BAC Information

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BAC

Clone NameB6Ng01-250E16
Chromosome8 (Build37)
Map Location 33,568,088 - 33,569,260
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041329, EG330731, LOC100041340, Nrg1, 2010007E15Rik, EG666589
Downstream geneEG546052, LOC100042715, LOC628408, EG628412, Wrn, Purg, LOC666630
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250E16.bB6Ng01-250E16.g
ACCGA057877GA057878
length1,1751,181
definitionB6Ng01-250E16.b B6Ng01-250E16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaattttaaagttcctgtcttttcaccaggaaaaaaaaactccga
ctgtctgtgtctactcatctatgtcaaagtagttcctaaataaagggcat
tatattcctaaagactgccggctttcaacgtttaacctacgcttctaagc
aaacctcttggtgcttaaatctaaattctaaattttctcacacattaata
atagaaggattgattatgtattttagatatagccaattctctacttcaac
tgcactgaaatcaggctttccagaattattggatgacaatatttgtattt
tcaaaacggaatgagcgaccctaaagcacaagaaagaatttacttattaa
ttgataaactacttatgacaccttaaattatgtaaataatggtgaactat
gtaaattacttaaaccatgtaaatagctgtccacttaaagtaataactat
gaatctgaaatatctaaggctatctgtgaatgcctagggatgactcttat
aattattaatgttataacacctaaagagattgtttgtttttaaatgtttt
ttctccctaaataaaatctgttattcaattctggactctggttcttgcca
aggagttagaccctgggctttaatagtgactagaaagagtctattttctt
aagtctggaggatgggttcttctcaagatgagtacctggaccagagaggg
tgcttaataatgattgttgaattagatacatttctaaaatacataatttt
ggacaaggttccactttgaacatgtacctcagagtcctatagcaaattct
gtgaaaactagaaaccatgcagtttctataagaattgtactaaaaaaaat
cacaataaacaacgctgtgcttgcttccttgctattcagttctttgatgt
aggttccatgctgaagcatccaagaggctaagtagttttgtcccaataaa
tgctttattgctcccatctattagacccatgaaattaagtaaaatttcat
tgaattaggtcatttggagaataagccaaatacaccaaaaaactaaggag
aaacaaaaagcaggctagcacctgtagaatgatgtcagcaaataatctta
ctgtttaagggggtggtatagcctctgtgtgaattaatttatgaatctac
aaatagaacaatttgatgccaaata

gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatctgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccgcataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaggagctagagaaagtagccaaggagctaaagggatctgcaaccct
ataggtgacacattatgagctacagtaccccggagctctgactctagctg
catatatattcaaagatgggcctagtcggcattcactgaaaagaaaggct
caatggaactggcaacctatatggctcaagttacatgaccaggtcaacgg
aatgtgcagggaagtggggcttatctcacgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_33568088_33569260
seq2: B6Ng01-250E16.b_45_1219

seq1  GAATTCAATTTTAAAGTTCCTGTCTTTTCACCAGGAAAAAAAAACTCCGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTTTAAAGTTCCTGTCTTTTCACCAGGAAAAAAAAACTCCGA  50

seq1  CTGTCTGTGTCTACTCATCTATGTCAAAGTAGTTCCTAAATAAAGGGCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTGTGTCTACTCATCTATGTCAAAGTAGTTCCTAAATAAAGGGCAT  100

seq1  TATATTCCTAAAGACTGCCGGCTTTCAACGTTTAACCTACGCTTCTAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTCCTAAAGACTGCCGGCTTTCAACGTTTAACCTACGCTTCTAAGC  150

seq1  AAACCTCTTGGTGCTTAAATCTAAATTCTAAATTTTCTCACACATTAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTCTTGGTGCTTAAATCTAAATTCTAAATTTTCTCACACATTAATA  200

seq1  ATAGAAGGATTGATTATGTATTTTAGATATAGCCAATTCTCTACTTCAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAGGATTGATTATGTATTTTAGATATAGCCAATTCTCTACTTCAAC  250

seq1  TGCACTGAAATCAGGCTTTCCAGAATTATTGGATGACAATATTTGTATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTGAAATCAGGCTTTCCAGAATTATTGGATGACAATATTTGTATTT  300

seq1  TCAAAACGGAATGAGCGACCCTAAAGCACAAGAAAGAATTTACTTATTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAACGGAATGAGCGACCCTAAAGCACAAGAAAGAATTTACTTATTAA  350

