BAC Information

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BAC

Clone NameB6Ng01-250C16
Chromosome8 (Build37)
Map Location 34,036,247 - 34,037,360
singlet/doubletsinglet
Overlap geneLOC100042715
Upstream gene2010007E15Rik, EG666589, EG546052
Downstream geneLOC628408, EG628412, Wrn, Purg, LOC666630, Hmgb1-rs17, Tex15, Ppp2cb, Ubxd6, Gsr, Gtf2e2, Rbpms, LOC100042769
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250C16.bB6Ng01-250C16.g
ACCGA057789GA057790
length1,1141,229
definitionB6Ng01-250C16.b B6Ng01-250C16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatttaaaatttcattagggagctgactgtatgcaggatgatac
gtgcatataaggaattctccacaataataatgagaactataaaccggtga
caaggaaaactattccaaacttgttaatgaaaagagtaagtaaggaatga
tgggtgtgatactctcctgtgtacattccaaaggctgcatatagatgctt
aactgtaaggagaattttctaatatttgagaagaacttaccttaggccag
tatctttaaattaaattaaagttgctcagaaatgagctattagacttaag
atattattgcactgtaaattcgttgggaaatttaattatggaaactaaca
gcaaagagagattagacagtttgtacaattattcacttagtaatattcca
aaaggaaaagtatttatgtaataatgtaagttgaggtacttctagaactg
accacacacacacacacacacacacacacacagaattccagaagctaata
tctaaatttatagttttcataaatatcaccaatcaaataacacaggacaa
attcataaaatctatacctcaatgtatggaatcatctcagagtcaaaagg
ctttgggaacagtgcaaacaatttttctacactcaaaaggaacaataaag
agttgaaatcccctatgcatgcttctgcaggttgtgagtaagggattcat
cccccatcggtagaaagtgtggacaatttgcagcgtaaatctacagcttc
tttagtcatggctggcacaggaattaaacatccaggagagttaagagaat
tgactctactactaagttactggatttaaaatccaatctgacatagcaac
aacaaaataataaaaggcacgaaatacataatatggcaatggcttatgaa
tgcctggcagtgtggaaaacaatctcttagatgcagttttctgtaccagc
agccagattgaaatctgaggggcatcaggtagctcaccggagctgttttg
tctagcattgagaaaatagttcgctgtagaagtaaatgcaatgctggtcc
tgcaattacaattcttactacagatgaaaaagaatcggacttatttccat
tagctgaactgcat
gaattctttctcataagaccaagagcacatgtaagattgagaatcgacaa
atgggacctcataaaattgcaaagcttctgtaaggcaaaggacactgtca
aaaagacaaaaaggccaccaacagattggaaaaagatctttaccaatcct
aatcttatagggggctaatatccaatatatacaaataactcaagaagtta
ggctccagagaaacaaataaccatattaaaaatggggtacagagctaaac
aaagaaccattaactaaggaatacagaatggctgaggagcacttaaaaaa
atgttcaacatccttagtcatcagggaaatgcaaatcaaaacaaccctga
gattctatctcacacctgtcagaatggctaagatcaaaaactcaggtgac
agcagatgctgactaggatgtggagaaagaggaacacttctccattgctg
gtgggattgcaagctggtacaaccactctgaaaatcagtctagtggttca
acagaaaataagacatagtactacctgaggacccagcaataccactcatg
ggcatatacccagaagatgctccaatatgtaataaggacacatgctccac
tatgttcatagcagccttatttataatagccagaagctggaaagaaccca
gatgtcccttaacaaaggaatggatacagaaaatgtggtacatttataca
atggagtactactcagctattaaaaacaatgaatttatgaaattcttagg
caaatggatggatctggaggatattatcctgggtgaggtgacccaaccac
aaaagaactcaaataatatgtactcactgataagtggatatttagcctag
aagttcagaatgctcaagatacatttcacaaaccacattgaaactcaaga
agaaggaaggaccaaagtgtggatacttcaatcttttctagagagggaac
aaaatatccatggaaggagttacagggaacaaagtgtggagcagatgact
gaaggaacggccattcaaagacttgacctaactgggaatctattcccaat
acagtcatcaaacccgacacctatggtggatgccaactaggtgcttgctt
ggcaggagcctgaaattagctgtccctgggaaggctcgtgcaagtggcct
taacaataccgactgggatgtttccaatgcaccattggcacggtaccaca
gagttcttttccactgaagggaagcctat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_34036247_34037360
seq2: B6Ng01-250C16.b_44_1157

seq1  GAATTCTATTTAAAATTTCATTAGGGAGCTGACTGTATGCAGGATGATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTTAAAATTTCATTAGGGAGCTGACTGTATGCAGGATGATAC  50

seq1  GTGCATATAAGGAATTCTCCACAATAATAATGAGAACTATAAACCGGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATATAAGGAATTCTCCACAATAATAATGAGAACTATAAACCGGTGA  100

