BAC Information

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BAC

Clone NameB6Ng01-248G07
Chromosome8 (Build37)
Map Location 46,082,964 - 46,084,063
singlet/doubletsinglet
Overlap geneFat1
Upstream geneLOC100039508
Downstream geneLOC100039673, Mtnr1a, EG622523, F11, Klkb1, Cyp4v3, BC035537, Tlr3, Sorbs2, Pdlim3, Ccdc110, 1700029J07Rik, 1810047C23Rik, Ankrd37
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-248G07.bB6Ng01-248G07.g
ACCGA056484GA056485
length1,1591,099
definitionB6Ng01-248G07.b B6Ng01-248G07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggccaatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattctaccagagaactcctaaacc
tgataaacagtttcggtgaagtagctggatataaaataaactcaaacaag
tcaatggcctttctctatacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaatagtataaaatatcttggcg
tgactctaactaaggaggtgaaagatctgtatgataaaaacttcaaatct
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggataaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
taggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctttactacagagctattgtgataaaaactgca
tggtactggtatagagacagacaagtagaccaatggaacagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag
ctaaaaccatccagtggaagaaagacagcattttcaacaattggtgctgg
tacactggttgttatcgtgtagaaaatgcgaatcgatccatacttattct
cttgtactagtcaatctaagggatcagaacttcacataaaccagagaaca
ctgaactatagagggagaagtgggcaaagctggaagaattcgtcacagga
gatctggaaccgacgcatgctgaactgtagatcggaatactattggaact
taatgtact
gaattcacttaactcgaactttcagaggtccgcagaaaacactaataaaa
ttaatcagacggtcactctgaagccacacaaggaggggctgaggtcagta
tcgcccgcttttcttctgcttttacatctgttctgcgagctgtttcctgg
tggaaattagtggtttcagaacacaagatcagaaggcaaatcaattttgc
tgtgaattaattgtttttagtattctatataagttatgtaggagggaagg
aggcctggagggagggaaagcactcaatcaactgtaaggttaatatctaa
ggttaacatcggcaaacttcaacgaaagcatcttaagtgcaaaatcttac
atgtactttagtcactgacgttcagtgacctagaatcgcagaattctcct
tgatccaactgaccctaaggatcccacgaaaacagatttgatggggggaa
aaatgcaccagataaggcaggagataaaacctgacttttaagactttaga
ggtaatacatttcaccataaaataaaaactagtaatgagaaatagatttt
aaaaaagtctatagcccttaaaatacacgaaggtgactttctgttgttgt
tgttaatgaatccctgccattgtggcgtgagtggcctttcagttccttcc
tttctagagctatcaaatgttacaccggaaaccctcggaagttgtttgcg
gctgtaactacttcctattgaactgtgttaggtctcctttccagccacaa
taaaatgccattttcttattgcctcattactcagtaatacaagactcact
tactaaaggagcatgcagctagaatgcgattaggtgcccagtatatctac
tacccactgcagtattctgcagtgattaagaacgctcggtttgtcgatta
ctaaatgtaaatattctaatttccactaaatctgttgtaatcttctactg
aacagtcacaaccatcccttatatacccgacaacagaatagctctttatg
aaatactctatttctacatgtaagcaggaaatcagagccctgttaatatg
gtgtctctaaaagcacaacaatgttaaatgtagtctttttgagatatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_46082964_46084063
seq2: B6Ng01-248G07.g_64_1162 (reverse)

seq1  TCATA-CTCAAAAGGACTACATTATACATTTGTTGTGCTTTTAGGAGAAC  49
      ||||| ||||||| |||||||||  ||| |||||||||||||| ||| ||
seq2  TCATATCTCAAAAAGACTACATTTAACA-TTGTTGTGCTTTTA-GAG-AC  47

seq1  ACCAATATACAAGGGCCTCTGATTTCCTTGCTTACATGTAG-AATAGAGT  98
      ||| ||||  |  || ||||||||||| ||||||||||||| ||||||||
seq2  ACC-ATATTAACAGGGCTCTGATTTCC-TGCTTACATGTAGAAATAGAGT  95

seq1  ATTTCATAAAGAGCTA-TCTG-TGTCGGGTATATAAGGGATGG-TGTGAC  145
      |||||||||||||||| |||| ||||||||||||||||||||| ||||||
seq2  ATTTCATAAAGAGCTATTCTGTTGTCGGGTATATAAGGGATGGTTGTGAC  145

