BAC Information

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BAC

Clone NameB6Ng01-249A21
Chromosome8 (Build37)
Map Location 25,456,787 - 25,457,822
singlet/doubletsinglet
Overlap genenone
Upstream geneSfrp1, LOC100040931, Zmat4
Downstream gene1810011O10Rik, Indol1, Indo, Adam18, Adam3, Adam5, Adam32, Adam9, Tm2d2, Htra4, Plekha2, LOC100042390, Tacc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-249A21.bB6Ng01-249A21.g
ACCGA056975GA056976
length1,0291,206
definitionB6Ng01-249A21.b B6Ng01-249A21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccctgcctagtgcacttccttccagccacctgctgattcctctg
catctacccactgttcctcagaaagttgtaattatttcctttcctttttt
tttttcccctgcattttactttcagatgctgcccagagcatagatattct
cttaaacctcaggactagccttcctctgtctttttttttttttttaaaga
tttatttatttattatatgtaagtacattgtagctgtcctcagacactcc
agaagagggagtcagatctcgttacggatggttgtgagccaccatgtggt
tgctgggatttgaactccggaccttcggaagagcagtcgggtgctcttac
ccactgagccatctcaccagcccctctgtcttctttttaatctccctgtc
cctacagtatgactgcctgctgccaggtggctgacctctgagccacctta
tctcatgcagtatgactttggttccttctcctttccccttcttccttcca
agtacccatgagatttacagcttgcctgccccttaggttttccttttaaa
cgctaataaactgtcttcaagcttctcccagagtctgatttctgtccttg
agtttctatttgtgtccttccttaaattcttttattaatgagactaagaa
ccccaagaggggctctaatttcccaggtatcatataacaagggctctgtt
agaactcccacaagatccccagcaaggcctccttccagctttttaactct
ttaattggcagtgagaaagagctctctcctgcatccctaggcagtatcag
ctggttgtgggtagacccagctggttgtggttagacccagctggttgtgg
ttagacccagctggttgtgggtagacccatggttgaaaaattgggttgcc
tttaaaacagtgacatctttattgtttttttttaacataaattaaatact
caaaaagagcctatacattaaaacctttctagaaccagtctttattttga
catcactaactacttctcacccattgctt
gaattctcacccgaggaataccgaaagactgagaaacacctgaaaaaatg
ttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccgttgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcagttcctcc
gaaaattggacatagtactacaggaggatccagcaatacctctcctgagc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttgtaatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacaaaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgagtttatgaaattcttaggcaa
atggatggacctggagggcatcattctgagtgaggtaacccaatcacaga
agaactcaaatgatatgtactcactgataagtggatattagcccagaaac
ttagaatacccaagatactagatacaatttgcaaaacacatgaaagtcaa
gaggaacgaagacgaaaatgtggacattttgtccttcttagaattgggaa
caaaacacccatgaaaggagttatagagacaaagattggagctgagacga
aaggatggaccatctagagaccgccataccaggggatccatcccataatc
agcctcaaaatgctgacaccattgcacacactagcaagattttgctgaaa
ggaccctgatatagctgtctcttgtgagactatgctggggcctagcaaac
acagaagtggatgctcacagtcagctattcgatggatcacatgaccccca
atggaggagctagattaagtacccaaggagctaaagggtctgcacctata
cgtggaataaaaatatgaactaaccagtaccccccatgagctcgtgttct
tctagctgcagatgttatcagaagatgatgtagtcgccaatcagtgcaaa
gagaaggccatttgtctttgaaactctttaatggccttagtcagaaatgt
caggccctaagaaatgtggaaagttgggctgcgcgctatcatccttcata
cttatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_25456787_25457822
seq2: B6Ng01-249A21.b_47_1075 (reverse)

seq1  AAGCAATGGGTGGAGAGTAGGTTTAGTGGATGTCAAAAATAAAGACTTGG  50
      ||||||||||||   |||||  ||||| |||||| ||||||||||| |||
seq2  AAGCAATGGGTGAGAAGTAG--TTAGT-GATGTC-AAAATAAAGAC-TGG  45

seq1  TTCTAGAAAGGTTTTAATGTATAGGCTCTTTTTGAGTATTTAATTTATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGAAAGGTTTTAATGTATAGGCTCTTTTTGAGTATTTAATTTATGT  95

