BAC Information

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BAC

Clone NameB6Ng01-249D23
Chromosome8 (Build37)
Map Location 4,663,252 - 4,664,395
singlet/doubletsinglet
Overlap genenone
Upstream gene1810033B17Rik, LOC664858, Trappc5, Fcer2a, Clec4g, Cd209a, LOC664870, Cd209e, Cd209d, Cd209b, Cd209c, LOC664888, EG384770, EG664905, LOC664915, LOC664922, LOC631071, Cd209f, Cd209g, B130050I23Rik, BC068157, Lrrc8e, Map2k7, LOC100039590, Snapc2, Ctxn1, Timm44, Elavl1, Ccl25, LOC664977, Ppia-ps8_36.1, Lass4, Vmn2r-ps89, EG633533, BC003267, LOC665021, EG623133
Downstream geneEG665044, EG623223, LOC100040234, Shcbp1, EG622568, LOC669393, EG631359, LOC100039687, LOC436026, Slc10a2, LOC434275, LOC623409, LOC669429
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-249D23.bB6Ng01-249D23.g
ACCGA057118GA057119
length5001,141
definitionB6Ng01-249D23.b B6Ng01-249D23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacatgatatgtactcactgataagtggatattagcccagaaact
tagaatatccaaaatataagatacaatttgcgaaacacatgaaactcaag
aagaatgaagaccatttgctccttcttagaattgggaacaaaacacccat
ggaaggagttacagagacattttggagctgagacaaaaggatggaccatc
tagagactgccatacctggggatctatctcataatcagcctccaaacgct
gacaccattgcatacactagcaagattttgctgaaaggaccctgatatag
ctgtctcttttgagactatgccggggcctggcaaacacagaagtggatgc
ttacagtcagctattggatggatcacagggcccccaatggaggagctaga
gaacgtacccaaggagctaaagggatctgcaaccctataggtggaacaac
aatatgaactaaccagtaccctggtgctcttggctctagctgcatatgta

gaattcatgaggcagagggtccagtgtccagtgcctcctaatttactgtg
tgatacacatctgatctttctgatctttcatttacaaagtaaacaaaaga
tcactgggcactggcagttctcaaaggtaggctccctggagagtggccac
tactcactccacatgcagcagtactggaatgaggcaggcttaccttctgt
tccgtggttaacaccctacacacataaacagtgaattcctattcttggat
ctgtatactgattctatttcagtcttgcatgtgtttgctttcgatggggt
ctcgcataactgaggctggccttggatttattatgcagctgaggatggcg
tgaacttctgacctcctgattctaacttccaaagatacagaaccagcata
ccaaatttttgcaattcaagagtttaaacttgttaggtaaacactcaact
acagaactatgcattcagagcctcacaggtgacaggaaaatggagatacc
taaaatgatggatttgattctttagtcttggagttggcagcagtcatcat
catcatgtgataaagtgaagtacaacatcaggagaaaataagttctaacc
agcaacaacagactactggtatccctcaacacatgtggcaaaacatctaa
gtagcagcctaggcttggaactggacaggctgtctattgtagtagctctg
taccaaaacttgacatatacattcagagtcaatgtactatgagagacatt
aactaaaagttttaacagtccttccatatcccaaggagtgtgtgtgtgca
ctcgtgcgtgtgtgcacccacatccaaacattcatgtattcagcagtgtg
taaattggtacaaaatcatatttttaaacacagttatattttatacaaaa
ttacagagccactttaatgctttgagtatttgttatagtcaatttgtgtt
tacgtaagtttactattcatgtccttggataaatagatcattgttgggac
tctacaaagttgtagactatgaaatctagcctctttgaactgtggggcac
acagcatcaaatggggagactggagcagccaacactgctttcaaggaatt
gccatgtaagctctggccagctctctgccttccttgtctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_4663252_4664395
seq2: B6Ng01-249D23.g_64_1204

seq1  GAATTCATGAGGCAGAGGGTCCAGTGTCCAGTGCCTCCTAATTTACTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGAGGCAGAGGGTCCAGTGTCCAGTGCCTCCTAATTTACTGTG  50

seq1  TGATACACATCTGATCTTTCTGATCTTTCATTTACAAAGTAAACAAAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACACATCTGATCTTTCTGATCTTTCATTTACAAAGTAAACAAAAGA  100

seq1  TCACTGGGCACTGGCAGTTCTCAAAGGTAGGCTCCCTGGAGAGTGGCCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGGGCACTGGCAGTTCTCAAAGGTAGGCTCCCTGGAGAGTGGCCAC  150

seq1  TACTCACTCCACATGCAGCAGTACTGGAATGAGGCAGGCTTACCTTCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCACTCCACATGCAGCAGTACTGGAATGAGGCAGGCTTACCTTCTGT  200