seq1  TTGATAAACTACTTATGACACCTTAAATTATGTAAATAATGGTGAACTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAAACTACTTATGACACCTTAAATTATGTAAATAATGGTGAACTAT  400

seq1  GTAAATTACTTAAACCATGTAAATAGCTGTCCACTTAAAGTAATAACTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATTACTTAAACCATGTAAATAGCTGTCCACTTAAAGTAATAACTAT  450

seq1  GAATCTGAAATATCTAAGGCTATCTGTGAATGCCTAGGGATGACTCTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTGAAATATCTAAGGCTATCTGTGAATGCCTAGGGATGACTCTTAT  500

seq1  AATTATTAATGTTATAACACCTAAAGAGATTGTTTGTTTTTAAATGTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTAATGTTATAACACCTAAAGAGATTGTTTGTTTTTAAATGTTTT  550

seq1  TTCTCCCTAAATAAAATCTGTTATTCAATTCTGGACTCTGGTTCTTGCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCCTAAATAAAATCTGTTATTCAATTCTGGACTCTGGTTCTTGCCA  600

seq1  AGGAGTTAGACCCTGGGCTTTAATAGTGACTAGAAAGAGTCTATTTTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTTAGACCCTGGGCTTTAATAGTGACTAGAAAGAGTCTATTTTCTT  650

seq1  AAGTCTGGAGGATGGGTTCTTCTCAAGATGAGTACCTGGACCAGAGAGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTGGAGGATGGGTTCTTCTCAAGATGAGTACCTGGACCAGAGAGGG  700

seq1  TGCTTAATAATGATTGTTGAATTAGATACATTTCTAAAATACATAATTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAATAATGATTGTTGAATTAGATACATTTCTAAAATACATAATTTT  750

seq1  GGACAAGGTTCCACTTTGAACATGTACCTCAGAGTCCTATAGCAAATTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAAGGTTCCACTTTGAACATGTACCTCAGAGTCCTATAGCAAATTCT  800

seq1  GTGAAAACTAGAAACCATGCAGTTTCTATAAGAATTGTACTAAAAAAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAACTAGAAACCATGCAGTTTCTATAAGAATTGTACTAAAAAAAAT  850

seq1  CACAATAAACAACGCTGTGCTTGCTTCCTTGCTATTCAGTTCTTTGATGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATAAACAACGCTGTGCTTGCTTCCTTGCTATTCAGTTCTTTGATGT  900

seq1  AGGTTCCATGCTGAAGCATCCAAGAGGCTAAGGTAG-TTTGTCCCAATAA  949
      ||||||||||||||||||||||||||||||| |||| |||||||||||||
seq2  AGGTTCCATGCTGAAGCATCCAAGAGGCTAA-GTAGTTTTGTCCCAATAA  949

seq1  ATGCTTTATTGCTCCCATCTATTAGACCCATGAAATTAAGTAAAA-TTCA  998
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ATGCTTTATTGCTCCCATCTATTAGACCCATGAAATTAAGTAAAATTTCA  999

seq1  TTGATTTAGGTCATTT-GAGAATAAGGCCAAAATAACAACCAAAAAACTA  1047
      |||| ||||||||||| |||||||||  | |||||   ||||||||||||
seq2  TTGAATTAGGTCATTTGGAGAATAAG--CCAAATA--CACCAAAAAACTA  1045

seq1  A-GAGAAAC-AAAAGCAGGCTAAGCACCTGTAGAATGATGTCAGCAAAT-  1094
      | ||||||| ||||||||||| ||||||||||||||||||||||||||| 
seq2  AGGAGAAACAAAAAGCAGGCT-AGCACCTGTAGAATGATGTCAGCAAATA  1094

seq1  ATCTTACTTGGTTTTAGGGGGTGGTATAG---CTCTGTGGATT-ATTTAT  1140
      ||||||||  |||| ||||||||||||||   || |||| ||| ||||||
seq2  ATCTTACT--GTTTAAGGGGGTGGTATAGCCTCTGTGTGAATTAATTTAT  1142

seq1  GATTCTACAAATAAGACAA-TTGATGCACAAATA  1173
      || ||||||||||  |||| ||||||| ||||||
seq2  GAATCTACAAATAGAACAATTTGATGC-CAAATA  1175


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