BAC Information

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BAC

Clone NameB6Ng01-247L10
Chromosome8 (Build37)
Map Location 19,712,179 - 19,713,303
singlet/doubletsinglet
Overlap genenone
Upstream geneMcph1, Angpt2, Agpat5, LOC100040486, Xkr5, Defb40, Defb37, Defb38, Defb39, Defb12, Defb34, EG546038, Spag11, Defb14, Defb4, EG654452, Defb6, EG574081, Defb5, Defb3, Defb54-ps, LOC100040504, LOC100040514, Defb8, LOC100040528, LOC100041511, Defb7, LOC670326, LOC100040561, LOC624198, EG665730
Downstream gene4930467E23Rik, LOC100041567, LOC547150, LOC100040599, EG665822, 6820431F20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-247L10.bB6Ng01-247L10.g
ACCGA055977GA055978
length1,2181,110
definitionB6Ng01-247L10.b B6Ng01-247L10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctagaacgtctttaatttctttatttcttccttgacccagagatc
attgagtagagagttgttcagttcccatgagtgtgtaggctttctggttt
ttctgttgttattgaagtccacctttaacctactgtgttctgataggatg
caaggggtcatttcaaattttttgtatctgaagaggctttctttgtgacc
aatgatatggtcaattttggagaaagttccagaagatgatgagaaaaagt
tacatgctcttgatttggggtgaaatattctacacataatgcttaggtcc
atttgattgataacatctgttagttttattatttctccatttagtttttg
tctgaatgacctgtagattggtgaaagagaagtgttgaagtctcccatta
ataatctatggggtttggtgtatgctttaagctttaatagtgttctctta
caaacgtggttgtccttgtgtttgaaacatagatgttcagaattgagata
tcatctcagtagatttttcttttgatgagtatgaagcatactcatacagg
gaagcctgtatgaagtatatgaagtatatgaagtatatgaagtatactca
tacagtatgaaggatactcatacagggaagcctgtctcttttgattacct
ttggttaaaagtctataatattagatattagaaggttttcgtcttggttt
gactcagcttgatacttaggtctgcttgcttgaaaaattttggttcagca
ctgcactctgaggtaatgactatctttattgctgatgtgtgtttcttgta
tgcactacaatagtgtatcttgttttcacatccattctatttgcttgtgt
gtgtgtgtgtgtttaattagaaaattgagtcgatttatattgagagatat
tagtgacctgtgattgatagtgcctatttttttttttgaagcttaaaaat
gaaagctttatttttctgagttgctcatgaactttggacatttcatgatt
ctggaacttgtatcccgggaatgggagctgtacaaccatttttttataga
aatggaaaacaaagcaagggttgggcttgttgccattgaaccgattttga
cttaaggcttagcaggtaatttaccaaggaagttaacatgggtgaacttc
tttgggccttatccggagtcacgtgtttttcagggcttcacttggaattt
gtagatcctattgtagcg
gaattccacatcaagacgggctttccagctgtggctcgtggctgaaagtc
tgctgtttgcagagcaagtacctgggtaatttggatactgttgtggccac
ctcagatgttgatataaaacaaggagagacagagagaggcacattctatt
taaataatcaaaccaaatccaagtgctcgtacgccacagctgcttggggg
aaaacagttccagcttcttgccttcttccaactgggggccctctggcttc
cccaaacctgtgtgtgtcttctggctttcacttagaagagaagacactgg
tctttgccttctggctgatcagcccaatcaagcaaggtaccttgtccaaa
ggtgaggttgtggcttcatcatccaaatgatactttgtgtttcagagtgc
ctgcaaatgtactgtcattgtcagagaaaaaatttaaactctttggtctg
ggactcagggacagaatccataatttcatgacttcctctcaagactgttc
tcatgttgtacaagttcctgcccaaacaaatcacctacattttttttctg
gaatctcctgctcatttgtgtctgtcaatgcagcagtgggtctacctctc
taccctttgttgctgttgttgttacatttattctcttctacaaacaatgc
tacagatacttttgtagaagctgagcactggaaagtttcattggaagctt
catatcctgcccctgtggctaggagctgttcttgacatctgctctaagtc
ttgcctctccgcctccccaagctgttcttgctctaggactgcactgaact
gtaggagcataagtcatctggagagttagtattaaatgggaaacttcagg
ggaccagcaggatggctcagttggtcaaggcgctctgctactgagtctga
tgacctgagtttgattcctggaactcatatggcaaagagagagaagagag
aagagagagagaagagaagaggaaaatactgaccttccacgtgcatgagt
tttgtattgcatgagtggagagtggggagaataactgggaaaaattacca
catggtagaaaggagttgagacagagtccacccagtcttccttttcacca
gtctctgtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_19712179_19713303
seq2: B6Ng01-247L10.g_73_1180

seq1  ATTCCACATCAAGACGGGGTTTCCAGCTGTGGCTCTTGGCTGAAAGTCTG  50
      |||||||||||||||||| |||||||||||||||| ||||||||||||||
seq2  ATTCCACATCAAGACGGGCTTTCCAGCTGTGGCTCGTGGCTGAAAGTCTG  50

seq1  CTGTTTGCAGAGCAAGTACCTGGGTAATTTGGATACTGTTGTGGCCACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTGCAGAGCAAGTACCTGGGTAATTTGGATACTGTTGTGGCCACCT  100