seq1  TCCGTGGTTAACACCCTACACACATAAACAGTGAATTCCTATTCTTGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTGGTTAACACCCTACACACATAAACAGTGAATTCCTATTCTTGGAT  250

seq1  CTGTATACTGATTCTATTTCAGTCTTGCATGTGTTTGCTTTCGATGGGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATACTGATTCTATTTCAGTCTTGCATGTGTTTGCTTTCGATGGGGT  300

seq1  CTCGCATAACTGAGGCTGGCCTTGGATTTATTATGCAGCTGAGGATGGCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGCATAACTGAGGCTGGCCTTGGATTTATTATGCAGCTGAGGATGGCG  350

seq1  TGAACTTCTGACCTCCTGATTCTAACTTCCAAAGATACAGAACCAGCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTTCTGACCTCCTGATTCTAACTTCCAAAGATACAGAACCAGCATA  400

seq1  CCAAATTTTTGCAATTCAAGAGTTTAAACTTGTTAGGTAAACACTCAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATTTTTGCAATTCAAGAGTTTAAACTTGTTAGGTAAACACTCAACT  450

seq1  ACAGAACTATGCATTCAGAGCCTCACAGGTGACAGGAAAATGGAGATACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAACTATGCATTCAGAGCCTCACAGGTGACAGGAAAATGGAGATACC  500

seq1  TAAAATGATGGATTTGATTCTTTAGTCTTGGAGTTGGCAGCAGTCATCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGATGGATTTGATTCTTTAGTCTTGGAGTTGGCAGCAGTCATCAT  550

seq1  CATCATGTGATAAAGTGAAGTACAACATCAGGAGAAAATAAGTTCTAACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATGTGATAAAGTGAAGTACAACATCAGGAGAAAATAAGTTCTAACC  600

seq1  AGCAACAACAGACTACTGGTATCCCTCAACACATGTGGCAAAACATCTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACAACAGACTACTGGTATCCCTCAACACATGTGGCAAAACATCTAA  650

seq1  GTAGCAGCCTAGGCTTGGAACTGGACAGGCTGTCTATTGTAGTAGCTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCAGCCTAGGCTTGGAACTGGACAGGCTGTCTATTGTAGTAGCTCTG  700

seq1  TACCAAAACTTGACATATACATTCAGAGTCAATGTACTATGAGAGACATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAAAACTTGACATATACATTCAGAGTCAATGTACTATGAGAGACATT  750

seq1  AACTAAAAGTTTTAACAGTCCTTCCATATCCCAAGGAGTGTGTGTGTGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAAAGTTTTAACAGTCCTTCCATATCCCAAGGAGTGTGTGTGTGCA  800

seq1  CTCGTGCGTGTGTGCACCCACATCCAAACATTCATGTATTCAGCAGTGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTGCGTGTGTGCACCCACATCCAAACATTCATGTATTCAGCAGTGTG  850

seq1  TAAATTGGTACAAAATCATATTTTTAAACACAGTTATATTTTATACAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTGGTACAAAATCATATTTTTAAACACAGTTATATTTTATACAAAA  900

seq1  TTACAGAGCCACTTTAATGCTTTGAGTATTTGTTATAGTCAATTTGTGTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGAGCCACTTTAATGCTTTGAGTATTTGTTATAGTCAATTTGTGTT  950

seq1  TACGTAAGTTTTACTATTCATGTCCTTGGATAAATAGATCATTGTTGGGA  1000
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TACGTAAG-TTTACTATTCATGTCCTTGGATAAATAGATCATTGTTGGGA  999

seq1  CTCTACAAAGTTGTAGACTAATGAAATCTAGCCTCTTTGAACTGTTGGGG  1050
      ||||||||||||||||||| |||||||||||||||||||||||| |||||
seq2  CTCTACAAAGTTGTAGACT-ATGAAATCTAGCCTCTTTGAACTG-TGGGG  1047

seq1  CACACAGCATCAAAT-GGGAGACTGGAGCAGCAAACACGGCTTTTCAAGA  1099
      ||||||||||||||| |||||||||||||||| ||||| || ||||||| 
seq2  CACACAGCATCAAATGGGGAGACTGGAGCAGCCAACACTGC-TTTCAAGG  1096

seq1  AATGCCCATGT-AGCTCTGGCCAGCTCTCTGCTTTCCTCTGTCTGG  1144
      |||  |||||| |||||||||||||||||||| ||||| |||||||
seq2  AATTGCCATGTAAGCTCTGGCCAGCTCTCTGCCTTCCT-TGTCTGG  1141