BAC Information

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BAC

Clone NameB6Ng01-250L05
Chromosome8 (Build37)
Map Location 30,678,573 - 30,803,524
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042598, Unc5d, LOC100041237
Downstream geneEG628189
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250L05.bB6Ng01-250L05.g
ACCGA058174GA058175
length1,1391,179
definitionB6Ng01-250L05.b B6Ng01-250L05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(30,802,380 - 30,803,524)(30,678,573 - 30,679,744)
sequence
gaattccaacagaaaacgcactctggctaccacaagaaacagtatagtga
atgacctttcttattgaactccccattatacatacatattaagatatcta
caaacttcttgataagaaacttaattcaaattaattgttttaaattagat
atggtagtacgtgtctgcacatctcataaccagagatgagctaaggagtc
ttgaggtgtctgccaaacagagctgtgtaagaagagtctgtctcagaatt
tattaatagtatttacaaaattgctttaaaggaactgagtgaaatagaca
tcagaatagtgaatggtattaggaatatatcacaaagactaaaaacatca
ataagaaaagtagaaacagcaaacactatgctgacgttaaggaacataac
tgatgaactgaaaaattctagatgtaatgtgggaggcaagtttaatcaac
agaaataagacttaggataaagacagataataaaaaaatttccaaaggaa
ccaattcagaaaaggatggactagcataaaaaacccaggtaagctattaa
aattgtcaagtgagataagccctacgattgggagttcaggaaacagagaa
tgaggaagtgatgggaagtttttttagagaaataaaaaaaataaataaaa
ataaaaataaaaaacttacaaaatgtgggataaatttacccaacacaaaa
tctgccttatagaaatgtttttcaagtctttcaggaaaaatgaacagata
ttagcaagttgacaaaagatgagacataaatcaacatggaggtaagattc
agacactctgatgttgtaagggtgttactaaattaactgaaatgcagcaa
aggtgtcttaaaaactattagtatagctgcagcccaataactcatcaatg
aataacctatccctgtaaatatgaggagtgtcaatagcacacagatgagt
gagagattaaaggtggagtcctttactgagagttgtgaccttttaacata
gacagtgtattataaattgctttatagagcctttacagttgtactggcaa
gttttatgttcacctgacacagctggaagttatcacaggagaggagctca
gtggggtagtgcctccagagatcagcctgtagacatttt

gaattcactatttcaaaggctttaaagaatggggtgtgaaatcttctccc
tagtgtacagataggtgtgactgtaattttagctgtaatatatactcagc
agcacaaaactacttttttatttttaatatcatttttcatattcttgaac
atctatttctaaataaagggaaaaggggtgttgatttaatcccaaaatcg
cagacaacttttacaagaaaaatatttttcaagtcatttgctggcaacta
taccatactagctgctggcaattttgctaccttgccaaagactgagaata
aagtgtggaaaaacatattcaaaacagaagccaatatgttaactttaaaa
tgcatagagagaaatgaaacaaaagtctttactatatgctgaaggttata
gaaaatattaggaattgaaagatattgctaggatctgaagtctggaatac
ctgcctgttgtaaagatagaacaaagtataaaggaatccttccattataa
aaagatgtcttagggtttccattgctgtgaagagtcatggctaagtcaac
gagatggcttacaggttcagaggttcccttcattatcagcatgccagtgt
ccaggcaaggactgagagttctttatcttgttccaaaggcaaacagaaga
gtggcatgacagttaggaagagggtctccaagcccattctcaaaataaca
cacttccctcaaagccacacctactccaacaaggacatacctaatattgc
cacaccctggaccaagcataatcaaaccaccccactggatggctcctcag
acagtgctaatgggaaatatttcctattaccacgtatgctagaagtacca
tgaactgcatcataacactctcagaagtagctaatcacctcctgtaatat
gcatcttgcatgagctgaaaagataaaaaaaaatagaaaagacctgaatt
tatgtgaagtcccttgctattttcattgtcttacttcaaaagaagaattt
tccaattataaatgatcatttgaaaatagttgacatgaacccttccattt
tggggacatcaaaatgctgttcttttattgccttattcggtcatgacacc
tcagaacatttgcatgtccaacatgccatgcatgtccttagatccaggga
agtggttgctcacactacttgtgcctgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_30802380_30803524
seq2: B6Ng01-250L05.b_44_1182 (reverse)