seq1  CAAGGAAAACTATTCCAAACTTGTTAATGAAAAGAGTAAGTAAGGAATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAAAACTATTCCAAACTTGTTAATGAAAAGAGTAAGTAAGGAATGA  150

seq1  TGGGTGTGATACTCTCCTGTGTACATTCCAAAGGCTGCATATAGATGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGTGATACTCTCCTGTGTACATTCCAAAGGCTGCATATAGATGCTT  200

seq1  AACTGTAAGGAGAATTTTCTAATATTTGAGAAGAACTTACCTTAGGCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTAAGGAGAATTTTCTAATATTTGAGAAGAACTTACCTTAGGCCAG  250

seq1  TATCTTTAAATTAAATTAAAGTTGCTCAGAAATGAGCTATTAGACTTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTAAATTAAATTAAAGTTGCTCAGAAATGAGCTATTAGACTTAAG  300

seq1  ATATTATTGCACTGTAAATTCGTTGGGAAATTTAATTATGGAAACTAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATTGCACTGTAAATTCGTTGGGAAATTTAATTATGGAAACTAACA  350

seq1  GCAAAGAGAGATTAGACAGTTTGTACAATTATTCACTTAGTAATATTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGAGAGATTAGACAGTTTGTACAATTATTCACTTAGTAATATTCCA  400

seq1  AAAGGAAAAGTATTTATGTAATAATGTAAGTTGAGGTACTTCTAGAACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAAAGTATTTATGTAATAATGTAAGTTGAGGTACTTCTAGAACTG  450

seq1  ACCACACACACACACACACACACACACACACAGAATTCCAGAAGCTAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACACACACACACACACACACACACACACAGAATTCCAGAAGCTAATA  500

seq1  TCTAAATTTATAGTTTTCATAAATATCACCAATCAAATAACACAGGACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATTTATAGTTTTCATAAATATCACCAATCAAATAACACAGGACAA  550

seq1  ATTCATAAAATCTATACCTCAATGTATGGAATCATCTCAGAGTCAAAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATAAAATCTATACCTCAATGTATGGAATCATCTCAGAGTCAAAAGG  600

seq1  CTTTGGGAACAGTGCAAACAATTTTTCTACACTCAAAAGGAACAATAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGGAACAGTGCAAACAATTTTTCTACACTCAAAAGGAACAATAAAG  650

seq1  AGTTGAAATCCCCTATGCATGCTTCTGCAGGTTGTGAGTAAGGGATTCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGAAATCCCCTATGCATGCTTCTGCAGGTTGTGAGTAAGGGATTCAT  700

seq1  CCCCCATCGGTAGAAAGTGTGGACAATTTGCAGCGTAAATCTACAGCTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCATCGGTAGAAAGTGTGGACAATTTGCAGCGTAAATCTACAGCTTC  750

seq1  TTTAGTCATGGCTGGCACAGGAATTAAACATCCAGGAGAGTTAAGAGAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTCATGGCTGGCACAGGAATTAAACATCCAGGAGAGTTAAGAGAAT  800

seq1  TGACTCTACTACTAAGTTACTGGATTTAAAATCCAATCTGACATAGCAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCTACTACTAAGTTACTGGATTTAAAATCCAATCTGACATAGCAAC  850

seq1  AACAAAATAATAAAAGGCACGAAATACATAATATGGCAATGGCTTATGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAATAATAAAAGGCACGAAATACATAATATGGCAATGGCTTATGAA  900

seq1  TGCCTGGCAGTGTGGAAAACAATCTCTTAGATGCAGTTTTCTGTACCAGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGCAGTGTGGAAAACAATCTCTTAGATGCAGTTTTCTGTACCAGC  950

seq1  AGCCAGATTTGAAATCTGAGGGGCATCAGGTAGCTCA-CGGAGCTGTTTT  999
      ||||||| ||||||||||||||||||||||||||||| ||||||||||||
seq2  AGCCAGA-TTGAAATCTGAGGGGCATCAGGTAGCTCACCGGAGCTGTTTT  999

seq1  GTCTTAGCATTGAG-AAATAGTTCGCTGTAG-AGTAAATGCCATGCTGGT  1047
      ||| |||||||||| |||||||||||||||| ||||||||| ||||||||
seq2  GTC-TAGCATTGAGAAAATAGTTCGCTGTAGAAGTAAATGCAATGCTGGT  1048

seq1  CCTGC-ATTACAATTCTTACCTACAAGATGGAAAAAGATCGGAC-TATTT  1095
      ||||| ||||||||||||| |||| ||||| ||||  ||||||| |||||
seq2  CCTGCAATTACAATTCTTA-CTAC-AGATGAAAAAGAATCGGACTTATTT  1096

seq1  CCAATTAGCTGAACTGCAT  1114
      || ||||||||||||||||
seq2  CC-ATTAGCTGAACTGCAT  1114