seq1  CAGATGTTGATATAAAACAAGGAGAGACAGAGAGAGGCACATTCTATTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGTTGATATAAAACAAGGAGAGACAGAGAGAGGCACATTCTATTTA  150

seq1  AATAATCAAACCAAATCCAAGTGCTCGTACGCCACAGCTGCTTGGGGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATCAAACCAAATCCAAGTGCTCGTACGCCACAGCTGCTTGGGGGAA  200

seq1  AACAGTTCCAGCTTCTTGCCTTCTTCCAACTGGGGGCCCTCTGGCTTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTTCCAGCTTCTTGCCTTCTTCCAACTGGGGGCCCTCTGGCTTCCC  250

seq1  CAAACCTGTGTGTGTCTTCTGGCTTTCACTTAGAAGAGAAGACACTGGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCTGTGTGTGTCTTCTGGCTTTCACTTAGAAGAGAAGACACTGGTC  300

seq1  TTTGCCTTCTGGCTGATCAGCCCAATCAAGCAAGGCACCTTGTCCAAAGG  350
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTTGCCTTCTGGCTGATCAGCCCAATCAAGCAAGGTACCTTGTCCAAAGG  350

seq1  TGAGGTTGTGGCTTCATCATCCAAATGATACTTTGTGTTTCAGAGTGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTTGTGGCTTCATCATCCAAATGATACTTTGTGTTTCAGAGTGCCT  400

seq1  GCAAATGTACTGTCATTGTCAGAGAAAAAATTTAAACTCTTTGGTCTGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATGTACTGTCATTGTCAGAGAAAAAATTTAAACTCTTTGGTCTGGG  450

seq1  ACTCAGGGACAGAATCCATAATTTCATGACTTCCTCTCAAGACTGTTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGGACAGAATCCATAATTTCATGACTTCCTCTCAAGACTGTTCTC  500

seq1  ATGTTGTACAAGTTCCTGCCCAAACAAATCACCTACA-TTTTTTTCTGGA  549
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATGTTGTACAAGTTCCTGCCCAAACAAATCACCTACATTTTTTTTCTGGA  550

seq1  ATCTCCTGCTCATTTGTGTCTGTCAATGCAGCAGTGGGTCTACCTCTCTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCTGCTCATTTGTGTCTGTCAATGCAGCAGTGGGTCTACCTCTCTA  600

seq1  CCCTTTGTTGCTGTTGTTGTTACATTTATTCTCTCCTACAAACAATGCTA  649
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CCCTTTGTTGCTGTTGTTGTTACATTTATTCTCTTCTACAAACAATGCTA  650

seq1  CAGATACTTTTGTAGAAGCTGAGCACTGGAAAGTTTCATTGGAAGCTTCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATACTTTTGTAGAAGCTGAGCACTGGAAAGTTTCATTGGAAGCTTCA  700

seq1  TATCCTGCCCCTGTGGCTAGGAGCTGTTCTTGACATCTGCTCTAAGTCTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTGCCCCTGTGGCTAGGAGCTGTTCTTGACATCTGCTCTAAGTCTT  750

seq1  GCCTCTCCGCCTCCCCAAGCTGTTCTTGCTCTAGGACTGCACTGAACTGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTCCGCCTCCCCAAGCTGTTCTTGCTCTAGGACTGCACTGAACTGT  800

seq1  AGGAGCATAAGTCATCTGGAGAGTTAGTATTAAATGGGAAACTTCAGGGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCATAAGTCATCTGGAGAGTTAGTATTAAATGGGAAACTTCAGGGG  850

seq1  ACCAGCAGGATGGCTCAGTTGGTCAAGGCGCTCTGCTACTGAGTCTGATG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCAGGATGGCTCAGTTGGTCAAGGCGCTCTGCTACTGAGTCTGATG  900

seq1  ACCTGAGTTTGATTCCTGGAACTCATATGGCAGAGAGAGAGAGAGAGAGA  949
      |||||||||||||||||||||||||||||||| |||||||||        
seq2  ACCTGAGTTTGATTCCTGGAACTCATATGGCAAAGAGAGAGA--------  942

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGAGAG  999
                   ||||||| ||||||||||| ||||| ||||  || | 
seq2  -------------AGAGAGA-AGAGAGAGAGA-AGAGA-AGAG--GAAAA  974

seq1  AACTGACCTT-CACGTGCATGAG-TTTGTA-CGCATGAGT-GAGAGT-GG  1044
       ||||||||| |||||||||||| ||||||  |||||||| |||||| ||
seq2  TACTGACCTTCCACGTGCATGAGTTTTGTATTGCATGAGTGGAGAGTGGG  1024

seq1  GAGAATAAATGGGAAAAAT--ACACAT-GTAGAAAGAAG-TGAGACAGGA  1090
      |||||||| ||||||||||   ||||| |||||||| || ||||||||  
seq2  GAGAATAACTGGGAAAAATTACCACATGGTAGAAAGGAGTTGAGACAG--  1072

seq1  AGT-CACACAGTCTTCCTTTTCACCAGTCTCTGTGG  1125
      ||| ||| ||||||||||||||||||||||||||||
seq2  AGTCCACCCAGTCTTCCTTTTCACCAGTCTCTGTGG  1108