seq1  AAAATGTCCTACAGCTGGATCTCCTGGAGGCACTTCCCCACTGAAGCTCC  50
      ||||||| ||||||   ||||| ||||||||||| |||||||| ||||||
seq2  AAAATGT-CTACAGGCTGATCT-CTGGAGGCACTACCCCACTG-AGCTCC  47

seq1  TTTCTCTGTGATAAC-TCCAGCCTGTGTCAAGGTG-ACATAAAACTTGCC  98
      | || |||||||||| ||||| ||||||| ||||| ||||||||||||||
seq2  TCTC-CTGTGATAACTTCCAG-CTGTGTC-AGGTGAACATAAAACTTGCC  94

seq1  AGTACAACTGTAAAGGCTTCTATAAAGCATTTTATAATTACACTTGTCTA  148
      ||||||||||||||||| ||||||||||| ||||||| ||||| ||||||
seq2  AGTACAACTGTAAAGGC-TCTATAAAGCAATTTATAA-TACAC-TGTCTA  141

seq1  TGTTAAAAGGTCACAACTCTCAGTAAAGGACT-CACCTTTAATCTCTCAC  197
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGTTAAAAGGTCACAACTCTCAGTAAAGGACTCCACCTTTAATCTCTCAC  191

seq1  TCATCTGTGTGCTATTGACACTCCTCATATTTACAGGGATAGGTTATTCA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTGTGTGCTATTGACACTCCTCATATTTACAGGGATAGGTTATTCA  241

seq1  TTGATGAGTTATTGGGCTGCAGCTATACTAATAGTTTTTAAGACACCTTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGAGTTATTGGGCTGCAGCTATACTAATAGTTTTTAAGACACCTTT  291

seq1  GCTGCATTTCAGTTAATTTAGTAACACCCTTACAACATCAGAGTGTCTGA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCATTTCAGTTAATTTAGTAACACCCTTACAACATCAGAGTGTCTGA  341

seq1  ATCTTACCTCCATGTTGATTTATGTCTCATCTTTTGTCAACTTGCTAATA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTACCTCCATGTTGATTTATGTCTCATCTTTTGTCAACTTGCTAATA  391

seq1  TCTGTTCATTTTTCCTGAAAGACTTGAAAAACATTTCTATAAGGCAGATT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTCATTTTTCCTGAAAGACTTGAAAAACATTTCTATAAGGCAGATT  441

seq1  TTGTGTTGGGTAAATTTATCCCACATTTTGTAAGTTTTTTATTTTTATTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTGGGTAAATTTATCCCACATTTTGTAAGTTTTTTATTTTTATTT  491

seq1  TTATTTATTTTTTTTATTTCTCTAAAAAAACTTCCCATCACTTCCTCATT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATTTTTTTTATTTCTCTAAAAAAACTTCCCATCACTTCCTCATT  541

seq1  CTCTGTTTCCTGAACTCCCAATCGTAGGGCTTATCTCACTTGACAATTTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTTTCCTGAACTCCCAATCGTAGGGCTTATCTCACTTGACAATTTT  591

seq1  AATAGCTTACCTGGGTTTTTTATGCTAGTCCATCCTTTTCTGAATTGGTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCTTACCTGGGTTTTTTATGCTAGTCCATCCTTTTCTGAATTGGTT  641

seq1  CCTTTGGAAATTTTTTTATTATCTGTCTTTATCCTAAGTCTTATTTCTGT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGGAAATTTTTTTATTATCTGTCTTTATCCTAAGTCTTATTTCTGT  691

