BAC Information

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BAC

Clone NameB6Ng01-247D15
Chromosome8 (Build37)
Map Location 109,258,097 - 109,377,017
singlet/doubletdoublet
Overlap geneTmco7
Upstream geneGfod2, Ranbp10, Tsnaxip1, Cenpt, LOC100041617, Thap11, Nutf2, Edc4, Nrn1l, Pskh1, Ctrl, Psmb10, Lcat, Slc12a4, Dpep3, Dpep2, Ddx28, Dus2l, Nfatc3, Rbm35b, Lypla3, Slc7a6, Slc7a6os, Prmt7, Smpd3, Zfp90, 6030452D12Rik, Cdh3, LOC100042734, Cdh1
Downstream geneHas3, 5830457O10Rik, Cirh1a, EG234703, Sntb2, Vps4a, Cog8, Nip7, Tmed6, Terf2, EG667847, Cyb5b, LOC100042791, Nfat5, Nqo1, Nob1, Wwp2, LOC100042812, Psmd7, LOC100041744, LOC668038
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-247D15.bB6Ng01-247D15.g
ACCGA055617GA055618
length367833
definitionB6Ng01-247D15.b B6Ng01-247D15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(109,258,097 - 109,258,469)(109,376,311 - 109,377,017)
sequence
tttacctcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgt
gtatctcctggggactcaaccctttcacctgctaggtgtaccctgagcta
cattctgggctctttgttgtaactgaggaatccacataaccacatcagtg
tggctcccagtctgcagcttacatcagggttcactctggggcttgtactg
ttaataggttccacatgtctgccatcctcctgtatcctaaaaataggttc
actctcacatctgccccctgtactcactcacttacactctctctctctct
ctctctctctctctctctctctctctctctctcacatgtatccttgtgaa
tttcttcctctcacttt
gaattccatactgtgatccaagctgtcttagaactcactatacagcccat
atttgactttgaactcactaaaaccctcctgtctcagccctgtgagcgcc
atggtcataagtgttaactaccatgcctgacttagaagagttatctgaca
gtttttaataatttggtcatgcttacaagggtgtcactaaatcatcttcc
ctttgaatttgataatgaagtccggaagaaaaaaattactctctcaaatt
gagaacaccaaaaattaataaaatcaaatactctagtcctttgatagcag
ttcaaactaagagtccacttatacagagagataaagagactaaggctggg
aggggtggacgtgttcagatggagaagatcttaaagtcatcagtgtacac
cttcaggcacactggcctaaacgccgtggacagtactcggcctgcgaagc
aggctctatcttttaaaatatattatatataattttaaaatgacttttaa
ttacgtgtgtgtgtgtgtttatgtacatgtgagtgctggtactctttttt
ttttttttttttttttttttttggtttttcgagacagggtttctctgtat
agccctggctgtcctggaactcactttgtagaccaggctggcctcaaact
cagagatccacctgcctctgcctcccgagtgctgggattaaaggcgtgcg
ccaccacgcccgggcttgagtgctggtactcttaagaagccagaggtgtc
tattcggctggagccagagccacgggccattgtgagtatctcatgtgggc
tgggaaccaagttggggtcctcggcaagatcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_109258097_109258469
seq2: B6Ng01-247D15.b_41_413

seq1  GAATTCTTTACCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTACCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  50

seq1  TTGTGTGTATCTCCTGGGGACTCAACCCTTTCACCTGCTAGGTGTACCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGTATCTCCTGGGGACTCAACCCTTTCACCTGCTAGGTGTACCCT  100

seq1  GAGCTACATTCTGGGCTCTTTGTTGTAACTGAGGAATCCACATAACCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTACATTCTGGGCTCTTTGTTGTAACTGAGGAATCCACATAACCACA  150

seq1  TCAGTGTGGCTCCCAGTCTGCAGCTTACATCAGGGTTCACTCTGGGGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGTGGCTCCCAGTCTGCAGCTTACATCAGGGTTCACTCTGGGGCTT  200

seq1  GTACTGTTAATAGGTTCCACATGTCTGCCATCCTCCTGTATCCTAAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGTTAATAGGTTCCACATGTCTGCCATCCTCCTGTATCCTAAAAAT  250

seq1  AGGTTCACTCTCACATCTGCCCCCTGTACTCACTCACTTACACTCTCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCACTCTCACATCTGCCCCCTGTACTCACTCACTTACACTCTCTCT  300

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACCTGTATCCT  350
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACATGTATCCT  350

seq1  TGCAGATTGCTTCCTCTCACTTT  373
      ||   ||| ||||||||||||||
seq2  TGTGAATTTCTTCCTCTCACTTT  373

seq1: chr8_109376311_109377017
seq2: B6Ng01-247D15.g_65_771 (reverse)

seq1  GTGGTGGCGCACGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGGCGCACGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGTGG  50

seq1  ATCTCTGAGTTTGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGAGTTTGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGC  100

seq1  CAGGGCTATACAGAGAAACCCTGTCTCGAAAAACCAAAAAAAAAAAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCTATACAGAGAAACCCTGTCTCGAAAAACCAAAAAAAAAAAAAAA  150

seq1  AAAAAAAAAAAAAGAGTACCAGCACTCACATGTACATAAACACACACACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAGAGTACCAGCACTCACATGTACATAAACACACACACA  200

seq1  CACGTAATTAAAAGTCATTTTAAAATTATATATAATATATTTTAAAAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTAATTAAAAGTCATTTTAAAATTATATATAATATATTTTAAAAGAT  250

seq1  AGAGCCTGCTTCGCAGGCCGAGTACTGTCCACGGCGTTTAGGCCAGTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCTGCTTCGCAGGCCGAGTACTGTCCACGGCGTTTAGGCCAGTGTG  300

seq1  CCTGAAGGTGTACACTGATGACTTTAAGATCTTCTCCATCTGAACACGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAGGTGTACACTGATGACTTTAAGATCTTCTCCATCTGAACACGTC  350

seq1  CACCCCTCCCAGCCTTAGTCTCTTTATCTCTCTGTATAAGTGGACTCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCTCCCAGCCTTAGTCTCTTTATCTCTCTGTATAAGTGGACTCTTA  400

seq1  GTTTGAACTGCTATCAAAGGACTAGAGTATTTGATTTTATTAATTTTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAACTGCTATCAAAGGACTAGAGTATTTGATTTTATTAATTTTTGG  450

seq1  TGTTCTCAATTTGAGAGAGTAATTTTTTTCTTCCGGACTTCATTATCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTCAATTTGAGAGAGTAATTTTTTTCTTCCGGACTTCATTATCAAA  500

seq1  TTCAAAGGGAAGATGATTTAGTGACACCCTTGTAAGCATGACCAAATTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGGGAAGATGATTTAGTGACACCCTTGTAAGCATGACCAAATTAT  550

seq1  TAAAAACTGTCAGATAACTCTTCTAAGTCAGGCATGGTAGTTAACACTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACTGTCAGATAACTCTTCTAAGTCAGGCATGGTAGTTAACACTTA  600

seq1  TGACCATGGCGCTCACAGGGCTGAGACAGGAGGGTTTTAGTGAGTTCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCATGGCGCTCACAGGGCTGAGACAGGAGGGTTTTAGTGAGTTCAAA  650

seq1  GTCAAATATGGGCTGTATAGTGAGTTCTAAGACAGCTTGGATCACAGTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAATATGGGCTGTATAGTGAGTTCTAAGACAGCTTGGATCACAGTAT  700

seq1  GGAATTC  707
      |||||||
seq2  GGAATTC  707