BAC Information

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BAC

Clone NameB6Ng01-250P15
Chromosome8 (Build37)
Map Location 74,369,131 - 74,369,763
singlet/doubletsinglet
Overlap geneLOC385024
Upstream geneKcnn1, LOC100042011, Ccdc124, Slc5a5, Rpl18a, Snora68, Mtap1s, LOC100042057, LOC665858, LOC384645, LOC100041583, EG621377, 2410004L22Rik, Myo9b, 2010315L10Rik, Ocel1, Nr2f6, Ushbp1, 5430437P03Rik, Ankrd41, Abhd8, Mrpl34, 1500034J01Rik, Tmem16h, Gtpbp3, Plvap, LOC665928, Bst2, 1110012M11Rik, BC033932, Txnl6, Slc27a1, Pgls, Bcnp1, Glt25d1, Unc13a, Jak3, Insl3, B3gnt3, LOC100042289, Fcho1, EG665991, LOC665996
Downstream geneLOC675190, Zfp709, LOC670453, Zfp617, BC049349, Cyp4f18, LOC666033, Olfr372, Olfr373, Olfr374, Tpm4, Rab8a, Hsh2d, Cib3, 2510049I19Rik, Ap1m1, LOC384840, LOC100042405, Klf2, Eps15l1, Calr3, LOC100042421, 1700030K09Rik, Cherp, Slc35e1, Crsp7, LOC100042439, 9130011J15Rik, Tmem38a, Nwd1, Sin3b, F2rl3, Large
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250P15.bB6Ng01-250P15.g
ACCGA058369GA058370
length9431,237
definitionB6Ng01-250P15.b B6Ng01-250P15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtaaggctttgaaaagccaataaatcttaaatggacatccatg
tgcatagctaatcccagcaggctctttttccaaactgcagagttggttct
tggaaatggtgggtgaatacagtgttcatgttcctatgaactaaactgag
caagtttccaagctaaaaaatatattcataatgttgtgggacttgtaaga
cacagctctcaaagtactcacaacaagaatttgcttcttatctttgaatt
tacctactattaaggaattgttaaaccttaccaggacaaaggcctttcct
cttcaaaatataagacttctgaaaagaaaaaccaaatatgttttattaca
actatagaaaaacattacatataaaagcgatcagactcattgttagtatc
aatttctatgagaccaatctagagactattcaagagtaaatattcacttt
tagcgaattactttgcatagacctattcattccctgtatatttcaaattg
aagatgacaataatttatcaaacattaatgcctaaaaataaatacacata
cacatttctgatgatcctcaatgaactctctcagcctgatagagagcaca
atccagaataaacaactgtttcaaaaataactttttttttccatttttta
ttaggtatttagctcatttacatttccaatgctataccaaaagtccccca
tacccacccacccccactcccctacctgcccactcccccttttttggccc
tggcgttcccctgttctggggcatataaagtttgtgtgtccaatgggcct
ctctttccagtgatggccgactaggccatctttttgatacatatgcagct
agagtcaagagctccagggtactggttagttcataatgttgatccaccta
taggttgcagatcctttagctccttgggtactttctttagctc
gaattcatttttattggatattttctttatttacatttcaaatgttatcc
ccttttctggttccctccctgcacccccccccaaaaaagccctcattcca
gaaatttaaaagtacacctgaaagctctagaacaagaagaagaaaataca
cccaagaggaggagatggcaggaatgaatcaaactcggggctgaaatcac
caaatagaaaaagagctatacaagggatcaaccaaatcaagagctggttc
tttgagaaaatcaacaagatagacaaacctttatccaaaataaaggcata
gagacagtatccaaataaccaaaatcagagatgataaaggagacataaca
atagacaatcagaaaattcaacaaattaataggttttattgaaagacctg
tatccacaaagttggaaaatcttaatgaaatggacttttttttttctaga
cagataccacttatcaaagttaaatcaagaccaggtaaactatttacaca
gtcctataatccctgaagaagtagaagcagtaaaagcctcacaaccagct
cttaccctcttgctctcttgcctctctcttcccccttgtgccccctctct
ctcactcccttcccctctctctccatgtgaccatggccagcccctatgtc
tctactctctccttctgtctgcctttctctaactctgctaccctcttcac
tcccctctccatgccctaaataagctctattctatactttaaaaaaaaaa
agtcttcataaccaaaaagcccaggaccagatgggttttagttgcagaaa
tctaccagaacttcaaagaagagctaatactcctcaaactagttcacaaa
atagaaacagaaggaacactgccaaactcattggtataagcaacagtcac
ccttgataccttaaccaagaagcccctgaacaatggaaagagacttcaag
accaattcctttataaagcattgatgccaaaattacttcaaggaaaagac
tcgccaaaacaatccagccagcacataaaaatattcacccccatcatggg
tcaagtgtagacttccatccagggatgtcaggaatgaatccattacactt
ggcctagggtttttctttttcctaagataaaatgttttttaaacacaaat
acgggtgtggatgggggtgccaaatcttagtgacatctaggaaaggcccc
taacctgaattgattcctttctcaagcagataggtgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_74369131_74369763
seq2: B6Ng01-250P15.b_48_680

