctagcttgtttctttttcatgtgtcgtagatctgc
tagcgaaatatatacagaaagagaaatgaaacagttctcaagagaaaata
agcaacagcagtgatccttgaaaaacgaacatcaataacgattgtaaatc
acttatttttccagtgagactttcctgcatctagccaaggctgaacctta
ggacagtgatactgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_54166331_54167516
seq2: B6Ng01-246C24.g_66_1232

seq1  GAATTCATTTCAGAAAAAAGTACTTTAACTGGGTATCTTAAGGTTTGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTCAGAAAAAAGTACTTTAACTGGGTATCTTAAGGTTTGTTT  50

seq1  AAGAAAATCTGAAAATAGCCTGGCAGTGGTGGCACATGCCTTTAATCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAATCTGAAAATAGCCTGGCAGTGGTGGCACATGCCTTTAATCCCA  100

seq1  GCACTTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGG  150

seq1  TCTTCTCAGTGAGTTCCATGACAGCCAGGGCAATACAGAGAAACCCTGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCAGTGAGTTCCATGACAGCCAGGGCAATACAGAGAAACCCTGTC  200

seq1  TCAGAAAAGAAAGAAAAAAGAAAGAAAATCTGACAAGATAAAATAAACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAAAGAAAGAAAAAAGAAAGAAAATCTGACAAGATAAAATAAACCT  250

seq1  CAAATGCATATGTTATAATAAGTTTTGCTAGCATTTAGATAATTATTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGCATATGTTATAATAAGTTTTGCTAGCATTTAGATAATTATTGCT  300

seq1  TGCTCAATATCTGTTCAAGTTCTTGGTTTAAAGTCCTTTGGCCGGTGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAATATCTGTTCAAGTTCTTGGTTTAAAGTCCTTTGGCCGGTGCAT  350

seq1  TTTGCATATTTTCCCAGCTTACATACTTTGAAATAATTCTTGGCTTCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATATTTTCCCAGCTTACATACTTTGAAATAATTCTTGGCTTCTTA  400

seq1  TTTTTTAGATTTTTTGTGTGGATTTGTGACGAGCTTGGACGTAAGTGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAGATTTTTTGTGTGGATTTGTGACGAGCTTGGACGTAAGTGTCT  450

seq1  GGGATCTGAGTCCACTCCATGGAAGAGGCAGGAGATACTGAGCTAAACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCTGAGTCCACTCCATGGAAGAGGCAGGAGATACTGAGCTAAACTG  500

seq1  TTTAAGACACAGTGTGAATTAGTAAATACACATAGATTGCCAGCTGTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGACACAGTGTGAATTAGTAAATACACATAGATTGCCAGCTGTAAG  550

seq1  AAGCAGCATAATGGGGCATAAAAAGAAATGCACTTCAAGATGTCTTGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGCATAATGGGGCATAAAAAGAAATGCACTTCAAGATGTCTTGTGT  600

seq1  GTCTGATGCCTACAGTGTATTTTTTTTTTTAATGCTGGTAGTTCATTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGATGCCTACAGTGTATTTTTTTTTTTAATGCTGGTAGTTCATTGTG  650

seq1  ATTACTTCTGCAAACTTTATTGTATGTCGTGAGTTTCTGAGATTTCTCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTTCTGCAAACTTTATTGTATGTCGTGAGTTTCTGAGATTTCTCAA  700

seq1  AGACAATGGAAAATAATCCTTCAAAGAATCTCATTTTGCTTTTTATCTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAATGGAAAATAATCCTTCAAAGAATCTCATTTTGCTTTTTATCTAA  750

seq1  ATGTATCACTTTTATTCCCTTCTTACCTTTCATTCAACGTATTTCTAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATCACTTTTATTCCCTTCTTACCTTTCATTCAACGTATTTCTAATA  800

seq1  TTTAATTTGTTCCCTTTTATAGCCCCTTTGTAAGTCAATTTATTCAACCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTTGTTCCCTTTTATAGCCCCTTTGTAAGTCAATTTATTCAACCA  850

seq1  TACAATAT-AAGGGGTATGTTAAAAATCTTTCGCTAGATATATTTCTAAT  899
      |||||||| ||||||||||||||||||||||||||||||||| |||||||
seq2  TACAATATAAAGGGGTATGTTAAAAATCTTTCGCTAGATATA-TTCTAAT  899

seq1  GTGAGGTGTGC-TTTATTGAATGCTACAGTGCTTGGCATATAGTGTTTCA  948
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGTGTGCTTTTATTGAATGCTACAGTGCTTGGCATATAGTGTTTCA  949

seq1  TATATCTTAGAAATTTCTAGCTTGGTTTCTTTTTCATGTGTCGTAGATCT  998
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TATATCTTAGAAATTTCTAGCTT-GTTTCTTTTTCATGTGTCGTAGATCT  998

seq1  GCTAGCGAAATAATAATACAGAAAGAAGAAATGAAACAGTTCTCAAAGAG  1048
      ||||||||||||   |||||||||| |||||||||||||||||| |||||
seq2  GCTAGCGAAATA--TATACAGAAAG-AGAAATGAAACAGTTCTC-AAGAG  1044

seq1  AAAATAAGCAAACAGCAGGTGATCCCTTGAAAAAAGGACATCATTAACGA  1098
      ||||||||| ||||||| ||||| |||||||||| | |||||| ||||||
seq2  AAAATAAGC-AACAGCA-GTGAT-CCTTGAAAAACGAACATCAATAACGA  1091

seq1  TTGTAAAATCACTTTTATTTTCCCAGTGAAGGGTTTCCTGCACATCCTAG  1148
      |||| |||||||  ||||||| |||||| ||  |||||||||    ||||
seq2  TTGT-AAATCAC--TTATTTTTCCAGTG-AGACTTTCCTGCA---TCTAG  1134

seq1  CCCAGGGCTGGAGACCTTTAGGACAGTGATACTTGTTT  1186
       ||| ||||   || | ||||||||||||||| |||||
seq2  -CCAAGGCT---GAACCTTAGGACAGTGATAC-TGTTT  1167


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