seq1  TGTTCAGTAGAAGATTACAAACAGATTTAGTGGAAA-TAGAATATTTACA  194
      |||||||||||||||||| ||||||||||||||||| |||||||||||||
seq2  TGTTCAGTAGAAGATTAC-AACAGATTTAGTGGAAATTAGAATATTTACA  194

seq1  TTTAGTAATCGACAAACCGAGCGTTCTTTAATCACTGCAGAATACTGCAG  244
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTTAGTAATCGACAAACCGAGCGTTC-TTAATCACTGCAGAATACTGCAG  243

seq1  TGGGTAGTAGATATACTGGGCACCTAATCGCATTCTAGCTGCATGCTCCT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTAGTAGATATACTGGGCACCTAATCGCATTCTAGCTGCATGCTCCT  293

seq1  TTAGTAAGTGAGTCTTGTATTACTGAGTAATGAGGCAATAAGAAAATGGC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAAGTGAGTCTTGTATTACTGAGTAATGAGGCAATAAGAAAATGGC  343

seq1  ATTTTATTGTGGCTGGAAAGGAGACCTAACACAGTTCAATAGGAAGTAGT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTGTGGCTGGAAAGGAGACCTAACACAGTTCAATAGGAAGTAGT  393

seq1  TACAGCCGCAAACAACTTCCGAGGGTTTCCGGTGTAACATTTGATAGCTC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCCGCAAACAACTTCCGAGGGTTTCCGGTGTAACATTTGATAGCTC  443

seq1  TAGAAAGGAAGGAACTGAAAGGCCACTCACGCCACAATGGCAGGGATTCA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGGAAGGAACTGAAAGGCCACTCACGCCACAATGGCAGGGATTCA  493

seq1  TTAACAACAACAACAGAAAGTCACCTTCGTGTATTTTAAGGGCTATAGAC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAACAACAACAGAAAGTCACCTTCGTGTATTTTAAGGGCTATAGAC  543

seq1  TTTTTTAAAATCTATTTCTCATTACTAGTTTTTATTTTATGGTGAAATGT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAAAATCTATTTCTCATTACTAGTTTTTATTTTATGGTGAAATGT  593

seq1  ATTACCTCTAAAGTCTTAAAAGTCAGGTTTTATCTCCTGCCTTATCTGGT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACCTCTAAAGTCTTAAAAGTCAGGTTTTATCTCCTGCCTTATCTGGT  643

seq1  GCATTTTTCCCCCCATCAAATCTGTTTTCGTGGGATCCTTAGGGTCAGTT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTTTCCCCCCATCAAATCTGTTTTCGTGGGATCCTTAGGGTCAGTT  693

seq1  GGATCAAGGAGAATTCTGCGATTCTAGGTCACTGAACGTCAGTGACTAAA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCAAGGAGAATTCTGCGATTCTAGGTCACTGAACGTCAGTGACTAAA  743

seq1  GTACATGTAAGATTTTGCACTTAAGATGCTTTCGTTGAAGTTTGCCGATG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATGTAAGATTTTGCACTTAAGATGCTTTCGTTGAAGTTTGCCGATG  793

seq1  TTAACCTTAGATATTAACCTTACAGTTGATTGAGTGCTTTCCCTCCCTCC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCTTAGATATTAACCTTACAGTTGATTGAGTGCTTTCCCTCCCTCC  843

seq1  AGGCCTCCTTCCCTCCTACATAACTTATATAGAATACTAAAAACAATTAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTCCTTCCCTCCTACATAACTTATATAGAATACTAAAAACAATTAA  893

seq1  TTCACAGCAAAATTGATTTGCCTTCTGATCTTGTGTTCTGAAACCACTAA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAGCAAAATTGATTTGCCTTCTGATCTTGTGTTCTGAAACCACTAA  943

seq1  TTTCCACCAGGAAACAGCTCGCAGAACAGATGTAAAAGCAGAAGAAAAGC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCACCAGGAAACAGCTCGCAGAACAGATGTAAAAGCAGAAGAAAAGC  993

seq1  GGGCGATACTGACCTCAGCCCCTCCTTGTGTGGCTTCAGAGTGACCGTCT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCGATACTGACCTCAGCCCCTCCTTGTGTGGCTTCAGAGTGACCGTCT  1043

seq1  GATTAATTTTATTAGTGTTTTCTGCGGACCTCTGAAAGTTCGAGTTAAGT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAATTTTATTAGTGTTTTCTGCGGACCTCTGAAAGTTCGAGTTAAGT  1093

seq1  GAATTC  1100
      ||||||
seq2  GAATTC  1099