seq1  GAATTCAGTAAGGCTTTGAAAAGCCAATAAATCTTAAATGGACATCCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAAGGCTTTGAAAAGCCAATAAATCTTAAATGGACATCCATG  50

seq1  TGCATAGCTAATCCCAGCAGGCTCTTTTTCCAAACTGCAGAGTTGGTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAGCTAATCCCAGCAGGCTCTTTTTCCAAACTGCAGAGTTGGTTCT  100

seq1  TGGAAATGGTGGGTGAATACAGTGTTCATGTTCCTATGAACTAAACTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAATGGTGGGTGAATACAGTGTTCATGTTCCTATGAACTAAACTGAG  150

seq1  CAAGTTTCCAAGCTAAAAAATATATTCATAATGTTGTGGGACTTGTAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTTCCAAGCTAAAAAATATATTCATAATGTTGTGGGACTTGTAAGA  200

seq1  CACAGCTCTCAAAGTACTCACAACAAGAATTTGCTTCTTATCTTTGAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCTCTCAAAGTACTCACAACAAGAATTTGCTTCTTATCTTTGAATT  250

seq1  TACCTACTATTAAGGAATTGTTAAACCTTACCAGGACAAAGGCCTTTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTACTATTAAGGAATTGTTAAACCTTACCAGGACAAAGGCCTTTCCT  300

seq1  CTTCAAAATATAAGACTTCTGAAAAGAAAAACCAAATATGTTTTATTACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAAATATAAGACTTCTGAAAAGAAAAACCAAATATGTTTTATTACA  350

seq1  ACTATAGAAAAACATTACATATAAAAGCGATCAGACTCATTGTTAGTATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATAGAAAAACATTACATATAAAAGCGATCAGACTCATTGTTAGTATC  400

seq1  AATTTCTATGAGACCAATCTAGAGACTATTCAAGAGTAAATATTCACTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTATGAGACCAATCTAGAGACTATTCAAGAGTAAATATTCACTTT  450

seq1  TAGCGAATTACTTTGCATAGACCTATTCATTCCCTGTATATTTCAAATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCGAATTACTTTGCATAGACCTATTCATTCCCTGTATATTTCAAATTG  500

seq1  AAGATGACAATAATTTATCAAACATTAATGCCTAAAAATAAATACACATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGACAATAATTTATCAAACATTAATGCCTAAAAATAAATACACATA  550

seq1  CACATTTCTGATGATCCTCAATGAACTCTCTCAGCCTGATAGAGAGCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTCTGATGATCCTCAATGAACTCTCTCAGCCTGATAGAGAGCACA  600

seq1  ATCCAGAATAAACAACTGTTTCAAAAATAACTT  633
      |||||||||||||||||||||||||||||||||
seq2  ATCCAGAATAAACAACTGTTTCAAAAATAACTT  633