seq1  TAAAAAAAAACAATAAAGATTGTCACTGTTTTTAAAGGCAACCCAATTTT  150
      ||||||||||||||||||| |||||||| |||||||||||||||||||||
seq2  TAAAAAAAAACAATAAAGA-TGTCACTG-TTTTAAAGGCAACCCAATTTT  143

seq1  TCAACCATGGGTCTACCCACAACCAGCTGGGTCTAACCACAACCAGCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCATGGGTCTACCCACAACCAGCTGGGTCTAACCACAACCAGCTGG  193

seq1  GTCTAACCACAACCAGCTGGGTCTACCCACAACCAGCTGATACTGCCTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAACCACAACCAGCTGGGTCTACCCACAACCAGCTGATACTGCCTAG  243

seq1  GGATGCAGGAGAGAGCTCTTTCTCACTGCCAATTAAAGAGTTAAAAAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCAGGAGAGAGCTCTTTCTCACTGCCAATTAAAGAGTTAAAAAGCT  293

seq1  GGAAGGAGGCCTTGCTGGGGATCTTGTGGGAGTTCTAACAGAGCCCTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGAGGCCTTGCTGGGGATCTTGTGGGAGTTCTAACAGAGCCCTTGT  343

seq1  TATATGATACCTGGGAAATTAGAGCCCCTCTTGGGGTTCTTAGTCTCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGATACCTGGGAAATTAGAGCCCCTCTTGGGGTTCTTAGTCTCATT  393

seq1  AATAAAAGAATTTAAGGAAGGACACAAATAGAAACTCAAGGACAGAAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAGAATTTAAGGAAGGACACAAATAGAAACTCAAGGACAGAAATC  443

seq1  AGACTCTGGGAGAAGCTTGAAGACAGTTTATTAGCGTTTAAAAGGAAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCTGGGAGAAGCTTGAAGACAGTTTATTAGCGTTTAAAAGGAAAAC  493

seq1  CTAAGGGGCAGGCAAGCTGTAAATCTCATGGGTACTTGGAAGGAAGAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGGGCAGGCAAGCTGTAAATCTCATGGGTACTTGGAAGGAAGAAGG  543

seq1  GGAAAGGAGAAGGAACCAAAGTCATACTGCATGAGATAAGGTGGCTCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGAGAAGGAACCAAAGTCATACTGCATGAGATAAGGTGGCTCAGA  593

seq1  GGTCAGCCACCTGGCAGCAGGCAGTCATACTGTAGGGACAGGGAGATTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGCCACCTGGCAGCAGGCAGTCATACTGTAGGGACAGGGAGATTAA  643

seq1  AAAGAAGACAGAGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGACAGAGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCGA  693

seq1  CTGCTCTTCCGAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTTCCGAAGGTCCGGAGTTCAAATCCCAGCAACCACATGGTGGCT  743

seq1  CACAACCATCCGTAACGAGATCTGACTCCCTCTTCTGGAGTGTCTGAGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACCATCCGTAACGAGATCTGACTCCCTCTTCTGGAGTGTCTGAGGA  793

seq1  CAGCTACAATGTACTTACATATAATAAATAAATAAATCTTTAAAAAAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTACAATGTACTTACATATAATAAATAAATAAATCTTTAAAAAAAAA  843

seq1  AAAAAAGACAGAGGAAGGCTAGTCCTGAGGTTTAAGAGAATATCTATGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGACAGAGGAAGGCTAGTCCTGAGGTTTAAGAGAATATCTATGCT  893

seq1  CTGGGCAGCATCTGAAAGTAAAATGCAGGGGAAAAAAAAAAAGGAAAGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCAGCATCTGAAAGTAAAATGCAGGGGAAAAAAAAAAAGGAAAGGA  943

seq1  AATAATTACAACTTTCTGAGGAACAGTGGGTAGATGCAGAGGAATCAGCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTACAACTTTCTGAGGAACAGTGGGTAGATGCAGAGGAATCAGCA  993

seq1  GGTGGCTGGAAGGAAGTGCACTAGGCAGGGGAATTC  1036
      ||||||||||||||||||||||||||||||||||||
seq2  GGTGGCTGGAAGGAAGTGCACTAGGCAGGGGAATTC  1029