seq1  TGATTAAACTTGCCTCCCACATTACATCTAGAATTTTTCAGTTCATCAGT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAAACTTGCCTCCCACATTACATCTAGAATTTTTCAGTTCATCAGT  741

seq1  TATGTTCCTTAACGTCAGCATAGTGTTTGCTGTTTCTACTTTTCTTATTG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTCCTTAACGTCAGCATAGTGTTTGCTGTTTCTACTTTTCTTATTG  791

seq1  ATGTTTTTAGTCTTTGTGATATATTCCTAATACCATTCACTATTCTGATG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTTAGTCTTTGTGATATATTCCTAATACCATTCACTATTCTGATG  841

seq1  TCTATTTCACTCAGTTCCTTTAAAGCAATTTTGTAAATACTATTAATAAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTCACTCAGTTCCTTTAAAGCAATTTTGTAAATACTATTAATAAA  891

seq1  TTCTGAGACAGACTCTTCTTACACAGCTCTGTTTGGCAGACACCTCAAGA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGACAGACTCTTCTTACACAGCTCTGTTTGGCAGACACCTCAAGA  941

seq1  CTCCTTAGCTCATCTCTGGTTATGAGATGTGCAGACACGTACTACCATAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTAGCTCATCTCTGGTTATGAGATGTGCAGACACGTACTACCATAT  991

seq1  CTAATTTAAAACAATTAATTTGAATTAAGTTTCTTATCAAGAAGTTTGTA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTAAAACAATTAATTTGAATTAAGTTTCTTATCAAGAAGTTTGTA  1041

seq1  GATATCTTAATATGTATGTATAATGGGGAGTTCAATAAGAAAGGTCATTC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATCTTAATATGTATGTATAATGGGGAGTTCAATAAGAAAGGTCATTC  1091

seq1  ACTATACTGTTTCTTGTGGTAGCCAGAGTGCGTTTTCTGTTGGAATTC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATACTGTTTCTTGTGGTAGCCAGAGTGCGTTTTCTGTTGGAATTC  1139


seq1: chr8_30678573_30679744
seq2: B6Ng01-250L05.g_66_1244

seq1  GAATTCACTATTTCAAAGGCTTTAAAGAATGGGGTGTGAAATCTTCTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTATTTCAAAGGCTTTAAAGAATGGGGTGTGAAATCTTCTCCC  50

seq1  TAGTGTACAGATAGGTGTGACTGTAATTTTAGCTGTAATATATACTCAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTACAGATAGGTGTGACTGTAATTTTAGCTGTAATATATACTCAGC  100

seq1  AGCACAAAACTACTTTTTTATTTTTAATATCATTTTTCATATTCTTGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAAAACTACTTTTTTATTTTTAATATCATTTTTCATATTCTTGAAC  150

seq1  ATCTATTTCTAAATAAAGGGAAAAGGGGTGTTGATTTAATCCCAAAATCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATTTCTAAATAAAGGGAAAAGGGGTGTTGATTTAATCCCAAAATCG  200

seq1  CAGACAACTTTTACAAGAAAAATATTTTTCAAGTCATTTGCTGGCAACTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAACTTTTACAAGAAAAATATTTTTCAAGTCATTTGCTGGCAACTA  250

seq1  TACCATACTAGCTGCTGGCAATTTTGCTACCTTGCCAAAGACTGAGAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATACTAGCTGCTGGCAATTTTGCTACCTTGCCAAAGACTGAGAATA  300

seq1  AAGTGTGGAAAAACATATTCAAAACAGAAGCCAATATGTTAACTTTAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTGGAAAAACATATTCAAAACAGAAGCCAATATGTTAACTTTAAAA  350

seq1  TGCATAGAGAGAAATGAAACAAAAGTCTTTACTATATGCTGAAGGTTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAGAGAGAAATGAAACAAAAGTCTTTACTATATGCTGAAGGTTATA  400

seq1  GAAAATATTAGGAATTGAAAGATATTGCTAGGATCTGAAGTCTGGAATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATATTAGGAATTGAAAGATATTGCTAGGATCTGAAGTCTGGAATAC  450

seq1  CTGCCTGTTGTAAAGATAGAACAAAGTATAAAGGAATCCTTCCATTATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGTTGTAAAGATAGAACAAAGTATAAAGGAATCCTTCCATTATAA  500

seq1  AAAGATGTCTTAGGGTTTCCATTGCTGTGAAGAGTCATGGCTAAGTCAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGTCTTAGGGTTTCCATTGCTGTGAAGAGTCATGGCTAAGTCAAC  550

seq1  GAGATGGCTTACAGGTTCAGAGGTTCCCTTCATTATCAGCATGCCAGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGGCTTACAGGTTCAGAGGTTCCCTTCATTATCAGCATGCCAGTGT  600

seq1  CCAGGCAAGGACTGAGAGTTCTTTATCTTGTTCCAAAGGCAAACAGAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCAAGGACTGAGAGTTCTTTATCTTGTTCCAAAGGCAAACAGAAGA  650

seq1  GTGGCATGACAGTTAGGAAGAGGGTCTCCAAGCCCATTCTCAAAATAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCATGACAGTTAGGAAGAGGGTCTCCAAGCCCATTCTCAAAATAACA  700

seq1  CACTTCCCTCAAAGCCACACCTACTCCAACAAGGACATACCTAATATTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCCCTCAAAGCCACACCTACTCCAACAAGGACATACCTAATATTGC  750

seq1  CACACCCTGGACCAAGCATAATCAAACCACCCCACTGGATGGCTCCTCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCCTGGACCAAGCATAATCAAACCACCCCACTGGATGGCTCCTCAG  800

seq1  ACAGTGCTAATGGGAAATATTTCCTATTACCACGTATGCTAGAAGTACCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGCTAATGGGAAATATTTCCTATTACCACGTATGCTAGAAGTACCA  850

seq1  TGAACTGCATCATAACACTCTCAGAAGTAGCTAATCACCTCCTGTAATAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTGCATCATAACACTCTCAGAAGTAGCTAATCACCTCCTGTAATAT  900

seq1  GCATCTTGCATGAGGCTGAAAAGATAAAAAAAAAATAGAAAAGACCTGAA  950
      ||||||||||||| ||||||||||| ||||||||||||||||||||||||
seq2  GCATCTTGCATGA-GCTGAAAAGAT-AAAAAAAAATAGAAAAGACCTGAA  948

seq1  TTTATGTGAAGT-CCTTGCTA-TTTCAATGTC-TACTTCAAAAGAAGAA-  996
      |||||||||||| |||||||| ||||| |||| |||||||||||||||| 
seq2  TTTATGTGAAGTCCCTTGCTATTTTCATTGTCTTACTTCAAAAGAAGAAT  998

seq1  TTTCCA--TATAAATGATCATTTGATATAGGTTGACATGA--CCCTCCA-  1041
      ||||||  ||||||||||||||||| |   ||||||||||  || |||| 
seq2  TTTCCAATTATAAATGATCATTTGAAAATAGTTGACATGAACCCTTCCAT  1048

seq1  TTTGGGGACATCAAAAATGCTGTTC-TTTAT--GCTTATCGGGTCATTGA  1088
      |||||||||||| |||||||||||| |||||   |||||  ||||| |||
seq2  TTTGGGGACATC-AAAATGCTGTTCTTTTATTGCCTTATTCGGTCA-TGA  1096

seq1  CACTCAAGAACA-TTGCATGTCAAACATG-CATGCATGTTCCTTGGTCAA  1136
      |||   |||||| ||||||||| |||||| ||||||||| | | | || |
seq2  CACCTCAGAACATTTGCATGTCCAACATGCCATGCATGTCCTTAGATCCA  1146

seq1  GGGAGTTGGTTGCTCACACATAACTTGTGCTCTGTG  1172
      ||||  |||||||||||||   |||||||| |||||
seq2  GGGAAGTGGTTGCTCACAC--TACTTGTGC-CTGTG  1179


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